EnhancerDB
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  3. vista19621[chr15:39006951-39007336]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19621[chr15:39006951-39007336]
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Tissue distribution of vista19621
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Transcription factor that possibly regulate vista19621[chr15:39006951-39007336]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 39007000 39007014 GLIS2 JASPAR yes 22835512
chr15 39007000 39007014 GLIS3 JASPAR yes 22835513
chr15 39007000 39007014 GLIS2 JASPAR yes 70506623
chr15 39007000 39007014 GLIS3 JASPAR yes 70506624
chr15 39007010 39007016 HiNF-A TRANSFAC yes 22835514
chr15 39007010 39007016 HiNF-A TRANSFAC yes 70506625
chr15 39007017 39007022 SP1 TRANSFAC yes 22835515
chr15 39007017 39007022 SP1 TRANSFAC yes 70506626
chr15 39007028 39007040 FOXI1 JASPAR yes 22835516
chr15 39007028 39007040 FOXI1 JASPAR yes 70506627
chr15 39007034 39007050 ZNF143 JASPAR yes 22835517
chr15 39007034 39007050 ZNF143 JASPAR yes 70506628
chr15 39007041 39007056 TFAP2A JASPAR yes 22835518
chr15 39007041 39007056 TFAP2A JASPAR yes 70506629
chr15 39007043 39007055 TFAP2A JASPAR yes 22835519
chr15 39007043 39007055 TFAP2B JASPAR yes 22835520
chr15 39007043 39007055 TFAP2C JASPAR yes 22835521
chr15 39007043 39007055 TFAP2A JASPAR yes 70506630
chr15 39007043 39007055 TFAP2B JASPAR yes 70506631
chr15 39007043 39007055 TFAP2C JASPAR yes 70506632
chr15 39007043 39007056 TFAP2A JASPAR yes 22835522
chr15 39007043 39007056 TFAP2B JASPAR yes 22835523
chr15 39007043 39007056 TFAP2C JASPAR yes 22835524
chr15 39007043 39007056 TFAP2A JASPAR yes 70506633
chr15 39007043 39007056 TFAP2B JASPAR yes 70506634
chr15 39007043 39007056 TFAP2C JASPAR yes 70506635
chr15 39007043 39007058 TFAP2A JASPAR yes 22835525
chr15 39007043 39007058 TFAP2C JASPAR yes 22835526
chr15 39007043 39007058 TFAP2A JASPAR yes 70506636
chr15 39007043 39007058 TFAP2C JASPAR yes 70506637
chr15 39007044 39007053 TFAP2A JASPAR yes 22835527
chr15 39007044 39007053 TFAP2A JASPAR yes 70506638
chr15 39007044 39007055 EBF1 JASPAR yes 22835528
chr15 39007044 39007055 EBF1 JASPAR yes 70506639
chr15 39007050 39007055 SP1 TRANSFAC yes 22835529
chr15 39007050 39007055 SP1 TRANSFAC yes 70506640
chr15 39007055 39007059 NFE TRANSFAC yes 22835530
chr15 39007055 39007059 NFE TRANSFAC yes 70506641
chr15 39007055 39007060 GATA1 TRANSFAC yes 22835531
chr15 39007055 39007060 GATA1 TRANSFAC yes 70506642
chr15 39007055 39007061 GATA3 JASPAR yes 22835532
chr15 39007055 39007061 GATA3 JASPAR yes 70506643
chr15 39007073 39007091 TP53 JASPAR yes 22835533
chr15 39007073 39007091 TP53 JASPAR yes 70506644
chr15 39007084 39007096 FOXI1 JASPAR yes 22835534
chr15 39007084 39007096 FOXI1 JASPAR yes 70506645
chr15 39007101 39007105 YY1 TRANSFAC yes 22835535
chr15 39007101 39007105 YY1 TRANSFAC yes 70506646
chr15 39007106 39007117 NFKB1 JASPAR yes 22835536
chr15 39007106 39007117 NFKB1 JASPAR yes 70506647
chr15 39007139 39007142 MYB TRANSFAC yes 22835537
chr15 39007139 39007142 MYB TRANSFAC yes 70506648
chr15 39007144 39007154 RELA JASPAR yes 22835538
chr15 39007144 39007154 REL JASPAR yes 22835539
chr15 39007144 39007154 RELA JASPAR yes 70506649
chr15 39007144 39007154 REL JASPAR yes 70506650
chr15 39007144 39007155 NFKB1 JASPAR yes 22835540
chr15 39007144 39007155 NFKB1 JASPAR yes 70506651
chr15 39007145 39007154 NF-kappaB TRANSFAC yes 22835541
chr15 39007145 39007154 NF-kappaB TRANSFAC yes 70506652
chr15 39007148 39007156 FEV JASPAR yes 22835542
chr15 39007148 39007156 FEV JASPAR yes 70506653
chr15 39007148 39007167 RFX2 JASPAR yes 22835543
chr15 39007148 39007167 RFX2 JASPAR yes 70506654
chr15 39007150 39007155 ETS2 TRANSFAC yes 22835544
chr15 39007150 39007155 ETS2 TRANSFAC yes 70506655
