EnhancerDB
  1. Home
  2. Enhancers
  3. vista197[chr1:7538871-7539273]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista197[chr1:7538871-7539273]
Back to top
Tissue distribution of vista197
Back to top
Transcription factor that possibly regulate vista197[chr1:7538871-7539273]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 7538877 7538883 TCF4 TRANSFAC yes 26467719
chr1 7538877 7538883 TCF4 TRANSFAC yes 118222541
chr1 7538878 7538887 SRY JASPAR yes 26467720
chr1 7538878 7538887 SRY JASPAR yes 118222542
chr1 7538881 7538892 HOXA10 JASPAR yes 26467721
chr1 7538881 7538892 HOXA10 JASPAR yes 118222543
chr1 7538882 7538892 ALX3 JASPAR yes 26467722
chr1 7538882 7538892 GSX2 JASPAR yes 26467723
chr1 7538882 7538892 HOXB2 JASPAR yes 26467724
chr1 7538882 7538892 MNX1 JASPAR yes 26467725
chr1 7538882 7538892 ALX3 JASPAR yes 118222544
chr1 7538882 7538892 GSX2 JASPAR yes 118222545
chr1 7538882 7538892 HOXB2 JASPAR yes 118222546
chr1 7538882 7538892 MNX1 JASPAR yes 118222547
chr1 7538883 7538891 LMX1A JASPAR yes 26467726
chr1 7538883 7538891 LMX1B JASPAR yes 26467727
chr1 7538883 7538891 NKX6-1 JASPAR yes 26467728
chr1 7538883 7538891 NKX6-2 JASPAR yes 26467729
chr1 7538883 7538891 VAX1 JASPAR yes 26467730
chr1 7538883 7538891 VAX2 JASPAR yes 26467731
chr1 7538883 7538891 VSX1 JASPAR yes 26467732
chr1 7538883 7538891 VSX2 JASPAR yes 26467733
chr1 7538883 7538891 LMX1A JASPAR yes 118222548
chr1 7538883 7538891 LMX1B JASPAR yes 118222549
chr1 7538883 7538891 NKX6-1 JASPAR yes 118222550
chr1 7538883 7538891 NKX6-2 JASPAR yes 118222551
chr1 7538883 7538891 VAX1 JASPAR yes 118222552
chr1 7538883 7538891 VAX2 JASPAR yes 118222553
chr1 7538883 7538891 VSX1 JASPAR yes 118222554
chr1 7538883 7538891 VSX2 JASPAR yes 118222555
chr1 7538888 7538893 GATA2 JASPAR yes 26467734
chr1 7538888 7538893 GATA2 JASPAR yes 118222556
chr1 7538906 7538916 TFAP4 JASPAR yes 26467735
chr1 7538906 7538916 TFAP4 JASPAR yes 118222557
chr1 7538912 7538927 AR JASPAR yes 26467736
chr1 7538912 7538927 AR JASPAR yes 118222558
chr1 7538927 7538939 POU2F1 JASPAR yes 26467737
chr1 7538927 7538939 POU2F1 JASPAR yes 118222559
chr1 7538927 7538940 POU3F3 JASPAR yes 26467738
chr1 7538927 7538940 POU3F3 JASPAR yes 118222560
chr1 7538927 7538941 POU1F1 JASPAR yes 26467739
chr1 7538927 7538941 POU1F1 JASPAR yes 118222561
chr1 7538928 7538940 POU3F1 JASPAR yes 26467740
chr1 7538928 7538940 POU3F2 JASPAR yes 26467741
chr1 7538928 7538940 POU3F1 JASPAR yes 118222562
chr1 7538928 7538940 POU3F2 JASPAR yes 118222563
chr1 7538929 7538938 POU3F4 JASPAR yes 26467742
chr1 7538929 7538938 POU5F1B JASPAR yes 26467743
chr1 7538929 7538938 POU3F4 JASPAR yes 118222564
