EnhancerDB
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  3. vista19670[chr15:39629434-39629748]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19670[chr15:39629434-39629748]
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Tissue distribution of vista19670
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Transcription factor that possibly regulate vista19670[chr15:39629434-39629748]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 39629446 39629459 ELF1 JASPAR yes 22878092
chr15 39629446 39629459 ELF1 JASPAR yes 70508891
chr15 39629470 39629483 NFKB1 JASPAR yes 22878093
chr15 39629470 39629483 NFKB1 JASPAR yes 70508892
chr15 39629472 39629483 FOXH1 JASPAR yes 22878094
chr15 39629472 39629483 FOXH1 JASPAR yes 70508893
chr15 39629476 39629482 ZNF354C JASPAR yes 22878095
chr15 39629476 39629482 ZNF354C JASPAR yes 70508894
chr15 39629501 39629506 TFAP2A TRANSFAC yes 22878096
chr15 39629501 39629506 TFAP2A TRANSFAC yes 70508895
chr15 39629501 39629507 MZF1 JASPAR yes 22878097
chr15 39629501 39629507 MZF1 JASPAR yes 70508896
chr15 39629503 39629512 NF-kappaB TRANSFAC yes 22878098
chr15 39629503 39629512 NF-kappaB TRANSFAC yes 70508897
chr15 39629503 39629513 NFKB1 JASPAR yes 22878099
chr15 39629503 39629513 RELA JASPAR yes 22878100
chr15 39629503 39629513 REL JASPAR yes 22878101
chr15 39629503 39629513 NFKB1 JASPAR yes 70508898
chr15 39629503 39629513 RELA JASPAR yes 70508899
chr15 39629503 39629513 REL JASPAR yes 70508900
chr15 39629503 39629514 NFKB1 JASPAR yes 22878102
chr15 39629503 39629514 NFKB1 JASPAR yes 70508901
chr15 39629506 39629516 NFATC3 JASPAR yes 22878103
chr15 39629506 39629516 NFATC3 JASPAR yes 70508902
chr15 39629524 39629535 NFKB1 JASPAR yes 22878104
chr15 39629524 39629535 NFKB1 JASPAR yes 70508903
chr15 39629529 39629544 MAFK JASPAR yes 22878105
chr15 39629529 39629544 MAFK JASPAR yes 70508904
chr15 39629533 39629544 NRL JASPAR yes 22878106
chr15 39629533 39629544 NRL JASPAR yes 70508905
chr15 39629545 39629555 SMAD3 JASPAR yes 22878107
chr15 39629545 39629555 SMAD3 JASPAR yes 70508906
chr15 39629556 39629566 SMAD3 JASPAR yes 22878108
chr15 39629556 39629566 SMAD3 JASPAR yes 70508907
chr15 39629566 39629579 SMAD2 JASPAR yes 22878109
chr15 39629566 39629579 SMAD2 JASPAR yes 70508908
chr15 39629598 39629619 ZNF263 JASPAR yes 22878110
chr15 39629598 39629619 ZNF263 JASPAR yes 70508909
chr15 39629600 39629607 NFATC2 JASPAR yes 22878111
chr15 39629600 39629607 NFATC2 JASPAR yes 70508910
chr15 39629610 39629621 E2F6 JASPAR yes 22878112
chr15 39629610 39629621 E2F6 JASPAR yes 70508911
chr15 39629611 39629632 ZNF263 JASPAR yes 22878113
chr15 39629611 39629632 ZNF263 JASPAR yes 70508912
chr15 39629613 39629634 ZNF263 JASPAR yes 22878114
chr15 39629613 39629634 ZNF263 JASPAR yes 70508913
chr15 39629623 39629631 FOXC1 JASPAR yes 22878115
chr15 39629623 39629631 FOXC1 JASPAR yes 70508914
chr15 39629648 39629654 TCF4 TRANSFAC yes 22878116
chr15 39629648 39629654 TCF4 TRANSFAC yes 70508915
chr15 39629648 39629659 NFE2L2 JASPAR yes 22878117
chr15 39629648 39629659 NFE2L2 JASPAR yes 70508916
chr15 39629673 39629686 NFKB1 JASPAR yes 22878118
chr15 39629673 39629686 NFKB2 JASPAR yes 22878119
chr15 39629673 39629686 NFKB1 JASPAR yes 70508917
chr15 39629673 39629686 NFKB2 JASPAR yes 70508918
chr15 39629674 39629685 NFKB1 JASPAR yes 22878120
chr15 39629674 39629685 NFKB1 JASPAR yes 70508919
chr15 39629674 39629687 NFKB1 JASPAR yes 22878121
chr15 39629674 39629687 NFKB1 JASPAR yes 70508920
chr15 39629675 39629685 NFKB1 JASPAR yes 22878122
chr15 39629675 39629685 RELA JASPAR yes 22878123
chr15 39629675 39629685 NFKB1 JASPAR yes 70508921
chr15 39629675 39629685 RELA JASPAR yes 70508922
chr15 39629675 39629686 NFKB1 JASPAR yes 22878124
chr15 39629675 39629686 NFKB1 JASPAR yes 70508923
chr15 39629676 39629686 RELA JASPAR yes 22878125
chr15 39629676 39629686 REL JASPAR yes 22878126
chr15 39629676 39629686 RELA JASPAR yes 70508924
chr15 39629676 39629686 REL JASPAR yes 70508925
chr15 39629698 39629709 FOXA1 JASPAR yes 70508926
chr15 39629701 39629706 ETS2 TRANSFAC yes 70508927
chr15 39629701 39629715 TCF7L2 JASPAR yes 70508928
chr15 39629714 39629718 NFE TRANSFAC yes 70508929
SNP sites on vista19670[chr15:39629434-39629748]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 39629474 rs193133379 G A
FOXH1 NFKB1
3905112
chr15 39629503 rs73387485 G A
MZF1 NF-kappaB NFKB1 REL RELA TFAP2A
3905113
chr15 39629571 rs149753925 C T
SMAD2
3905114
chr15 39629670 rs145607672 C T no 3905115
chr15 39629714 rs189356226 G A
NFE TCF7L2
3905116
Genes possibly regulated by vista19670[chr15:39629434-39629748]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 39542885 39547046 + C15orf54 ENSG00000175746.4 39542885 0.96 0.99 13794 13451
Expression level of Genes
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miRNAs possibly regulated by vista19670[chr15:39629434-39629748]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results