EnhancerDB
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  3. vista19663[chr15:39561378-39561942]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19663[chr15:39561378-39561942]
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Tissue distribution of vista19663
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Transcription factor that possibly regulate vista19663[chr15:39561378-39561942]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 39561390 39561405 TP53 JASPAR yes 22871166
chr15 39561390 39561405 TP53 JASPAR yes 70508501
chr15 39561396 39561416 TP53 JASPAR yes 22871167
chr15 39561396 39561416 TP53 JASPAR yes 70508502
chr15 39561402 39561422 TP53 JASPAR yes 22871168
chr15 39561402 39561422 TP53 JASPAR yes 70508503
chr15 39561446 39561460 STAT1 JASPAR yes 22871169
chr15 39561446 39561460 STAT1 JASPAR yes 70508504
chr15 39561446 39561461 STAT2 JASPAR yes 22871170
chr15 39561446 39561461 STAT2 JASPAR yes 70508505
chr15 39561483 39561487 YY1 TRANSFAC yes 22871171
chr15 39561483 39561487 YY1 TRANSFAC yes 70508506
chr15 39561512 39561523 HOXC12 JASPAR yes 22871172
chr15 39561512 39561523 HOXC13 JASPAR yes 22871173
chr15 39561512 39561523 HOXC12 JASPAR yes 70508507
chr15 39561512 39561523 HOXC13 JASPAR yes 70508508
chr15 39561518 39561533 RUNX2 JASPAR yes 22871174
chr15 39561518 39561533 RUNX2 JASPAR yes 70508509
chr15 39561574 39561582 TBX15 JASPAR yes 22871175
chr15 39561574 39561582 TBX15 JASPAR yes 70508510
chr15 39561574 39561583 ZEB1 JASPAR yes 22871176
chr15 39561574 39561583 ZEB1 JASPAR yes 70508511
chr15 39561575 39561585 TCF4 JASPAR yes 22871177
chr15 39561575 39561585 TCF4 JASPAR yes 70508512
chr15 39561577 39561582 USF2 TRANSFAC yes 22871178
chr15 39561577 39561582 USF2 TRANSFAC yes 70508513
chr15 39561581 39561586 TFAP2A TRANSFAC yes 22871179
chr15 39561581 39561586 TFAP2A TRANSFAC yes 70508514
chr15 39561581 39561587 MZF1 JASPAR yes 22871180
chr15 39561581 39561587 MZF1 JASPAR yes 70508515
chr15 39561605 39561626 IRF1 JASPAR yes 22871181
chr15 39561605 39561626 IRF1 JASPAR yes 70508516
chr15 39561609 39561624 PRDM1 JASPAR yes 22871182
chr15 39561609 39561624 PRDM1 JASPAR yes 70508517
chr15 39561611 39561632 IRF1 JASPAR yes 22871183
chr15 39561611 39561632 IRF1 JASPAR yes 70508518
chr15 39561616 39561631 JUND JASPAR yes 22871184
chr15 39561616 39561631 JUND JASPAR yes 70508519
chr15 39561625 39561636 NRL JASPAR yes 22871185
chr15 39561625 39561636 NRL JASPAR yes 70508520
chr15 39561631 39561644 POU2F2 JASPAR yes 22871186
chr15 39561631 39561644 POU2F2 JASPAR yes 70508521
chr15 39561634 39561640 TCF4 TRANSFAC yes 22871187
chr15 39561634 39561640 TCF4 TRANSFAC yes 70508522
chr15 39561641 39561646 H4TF1 TRANSFAC yes 22871188
chr15 39561641 39561646 H4TF1 TRANSFAC yes 70508523
chr15 39561661 39561670 SNAI2 JASPAR yes 22871189
chr15 39561661 39561670 SNAI2 JASPAR yes 70508524
chr15 39561661 39561671 TCF3 JASPAR yes 22871190
chr15 39561661 39561671 TCF3 JASPAR yes 70508525
chr15 39561666 39561672 ZNF354C JASPAR yes 22871191
chr15 39561666 39561672 ZNF354C JASPAR yes 70508526
chr15 39561673 39561679 NFIC JASPAR yes 22871192
chr15 39561673 39561679 NFIC JASPAR yes 70508527
chr15 39561678 39561692 GATA2 JASPAR yes 22871193
chr15 39561678 39561692 GATA2 JASPAR yes 70508528
chr15 39561684 39561688 NFE TRANSFAC yes 22871194
chr15 39561684 39561688 NFE TRANSFAC yes 70508529
chr15 39561693 39561703 NFATC3 JASPAR yes 22871195
chr15 39561693 39561703 NFATC3 JASPAR yes 70508530
chr15 39561694 39561701 NFATC2 JASPAR yes 22871196
chr15 39561694 39561701 NFATC2 JASPAR yes 70508531
chr15 39561695 39561711 SRF JASPAR yes 22871197
chr15 39561695 39561711 SRF JASPAR yes 70508532
chr15 39561695 39561713 SRF JASPAR yes 22871198
chr15 39561695 39561713 SRF JASPAR yes 70508533
chr15 39561703 39561713 NFATC3 JASPAR yes 22871199