chr1 7538929 7538938 POU5F1B JASPAR yes 118222565
chr1 7538960 7538979 RFX2 JASPAR yes 26467744
chr1 7538960 7538979 RFX2 JASPAR yes 118222566
chr1 7538964 7538980 RFX5 JASPAR yes 26467745
chr1 7538964 7538980 RFX5 JASPAR yes 118222567
chr1 7538968 7538982 IRF7 JASPAR yes 26467746
chr1 7538968 7538982 IRF7 JASPAR yes 118222568
chr1 7538970 7538982 IRF1 JASPAR yes 26467747
chr1 7538970 7538982 IRF1 JASPAR yes 118222569
chr1 7538987 7539002 TFAP2A JASPAR yes 26467748
chr1 7538987 7539002 TFAP2A JASPAR yes 118222570
chr1 7538996 7539001 ETS2 TRANSFAC yes 26467749
chr1 7538996 7539001 ETS2 TRANSFAC yes 118222571
chr1 7538999 7539017 IRF2 JASPAR yes 26467750
chr1 7538999 7539017 IRF2 JASPAR yes 118222572
chr1 7539000 7539021 IRF1 JASPAR yes 26467751
chr1 7539000 7539021 IRF1 JASPAR yes 118222573
chr1 7539002 7539017 PRDM1 JASPAR yes 26467752
chr1 7539002 7539017 STAT2 JASPAR yes 26467753
chr1 7539002 7539017 PRDM1 JASPAR yes 118222574
chr1 7539002 7539017 STAT2 JASPAR yes 118222575
chr1 7539003 7539017 SPIC JASPAR yes 26467754
chr1 7539003 7539017 STAT1 JASPAR yes 26467755
chr1 7539003 7539017 SPIC JASPAR yes 118222576
chr1 7539003 7539017 STAT1 JASPAR yes 118222577
chr1 7539004 7539018 IRF7 JASPAR yes 26467756
chr1 7539004 7539018 IRF8 JASPAR yes 26467757
chr1 7539004 7539018 IRF7 JASPAR yes 118222578
chr1 7539004 7539018 IRF8 JASPAR yes 118222579
chr1 7539004 7539019 IRF9 JASPAR yes 26467758
chr1 7539004 7539019 IRF9 JASPAR yes 118222580
chr1 7539020 7539030 SREBF1 JASPAR yes 26467759
chr1 7539020 7539030 SREBF2 JASPAR yes 26467760
chr1 7539020 7539030 SREBF1 JASPAR yes 118222581
chr1 7539020 7539030 SREBF2 JASPAR yes 118222582
chr1 7539021 7539026 ATF1 TRANSFAC yes 26467761
chr1 7539021 7539026 ATF1 TRANSFAC yes 118222583
chr1 7539025 7539040 HNF4G JASPAR yes 26467762
chr1 7539025 7539040 HNF4G JASPAR yes 118222584
chr1 7539026 7539040 RXRB JASPAR yes 26467763
chr1 7539026 7539040 RXRG JASPAR yes 26467764
chr1 7539026 7539040 RXRB JASPAR yes 118222585
chr1 7539026 7539040 RXRG JASPAR yes 118222586
chr1 7539026 7539041 HNF4A JASPAR yes 26467765
chr1 7539026 7539041 HNF4A JASPAR yes 118222587
chr1 7539029 7539035 TCF1 TRANSFAC yes 26467766
chr1 7539029 7539035 TCF1 TRANSFAC yes 118222588
chr1 7539035 7539039 LFA1 TRANSFAC yes 26467767
chr1 7539035 7539039 LFA1 TRANSFAC yes 118222589
chr1 7539079 7539095 GLIS1 JASPAR yes 26467768
chr1 7539079 7539095 GLIS1 JASPAR yes 118222590
chr1 7539085 7539102 RXRA JASPAR yes 26467769
chr1 7539085 7539102 RXRA JASPAR yes 118222591
chr1 7539086 7539091 SP1 TRANSFAC yes 26467770
chr1 7539086 7539091 SP1 TRANSFAC yes 118222592
