EnhancerDB
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  3. vista19649[chr15:39448976-39449310]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19649[chr15:39448976-39449310]
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Tissue distribution of vista19649
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Transcription factor that possibly regulate vista19649[chr15:39448976-39449310]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 39448993 39448998 GATA2 JASPAR yes 22859317
chr15 39448993 39448998 GATA2 JASPAR yes 70507828
chr15 39448995 39449002 NKX3-1 JASPAR yes 22859318
chr15 39448995 39449002 NKX3-1 JASPAR yes 70507829
chr15 39448996 39449007 NFIL3 JASPAR yes 22859319
chr15 39448996 39449007 NFIL3 JASPAR yes 70507830
chr15 39448999 39449014 FOXA1 JASPAR yes 22859320
chr15 39448999 39449014 FOXA1 JASPAR yes 70507831
chr15 39449000 39449011 FOXB1 JASPAR yes 22859321
chr15 39449000 39449011 FOXC1 JASPAR yes 22859322
chr15 39449000 39449011 FOXB1 JASPAR yes 70507832
chr15 39449000 39449011 FOXC1 JASPAR yes 70507833
chr15 39449000 39449012 FOXC2 JASPAR yes 22859323
chr15 39449000 39449012 FOXC2 JASPAR yes 70507834
chr15 39449001 39449013 FOXI1 JASPAR yes 22859324
chr15 39449001 39449013 FOXI1 JASPAR yes 70507835
chr15 39449002 39449006 TEAD2 TRANSFAC yes 22859325
chr15 39449002 39449006 TEAD2 TRANSFAC yes 70507836
chr15 39449002 39449007 TBP TRANSFAC yes 22859326
chr15 39449002 39449007 TBP TRANSFAC yes 70507837
chr15 39449003 39449011 FOXG1 JASPAR yes 22859327
chr15 39449003 39449011 FOXG1 JASPAR yes 70507838
chr15 39449005 39449020 LEF1 JASPAR yes 22859328
chr15 39449005 39449020 LEF1 JASPAR yes 70507839
chr15 39449024 39449028 YY1 TRANSFAC yes 22859329
chr15 39449024 39449028 YY1 TRANSFAC yes 70507840
chr15 39449067 39449072 GATA2 JASPAR yes 22859330
chr15 39449067 39449072 GATA2 JASPAR yes 70507841
chr15 39449070 39449074 YY1 TRANSFAC yes 22859331
chr15 39449070 39449074 YY1 TRANSFAC yes 70507842
chr15 39449083 39449097 GATA2 JASPAR yes 22859332
chr15 39449083 39449097 GATA2 JASPAR yes 70507843
chr15 39449084 39449098 SPI1 JASPAR yes 22859333
chr15 39449084 39449098 SPIC JASPAR yes 22859334
chr15 39449084 39449098 SPI1 JASPAR yes 70507844
chr15 39449084 39449098 SPIC JASPAR yes 70507845
chr15 39449085 39449093 GATA3 JASPAR yes 22859335
chr15 39449085 39449093 GATA5 JASPAR yes 22859336
chr15 39449085 39449093 GATA3 JASPAR yes 70507846
chr15 39449085 39449093 GATA5 JASPAR yes 70507847
chr15 39449087 39449098 ELF5 JASPAR yes 22859337
chr15 39449087 39449098 ELF5 JASPAR yes 70507848
chr15 39449089 39449094 ETS2 TRANSFAC yes 22859338
chr15 39449089 39449094 ETS2 TRANSFAC yes 70507849
chr15 39449089 39449097 FEV JASPAR yes 22859339
chr15 39449089 39449097 FEV JASPAR yes 70507850
chr15 39449090 39449097 SPI1 JASPAR yes 22859340
chr15 39449090 39449097 SPI1 JASPAR yes 70507851
chr15 39449106 39449110 NFE TRANSFAC yes 22859341
chr15 39449106 39449110 NFE TRANSFAC yes 70507852
chr15 39449138 39449143 GATA2 JASPAR yes 22859342
chr15 39449138 39449143 GATA2 JASPAR yes 70507853
chr15 39449146 39449157 NFKB1 JASPAR yes 22859343
chr15 39449146 39449157 NFKB1 JASPAR yes 70507854
chr15 39449151 39449167 SRF JASPAR yes 22859344
chr15 39449151 39449167 SRF JASPAR yes 70507855
chr15 39449151 39449169 SRF JASPAR yes 22859345
chr15 39449151 39449169 SRF JASPAR yes 70507856
chr15 39449162 39449177 LEF1 JASPAR yes 22859346
chr15 39449162 39449177 LEF1 JASPAR yes 70507857
chr15 39449174 39449189 PRDM1 JASPAR yes 22859347
chr15 39449174 39449189 PRDM1 JASPAR yes 70507858
chr15 39449178 39449191 NFKB1 JASPAR yes 22859348
chr15 39449178 39449191 NFKB2 JASPAR yes 22859349
chr15 39449178 39449191 NFKB1 JASPAR yes 70507859
chr15 39449178 39449191 NFKB2 JASPAR yes 70507860
chr15 39449179 39449189 NFKB1 JASPAR yes 22859350