chr15 39561703 39561713 NFATC3 JASPAR yes 70508534
chr15 39561705 39561712 NFATC2 JASPAR yes 22871200
chr15 39561705 39561712 NFATC2 JASPAR yes 70508535
chr15 39561706 39561714 FOXO3 JASPAR yes 22871201
chr15 39561706 39561714 FOXO3 JASPAR yes 70508536
chr15 39561708 39561720 TAL1 JASPAR yes 22871202
chr15 39561708 39561720 TAL1 JASPAR yes 70508537
chr15 39561709 39561721 NHLH1 JASPAR yes 22871203
chr15 39561709 39561721 NHLH1 JASPAR yes 70508538
chr15 39561710 39561720 MSC JASPAR yes 22871204
chr15 39561710 39561720 MYF6 JASPAR yes 22871205
chr15 39561710 39561720 NHLH1 JASPAR yes 22871206
chr15 39561710 39561720 TFAP4 JASPAR yes 22871207
chr15 39561710 39561720 MSC JASPAR yes 70508539
chr15 39561710 39561720 MYF6 JASPAR yes 70508540
chr15 39561710 39561720 NHLH1 JASPAR yes 70508541
chr15 39561710 39561720 TFAP4 JASPAR yes 70508542
chr15 39561719 39561727 MGA JASPAR yes 22871208
chr15 39561719 39561727 MGA JASPAR yes 70508543
chr15 39561719 39561732 SMAD2 JASPAR yes 22871209
chr15 39561719 39561732 SMAD2 JASPAR yes 70508544
chr15 39561728 39561732 H1TF2 TRANSFAC yes 22871210
chr15 39561728 39561732 NFE TRANSFAC yes 22871211
chr15 39561728 39561732 SRF TRANSFAC yes 22871212
chr15 39561728 39561732 H1TF2 TRANSFAC yes 70508545
chr15 39561728 39561732 NFE TRANSFAC yes 70508546
chr15 39561728 39561732 SRF TRANSFAC yes 70508547
chr15 39561757 39561761 NFE TRANSFAC yes 22871213
chr15 39561757 39561761 NFE TRANSFAC yes 70508548
chr15 39561758 39561768 SMAD3 JASPAR yes 22871214
chr15 39561758 39561768 SMAD3 JASPAR yes 70508549
chr15 39561760 39561775 TFAP2A JASPAR yes 22871215
chr15 39561760 39561775 TFAP2C JASPAR yes 22871216
chr15 39561760 39561775 TFAP2A JASPAR yes 70508550
chr15 39561760 39561775 TFAP2C JASPAR yes 70508551
chr15 39561762 39561777 TFAP2A JASPAR yes 22871217
chr15 39561762 39561777 TFAP2C JASPAR yes 22871218
chr15 39561762 39561777 TFAP2A JASPAR yes 70508552
chr15 39561762 39561777 TFAP2C JASPAR yes 70508553
chr15 39561763 39561774 TFAP2A JASPAR yes 22871219
chr15 39561763 39561774 TFAP2B JASPAR yes 22871220
chr15 39561763 39561774 TFAP2C JASPAR yes 22871221
chr15 39561763 39561774 TFAP2A JASPAR yes 70508554
chr15 39561763 39561774 TFAP2B JASPAR yes 70508555
chr15 39561763 39561774 TFAP2C JASPAR yes 70508556
chr15 39561764 39561777 ATF4 JASPAR yes 22871222
chr15 39561764 39561777 ATF4 JASPAR yes 70508557
chr15 39561821 39561827 SOX10 JASPAR yes 22871223
chr15 39561821 39561827 SOX10 JASPAR yes 70508558
chr15 39561832 39561847 SCRT1 JASPAR yes 22871224
chr15 39561832 39561847 SCRT1 JASPAR yes 70508559
chr15 39561843 39561847 H4TF2 TRANSFAC yes 22871225
chr15 39561843 39561847 H4TF2 TRANSFAC yes 70508560
chr15 39561851 39561856 H4TF1 TRANSFAC yes 22871226
chr15 39561851 39561856 H4TF1 TRANSFAC yes 70508561
chr15 39561864 39561882 SRF JASPAR yes 22871227
chr15 39561864 39561882 SRF JASPAR yes 70508562
chr15 39561877 39561882 GATA2 JASPAR yes 22871228
chr15 39561877 39561882 GATA2 JASPAR yes 70508563
SNP sites on vista19663[chr15:39561378-39561942]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 39561381 rs12440113 T C no 3904086
chr15 39561385 rs142654974 A C no 3904087
chr15 39561565 rs183579077 G T no 3904088
chr15 39561654 rs146893370 G A no 3904089
chr15 39561705 rs147772437 A G
NFATC2 NFATC3 SRF
3904090
chr15 39561721 rs77660997 G A
MGA NHLH1 SMAD2
3904091
chr15 39561816 rs156800 T C,G no 3904092
chr15 39561882 rs148823443 A G
GATA2 SRF
3904093
Genes possibly regulated by vista19663[chr15:39561378-39561942]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 39542885 39547046 + C15orf54 ENSG00000175746.4 39542885 0.96 0.99 13794 81507
Expression level of Genes
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miRNAs possibly regulated by vista19663[chr15:39561378-39561942]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results