chr1 7539090 7539095 SP1 TRANSFAC yes 26467771
chr1 7539090 7539095 SP1 TRANSFAC yes 118222593
chr1 7539114 7539126 CREB1 JASPAR yes 26467772
chr1 7539114 7539126 CREB1 JASPAR yes 118222594
chr1 7539115 7539120 ATF1 TRANSFAC yes 26467773
chr1 7539115 7539120 ATF1 TRANSFAC yes 118222595
chr1 7539117 7539128 NRL JASPAR yes 26467774
chr1 7539117 7539128 NRL JASPAR yes 118222596
chr1 7539145 7539157 NHLH1 JASPAR yes 26467775
chr1 7539145 7539157 NHLH1 JASPAR yes 118222597
chr1 7539146 7539156 TFAP4 JASPAR yes 26467776
chr1 7539146 7539156 TFAP4 JASPAR yes 118222598
chr1 7539146 7539158 TAL1 JASPAR yes 26467777
chr1 7539146 7539158 TAL1 JASPAR yes 118222599
chr1 7539165 7539177 GLI2 JASPAR yes 26467778
chr1 7539165 7539177 GLI2 JASPAR yes 118222600
chr1 7539193 7539206 ELF1 JASPAR yes 26467779
chr1 7539193 7539206 ELF1 JASPAR yes 118222601
chr1 7539194 7539206 EHF JASPAR yes 26467780
chr1 7539194 7539206 ELF1 JASPAR yes 26467781
chr1 7539194 7539206 EHF JASPAR yes 118222602
chr1 7539194 7539206 ELF1 JASPAR yes 118222603
chr1 7539194 7539207 ELF3 JASPAR yes 26467782
chr1 7539194 7539207 ELF3 JASPAR yes 118222604
chr1 7539195 7539206 ELF5 JASPAR yes 26467783
chr1 7539195 7539206 ELF5 JASPAR yes 118222605
chr1 7539197 7539202 ETS2 TRANSFAC yes 26467784
chr1 7539197 7539202 ETS2 TRANSFAC yes 118222606
chr1 7539197 7539205 FEV JASPAR yes 26467785
chr1 7539197 7539205 FEV JASPAR yes 118222607
chr1 7539198 7539205 SPI1 JASPAR yes 26467786
chr1 7539198 7539205 SPI1 JASPAR yes 118222608
chr1 7539198 7539208 NFKB1 JASPAR yes 26467787
chr1 7539198 7539208 NFKB1 JASPAR yes 118222609
chr1 7539212 7539227 JUND JASPAR yes 26467788
chr1 7539212 7539227 JUND JASPAR yes 118222610
chr1 7539236 7539252 POU4F3 JASPAR yes 26467789
chr1 7539236 7539252 POU4F3 JASPAR yes 118222611
chr1 7539238 7539242 YY1 TRANSFAC yes 26467790
chr1 7539238 7539242 YY1 TRANSFAC yes 118222612
chr1 7539238 7539252 POU4F1 JASPAR yes 26467791
chr1 7539238 7539252 POU4F1 JASPAR yes 118222613
chr1 7539244 7539248 YY1 TRANSFAC yes 26467792
chr1 7539244 7539248 YY1 TRANSFAC yes 118222614
SNP sites on vista197[chr1:7538871-7539273]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 7538918 rs138989257 T C
AR
46344
chr1 7539079 rs530235125 G A
GLIS1
46345
chr1 7539174 rs75651384 G A
GLI2
46346
chr1 7539176 rs550080793 G A
GLI2
46347
chr1 7539181 rs570886006 A G no 46348
chr1 7539194 rs79942344 C A
EHF ELF1 ELF3
46349
Genes possibly regulated by vista197[chr1:7538871-7539273]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
Back to top
No results
miRNAs possibly regulated by vista197[chr1:7538871-7539273]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results