chr15 39449179 39449189 RELA JASPAR yes 22859351
chr15 39449179 39449189 REL JASPAR yes 22859352
chr15 39449179 39449189 NFKB1 JASPAR yes 70507861
chr15 39449179 39449189 RELA JASPAR yes 70507862
chr15 39449179 39449189 REL JASPAR yes 70507863
chr15 39449179 39449190 NFKB1 JASPAR yes 22859353
chr15 39449179 39449190 NFKB1 JASPAR yes 70507864
chr15 39449179 39449192 NFKB2 JASPAR yes 22859354
chr15 39449179 39449192 NFKB2 JASPAR yes 70507865
chr15 39449180 39449190 NFKB1 JASPAR yes 22859355
chr15 39449180 39449190 RELA JASPAR yes 22859356
chr15 39449180 39449190 REL JASPAR yes 22859357
chr15 39449180 39449190 NFKB1 JASPAR yes 70507866
chr15 39449180 39449190 RELA JASPAR yes 70507867
chr15 39449180 39449190 REL JASPAR yes 70507868
chr15 39449180 39449191 NFKB1 JASPAR yes 22859358
chr15 39449180 39449191 NFKB1 JASPAR yes 70507869
chr15 39449181 39449191 REL JASPAR yes 22859359
chr15 39449181 39449191 REL JASPAR yes 70507870
chr15 39449184 39449202 SRF JASPAR yes 22859360
chr15 39449184 39449202 SRF JASPAR yes 70507871
chr15 39449186 39449192 MZF1 JASPAR yes 22859361
chr15 39449186 39449192 MZF1 JASPAR yes 70507872
chr15 39449186 39449202 SRF JASPAR yes 22859362
chr15 39449186 39449202 SRF JASPAR yes 70507873
chr15 39449187 39449199 SRF JASPAR yes 22859363
chr15 39449187 39449199 SRF JASPAR yes 70507874
chr15 39449200 39449214 RORA JASPAR yes 22859364
chr15 39449200 39449214 RORA JASPAR yes 70507875
chr15 39449206 39449226 TP53 JASPAR yes 22859365
chr15 39449206 39449226 TP53 JASPAR yes 70507876
chr15 39449233 39449242 THAP1 JASPAR yes 22859366
chr15 39449233 39449242 THAP1 JASPAR yes 70507877
chr15 39449246 39449262 NFYA JASPAR yes 22859367
chr15 39449246 39449262 NFYA JASPAR yes 70507878
chr15 39449251 39449255 H1TF2 TRANSFAC yes 22859368
chr15 39449251 39449255 NFE TRANSFAC yes 22859369
chr15 39449251 39449255 SRF TRANSFAC yes 22859370
chr15 39449251 39449255 H1TF2 TRANSFAC yes 70507879
chr15 39449251 39449255 NFE TRANSFAC yes 70507880
chr15 39449251 39449255 SRF TRANSFAC yes 70507881
chr15 39449256 39449266 SREBF1 JASPAR yes 22859371
chr15 39449256 39449266 SREBF2 JASPAR yes 22859372
chr15 39449256 39449266 SREBF1 JASPAR yes 70507882
chr15 39449256 39449266 SREBF2 JASPAR yes 70507883
chr15 39449257 39449278 REST JASPAR yes 22859373
chr15 39449257 39449278 REST JASPAR yes 70507884
chr15 39449258 39449277 REST JASPAR yes 22859374
chr15 39449258 39449277 REST JASPAR yes 70507885
chr15 39449260 39449271 ESRRA JASPAR yes 22859375
chr15 39449260 39449271 ESRRA JASPAR yes 70507886
chr15 39449263 39449278 TFAP2C JASPAR yes 22859376
chr15 39449263 39449278 TFAP2C JASPAR yes 70507887
chr15 39449270 39449291 IRF1 JASPAR yes 22859377
chr15 39449270 39449291 IRF1 JASPAR yes 70507888
chr15 39449291 39449297 NFIC JASPAR yes 22859378
chr15 39449291 39449297 NFIC JASPAR yes 70507889
chr15 39449308 39449321 NR2F1 JASPAR yes 22859379
chr15 39449308 39449321 NR2F1 JASPAR yes 70507890
SNP sites on vista19649[chr15:39448976-39449310]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 39448998 rs116533723 A T
GATA2 NFIL3 NKX3-1
3902871
chr15 39449003 rs275177 T C
FOXA1 FOXB1 FOXC1 FOXC2 FOXG1 FOXI1 NFIL3 TBP TEAD2
3902872
chr15 39449131 rs73401709 T C no 3902873
chr15 39449173 rs144309973 G A
LEF1
3902874
chr15 39449206 rs148731160 T C
RORA TP53
3902875
chr15 39449236 rs116306380 G T
THAP1
3902876
chr15 39449256 rs7172086 T C
NFYA SREBF1 SREBF2
3902877
Genes possibly regulated by vista19649[chr15:39448976-39449310]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 39542885 39547046 + C15orf54 ENSG00000175746.4 39542885 0.96 0.99 13794 6425
Expression level of Genes
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miRNAs possibly regulated by vista19649[chr15:39448976-39449310]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results