EnhancerDB
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  3. vista19660[chr15:39553586-39553959]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19660[chr15:39553586-39553959]
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Tissue distribution of vista19660
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Transcription factor that possibly regulate vista19660[chr15:39553586-39553959]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 39553588 39553597 SRY JASPAR yes 22870325
chr15 39553588 39553597 SRY JASPAR yes 70508368
chr15 39553590 39553599 SOX9 JASPAR yes 22870326
chr15 39553590 39553599 SOX9 JASPAR yes 70508369
chr15 39553608 39553614 NFIC JASPAR yes 22870327
chr15 39553608 39553614 NFIC JASPAR yes 70508370
chr15 39553613 39553618 ETS2 TRANSFAC yes 22870328
chr15 39553613 39553618 ETS2 TRANSFAC yes 70508371
chr15 39553620 39553630 POU6F1 JASPAR yes 22870329
chr15 39553620 39553630 POU6F1 JASPAR yes 70508372
chr15 39553622 39553632 PAX7 JASPAR yes 22870330
chr15 39553622 39553632 PAX7 JASPAR yes 70508373
chr15 39553655 39553663 FOXL1 JASPAR yes 22870331
chr15 39553655 39553663 FOXL1 JASPAR yes 70508374
chr15 39553661 39553666 ETS2 TRANSFAC yes 22870332
chr15 39553661 39553666 ETS2 TRANSFAC yes 70508375
chr15 39553661 39553669 FEV JASPAR yes 22870333
chr15 39553661 39553669 FEV JASPAR yes 70508376
chr15 39553673 39553683 REL JASPAR yes 22870334
chr15 39553673 39553683 REL JASPAR yes 70508377
chr15 39553678 39553694 T JASPAR yes 22870335
chr15 39553678 39553694 T JASPAR yes 70508378
chr15 39553720 39553725 H4TF1 TRANSFAC yes 22870336
chr15 39553720 39553725 H4TF1 TRANSFAC yes 70508379
chr15 39553721 39553736 MEF2C JASPAR yes 22870337
chr15 39553721 39553736 MEF2C JASPAR yes 70508380
chr15 39553722 39553737 MEF2A JASPAR yes 22870338
chr15 39553722 39553737 MEF2A JASPAR yes 70508381
chr15 39553723 39553735 MEF2A JASPAR yes 22870339
chr15 39553723 39553735 MEF2D JASPAR yes 22870340
chr15 39553723 39553735 MEF2A JASPAR yes 70508382
chr15 39553723 39553735 MEF2D JASPAR yes 70508383
chr15 39553724 39553734 MEF2A JASPAR yes 22870341
chr15 39553724 39553734 MEF2A JASPAR yes 70508384
chr15 39553747 39553756 SRY JASPAR yes 22870342
chr15 39553747 39553756 SRY JASPAR yes 70508385
chr15 39553749 39553752 MYB TRANSFAC yes 22870343
chr15 39553749 39553752 MYB TRANSFAC yes 70508386
chr15 39553749 39553758 SOX9 JASPAR yes 22870344
chr15 39553749 39553758 SOX9 JASPAR yes 70508387
chr15 39553777 39553792 FOXP1 JASPAR yes 22870345
chr15 39553777 39553792 FOXP1 JASPAR yes 70508388
chr15 39553778 39553789 FOXA1 JASPAR yes 22870346
chr15 39553778 39553789 FOXA1 JASPAR yes 70508389
chr15 39553779 39553790 FOXC1 JASPAR yes 22870347
chr15 39553779 39553790 FOXC1 JASPAR yes 70508390
chr15 39553779 39553791 FOXC2 JASPAR yes 22870348
chr15 39553779 39553791 FOXC2 JASPAR yes 70508391
chr15 39553780 39553791 FOXP2 JASPAR yes 22870349
chr15 39553780 39553791 FOXP2 JASPAR yes 70508392
