EnhancerDB
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  3. vista19662[chr15:39559889-39560120]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19662[chr15:39559889-39560120]
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Tissue distribution of vista19662
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Transcription factor that possibly regulate vista19662[chr15:39559889-39560120]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 39559877 39559891 TCF7L2 JASPAR yes 22870910
chr15 39559877 39559891 TCF7L2 JASPAR yes 70508457
chr15 39559877 39559892 HNF4G JASPAR yes 22870911
chr15 39559877 39559892 LEF1 JASPAR yes 22870912
chr15 39559877 39559892 NR2C2 JASPAR yes 22870913
chr15 39559877 39559892 HNF4G JASPAR yes 70508458
chr15 39559877 39559892 LEF1 JASPAR yes 70508459
chr15 39559877 39559892 NR2C2 JASPAR yes 70508460
chr15 39559878 39559892 RXRB JASPAR yes 22870914
chr15 39559878 39559892 RXRG JASPAR yes 22870915
chr15 39559878 39559892 RXRB JASPAR yes 70508461
chr15 39559878 39559892 RXRG JASPAR yes 70508462
chr15 39559904 39559915 FOSL2 JASPAR yes 22870916
chr15 39559904 39559915 JUNB JASPAR yes 22870917
chr15 39559904 39559915 FOSL2 JASPAR yes 70508463
chr15 39559904 39559915 JUNB JASPAR yes 70508464
chr15 39559904 39559918 JUN JASPAR yes 22870918
chr15 39559904 39559918 JUN JASPAR yes 70508465
chr15 39559905 39559911 JUN TRANSFAC yes 22870919
chr15 39559905 39559911 JUN TRANSFAC yes 70508466
chr15 39559919 39559923 YY1 TRANSFAC yes 22870920
chr15 39559919 39559923 YY1 TRANSFAC yes 70508467
chr15 39559930 39559946 POU4F3 JASPAR yes 22870921
chr15 39559930 39559946 POU4F3 JASPAR yes 70508468
chr15 39559932 39559946 POU4F1 JASPAR yes 22870922
chr15 39559932 39559946 POU4F1 JASPAR yes 70508469
chr15 39559933 39559945 HNF1B JASPAR yes 22870923
chr15 39559933 39559945 HNF1B JASPAR yes 70508470
chr15 39559945 39559950 GATA2 JASPAR yes 22870924
chr15 39559945 39559950 GATA2 JASPAR yes 70508471
chr15 39559973 39559977 YY1 TRANSFAC yes 22870925
chr15 39559973 39559977 YY1 TRANSFAC yes 70508472
chr15 39559991 39559999 SF1 TRANSFAC yes 22870926
chr15 39559991 39559999 SF1 TRANSFAC yes 70508473
chr15 39559997 39560000 MYB TRANSFAC yes 22870927
chr15 39559997 39560000 MYB TRANSFAC yes 70508474
chr15 39560037 39560058 IRF1 JASPAR yes 22870928
chr15 39560037 39560058 IRF1 JASPAR yes 70508475
chr15 39560039 39560054 IRF9 JASPAR yes 22870929
chr15 39560039 39560054 IRF9 JASPAR yes 70508476
chr15 39560040 39560054 IRF7 JASPAR yes 22870930
chr15 39560040 39560054 IRF8 JASPAR yes 22870931
chr15 39560040 39560054 IRF7 JASPAR yes 70508477
chr15 39560040 39560054 IRF8 JASPAR yes 70508478
chr15 39560041 39560055 STAT1 JASPAR yes 22870932
chr15 39560041 39560055 STAT1 JASPAR yes 70508479
chr15 39560041 39560056 STAT2 JASPAR yes 22870933
chr15 39560041 39560056 STAT2 JASPAR yes 70508480
chr15 39560043 39560064 IRF1 JASPAR yes 22870934
chr15 39560043 39560064 IRF1 JASPAR yes 70508481
chr15 39560047 39560061 SPIC JASPAR yes 22870935
chr15 39560047 39560061 SPIC JASPAR yes 70508482
chr15 39560048 39560061 ELF1 JASPAR yes 22870936
chr15 39560048 39560061 ELF1 JASPAR yes 70508483
chr15 39560049 39560061 EHF JASPAR yes 22870937
chr15 39560049 39560061 ELF1 JASPAR yes 22870938
chr15 39560049 39560061 ELF4 JASPAR yes 22870939
chr15 39560049 39560061 EHF JASPAR yes 70508484
chr15 39560049 39560061 ELF1 JASPAR yes 70508485
chr15 39560049 39560061 ELF4 JASPAR yes 70508486
chr15 39560049 39560062 ELF3 JASPAR yes 22870940
chr15 39560049 39560062 ELF3 JASPAR yes 70508487
chr15 39560050 39560061 ELF5 JASPAR yes 22870941
chr15 39560050 39560061 ETV2 JASPAR yes 22870942
chr15 39560050 39560061 ELF5 JASPAR yes 70508488
chr15 39560050 39560061 ETV2 JASPAR yes 70508489
chr15 39560051 39560061 ERF JASPAR yes 22870943
chr15 39560051 39560061 ERG JASPAR yes 22870944
chr15 39560051 39560061 ETS1 JASPAR yes 22870945
chr15 39560051 39560061 FEV JASPAR yes 22870946
chr15 39560051 39560061 FLI1 JASPAR yes 22870947
chr15 39560051 39560061 ERF JASPAR yes 70508490
chr15 39560051 39560061 ERG JASPAR yes 70508491
chr15 39560051 39560061 ETS1 JASPAR yes 70508492
chr15 39560051 39560061 FEV JASPAR yes 70508493
chr15 39560051 39560061 FLI1 JASPAR yes 70508494
chr15 39560051 39560062 ELK4 JASPAR yes 22870948
chr15 39560051 39560062 FLI1 JASPAR yes 22870949
chr15 39560051 39560062 ELK4 JASPAR yes 70508495
chr15 39560051 39560062 FLI1 JASPAR yes 70508496
chr15 39560052 39560060 FEV JASPAR yes 22870950
chr15 39560052 39560060 FEV JASPAR yes 70508497
chr15 39560059 39560071 TGIF1 JASPAR yes 22870951
chr15 39560059 39560071 TGIF1 JASPAR yes 70508498
chr15 39560107 39560127 TP53 JASPAR yes 22870952
chr15 39560107 39560127 TP53 JASPAR yes 70508499
chr15 39560119 39560137 NFYA JASPAR yes 22870953
chr15 39560119 39560137 NFYA JASPAR yes 70508500
SNP sites on vista19662[chr15:39559889-39560120]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 39559940 rs141993779 A G
HNF1B POU4F1 POU4F3
3904054
chr15 39559989 rs183981106 A G no 3904055
chr15 39560103 rs186853613 A T no 3904056
chr15 39560115 rs28557171 T A
TP53
3904057
Genes possibly regulated by vista19662[chr15:39559889-39560120]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 39542885 39547046 + C15orf54 ENSG00000175746.4 39542885 0.96 0.99 13794 82996
Expression level of Genes
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miRNAs possibly regulated by vista19662[chr15:39559889-39560120]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results