chr15 39007179 39007182 MYB TRANSFAC yes 22835545
chr15 39007179 39007182 MYB TRANSFAC yes 70506656
chr15 39007205 39007218 SMAD2 JASPAR yes 22835546
chr15 39007205 39007218 SMAD2 JASPAR yes 70506657
chr15 39007214 39007220 SOX10 JASPAR yes 22835547
chr15 39007214 39007220 SOX10 JASPAR yes 70506658
chr15 39007217 39007230 ZBTB18 JASPAR yes 22835548
chr15 39007217 39007230 ZBTB18 JASPAR yes 70506659
chr15 39007219 39007229 MYF6 JASPAR yes 22835549
chr15 39007219 39007229 MYF6 JASPAR yes 70506660
chr15 39007221 39007226 MYC TRANSFAC yes 22835550
chr15 39007221 39007226 MYC TRANSFAC yes 70506661
chr15 39007229 39007243 RORA JASPAR yes 22835551
chr15 39007229 39007243 RORA JASPAR yes 70506662
chr15 39007234 39007254 PPARG JASPAR yes 22835552
chr15 39007234 39007254 PPARG JASPAR yes 70506663
chr15 39007235 39007241 ESR1 TRANSFAC yes 22835553
chr15 39007235 39007241 ESR1 TRANSFAC yes 70506664
chr15 39007237 39007241 ESR1 TRANSFAC yes 22835554
chr15 39007237 39007241 ESR1 TRANSFAC yes 70506665
chr15 39007242 39007250 FEV JASPAR yes 22835555
chr15 39007242 39007250 FEV JASPAR yes 70506666
chr15 39007271 39007282 DUX4 JASPAR yes 22835556
chr15 39007271 39007282 DUX4 JASPAR yes 70506667
chr15 39007274 39007279 ETS2 TRANSFAC yes 22835557
chr15 39007274 39007279 ETS2 TRANSFAC yes 70506668
chr15 39007280 39007284 TEAD2 TRANSFAC yes 22835558
chr15 39007280 39007284 TEAD2 TRANSFAC yes 70506669
chr15 39007280 39007285 TBP TRANSFAC yes 22835559
chr15 39007280 39007285 TBP TRANSFAC yes 70506670
chr15 39007280 39007286 TFIID TRANSFAC yes 22835560
chr15 39007280 39007286 TFIID TRANSFAC yes 70506671
chr15 39007284 39007290 HiNF-A TRANSFAC yes 22835561
chr15 39007284 39007290 HiNF-A TRANSFAC yes 70506672
chr15 39007285 39007305 RREB1 JASPAR yes 22835562
chr15 39007285 39007305 RREB1 JASPAR yes 70506673
chr15 39007286 39007298 FOXI1 JASPAR yes 22835563
chr15 39007286 39007298 FOXI1 JASPAR yes 70506674
chr15 39007287 39007307 RREB1 JASPAR yes 22835564
chr15 39007287 39007307 RREB1 JASPAR yes 70506675
chr15 39007290 39007296 HiNF-A TRANSFAC yes 22835565
chr15 39007290 39007296 HiNF-A TRANSFAC yes 70506676
chr15 39007302 39007306 TEAD2 TRANSFAC yes 22835566
chr15 39007302 39007306 TEAD2 TRANSFAC yes 70506677
chr15 39007302 39007307 TBP TRANSFAC yes 22835567
chr15 39007302 39007307 TBP TRANSFAC yes 70506678
chr15 39007302 39007308 TFIID TRANSFAC yes 22835568
chr15 39007302 39007308 TFIID TRANSFAC yes 70506679
chr15 39007304 39007319 HSF1 JASPAR yes 22835569
chr15 39007304 39007319 HSF1 JASPAR yes 70506680
chr15 39007305 39007318 HSF1 JASPAR yes 22835570
chr15 39007305 39007318 HSF2 JASPAR yes 22835571
chr15 39007305 39007318 HSF4 JASPAR yes 22835572
chr15 39007305 39007318 HSF1 JASPAR yes 70506681
chr15 39007305 39007318 HSF2 JASPAR yes 70506682
chr15 39007305 39007318 HSF4 JASPAR yes 70506683
chr15 39007310 39007323 HSF2 JASPAR yes 22835573
chr15 39007310 39007323 HSF2 JASPAR yes 70506684
chr15 39007312 39007322 TEAD4 JASPAR yes 22835574
chr15 39007312 39007322 TEAD4 JASPAR yes 70506685
SNP sites on vista19621[chr15:39006951-39007336]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 39007048 rs143445493 C G
EBF1 TFAP2A TFAP2B TFAP2C ZNF143
3899768
chr15 39007170 rs2643205 C T no 3899769
chr15 39007171 rs2643204 C T no 3899770
chr15 39007213 rs78917898 A G
SMAD2
3899771
chr15 39007273 rs2643203 G A
DUX4
3899772
Genes possibly regulated by vista19621[chr15:39006951-39007336]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 38988799 38992239 + C15orf53 ENSG00000175779.1 38988799 0.94 0.0 13793 81848
Expression level of Genes
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miRNAs possibly regulated by vista19621[chr15:39006951-39007336]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results