chr15 39553787 39553801 GATA2 JASPAR yes 22870350
chr15 39553787 39553801 GATA2 JASPAR yes 70508393
chr15 39553789 39553797 GATA3 JASPAR yes 22870351
chr15 39553789 39553797 GATA5 JASPAR yes 22870352
chr15 39553789 39553797 GATA3 JASPAR yes 70508394
chr15 39553789 39553797 GATA5 JASPAR yes 70508395
chr15 39553798 39553813 FOXP1 JASPAR yes 22870353
chr15 39553798 39553813 FOXP1 JASPAR yes 70508396
chr15 39553807 39553813 SOX10 JASPAR yes 22870354
chr15 39553807 39553813 SOX10 JASPAR yes 70508397
chr15 39553816 39553829 HSF2 JASPAR yes 22870355
chr15 39553816 39553829 HSF2 JASPAR yes 70508398
chr15 39553854 39553862 DLX6 JASPAR yes 22870356
chr15 39553854 39553862 MSX2 JASPAR yes 22870357
chr15 39553854 39553862 DLX6 JASPAR yes 70508399
chr15 39553854 39553862 MSX2 JASPAR yes 70508400
chr15 39553855 39553866 PHOX2A JASPAR yes 22870358
chr15 39553855 39553866 PHOX2A JASPAR yes 70508401
chr15 39553860 39553865 GATA2 JASPAR yes 22870359
chr15 39553860 39553865 GATA2 JASPAR yes 70508402
chr15 39553876 39553897 IRF1 JASPAR yes 22870360
chr15 39553876 39553897 IRF1 JASPAR yes 70508403
chr15 39553879 39553893 SPIC JASPAR yes 22870361
chr15 39553879 39553893 SPIC JASPAR yes 70508404
chr15 39553885 39553901 POU4F2 JASPAR yes 22870362
chr15 39553885 39553901 POU4F3 JASPAR yes 22870363
chr15 39553885 39553901 POU4F2 JASPAR yes 70508405
chr15 39553885 39553901 POU4F3 JASPAR yes 70508406
chr15 39553894 39553898 TEAD2 TRANSFAC yes 22870364
chr15 39553894 39553898 TEAD2 TRANSFAC yes 70508407
chr15 39553894 39553899 TBP TRANSFAC yes 22870365
chr15 39553894 39553899 TBP TRANSFAC yes 70508408
chr15 39553894 39553900 TMF TRANSFAC yes 22870366
chr15 39553894 39553900 TMF TRANSFAC yes 70508409
chr15 39553932 39553937 GATA2 JASPAR yes 22870367
chr15 39553932 39553937 GATA2 JASPAR yes 70508410
chr15 39553933 39553939 ZNF354C JASPAR yes 22870368
chr15 39553933 39553939 ZNF354C JASPAR yes 70508411
chr15 39553937 39553943 SOX10 JASPAR yes 22870369
chr15 39553937 39553943 SOX10 JASPAR yes 70508412
chr15 39553946 39553961 FOXP1 JASPAR yes 22870370
chr15 39553946 39553961 FOXP1 JASPAR yes 70508413
chr15 39553950 39553958 FOXO3 JASPAR yes 22870371
chr15 39553950 39553958 FOXO3 JASPAR yes 70508414
chr15 39553958 39553970 IRF1 JASPAR yes 22870372
chr15 39553958 39553970 IRF1 JASPAR yes 70508415
SNP sites on vista19660[chr15:39553586-39553959]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 39553621 rs11387498 A AG
POU6F1
3903958
chr15 39553626 rs199928045 T C
PAX7 POU6F1
3903959
chr15 39553808 rs571549734 A G
FOXP1 SOX10
3903960
Genes possibly regulated by vista19660[chr15:39553586-39553959]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 39542885 39547046 + C15orf54 ENSG00000175746.4 39542885 0.96 0.99 13794 89299
Expression level of Genes
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miRNAs possibly regulated by vista19660[chr15:39553586-39553959]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results