EnhancerDB
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  3. vista19701[chr15:39960796-39961183]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19701[chr15:39960796-39961183]
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Tissue distribution of vista19701
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Transcription factor that possibly regulate vista19701[chr15:39960796-39961183]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 39960638 39961137 GATA3 UCSC Txn Factor no Conserved 108133175
chr15 39960687 39961025 ESR1 UCSC Txn Factor no Conserved 108133176
chr15 39960790 39960804 POU1F1 JASPAR yes 22907012
chr15 39960790 39960804 POU1F1 JASPAR yes 70510653
chr15 39960791 39960801 MEF2A JASPAR yes 22907013
chr15 39960791 39960801 MEF2A JASPAR yes 70510654
chr15 39960792 39960796 YY1 TRANSFAC yes 22907014
chr15 39960792 39960796 YY1 TRANSFAC yes 70510655
chr15 39960792 39960801 POU5F1B JASPAR yes 22907015
chr15 39960792 39960801 POU5F1B JASPAR yes 70510656
chr15 39960803 39960812 NFIX JASPAR yes 22907016
chr15 39960803 39960812 NFIX JASPAR yes 70510657
chr15 39960803 39960813 NFIA JASPAR yes 22907017
chr15 39960803 39960813 NFIA JASPAR yes 70510658
chr15 39960804 39960813 HIC2 JASPAR yes 22907018
chr15 39960804 39960813 HIC2 JASPAR yes 70510659
chr15 39960805 39960811 NFIC JASPAR yes 22907019
chr15 39960805 39960811 NFIC JASPAR yes 70510660
chr15 39960816 39960821 ETS2 TRANSFAC yes 22907020
chr15 39960816 39960821 ETS2 TRANSFAC yes 70510661
chr15 39960819 39960829 HOXA13 JASPAR yes 22907021
chr15 39960819 39960829 HOXB13 JASPAR yes 22907022
chr15 39960819 39960829 HOXD13 JASPAR yes 22907023
chr15 39960819 39960829 HOXA13 JASPAR yes 70510662
chr15 39960819 39960829 HOXB13 JASPAR yes 70510663
chr15 39960819 39960829 HOXD13 JASPAR yes 70510664
chr15 39960819 39960830 HOXA10 JASPAR yes 22907024
chr15 39960819 39960830 HOXA10 JASPAR yes 70510665
chr15 39960820 39960829 CDX1 JASPAR yes 22907025
chr15 39960820 39960829 CDX1 JASPAR yes 70510666
chr15 39960820 39960831 CDX2 JASPAR yes 22907026
chr15 39960820 39960831 CDX2 JASPAR yes 70510667
chr15 39960840 39960860 ESR1 JASPAR yes 22907027
chr15 39960840 39960860 ESR1 JASPAR yes 70510668
chr15 39960844 39960861 ESR1 JASPAR yes 22907028
chr15 39960844 39960861 ESR1 JASPAR yes 70510669
chr15 39960844 39960862 ESR1 JASPAR yes 22907029
chr15 39960844 39960862 ESR2 JASPAR yes 22907030
chr15 39960844 39960862 ESR1 JASPAR yes 70510670
chr15 39960844 39960862 ESR2 JASPAR yes 70510671
chr15 39960845 39960860 ESR2 JASPAR yes 22907031
chr15 39960845 39960860 ESR2 JASPAR yes 70510672
chr15 39960845 39960865 ESR1 JASPAR yes 22907032
chr15 39960845 39960865 ESR1 JASPAR yes 70510673
chr15 39960846 39960850 ESR1 TRANSFAC yes 22907033
chr15 39960846 39960850 ESR1 TRANSFAC yes 70510674
chr15 39960860 39960872 PKNOX2 JASPAR yes 22907034
chr15 39960860 39960872 PKNOX2 JASPAR yes 70510675
chr15 39960872 39960876 ESR1 TRANSFAC yes 22907035
chr15 39960872 39960876 ESR1 TRANSFAC yes 70510676
chr15 39960884 39960902 NR3C1 JASPAR yes 22907036
chr15 39960884 39960902 NR3C1 JASPAR yes 70510677
chr15 39960909 39960913 ESR1 TRANSFAC yes 22907037
chr15 39960909 39960913 ESR1 TRANSFAC yes 70510678
chr15 39960912 39960917 MYC TRANSFAC yes 22907038
chr15 39960912 39960917 MYC TRANSFAC yes 70510679
chr15 39960935 39960940 ETS2 TRANSFAC yes 22907039
chr15 39960935 39960940 ETS2 TRANSFAC yes 70510680
chr15 39960947 39960958 RUNX1 JASPAR yes 22907040
chr15 39960947 39960958 RUNX1 JASPAR yes 70510681
chr15 39960976 39960981 ETS2 TRANSFAC yes 22907041
chr15 39960976 39960981 ETS2 TRANSFAC yes 70510682
chr15 39961019 39961023 YY1 TRANSFAC yes 22907042
chr15 39961019 39961023 YY1 TRANSFAC yes 70510683
chr15 39961019 39961034 MEF2C JASPAR yes 22907043
chr15 39961019 39961034 MEF2C JASPAR yes 70510684
chr15 39961020 39961035 MEF2A JASPAR yes 22907044
chr15 39961020 39961035 MEF2A JASPAR yes 70510685
chr15 39961021 39961033 MEF2A JASPAR yes 22907045
chr15 39961021 39961033 MEF2D JASPAR yes 22907046
chr15 39961021 39961033 MEF2A JASPAR yes 70510686
chr15 39961021 39961033 MEF2D JASPAR yes 70510687
chr15 39961022 39961032 MEF2A JASPAR yes 22907047
chr15 39961022 39961032 MEF2A JASPAR yes 70510688
chr15 39961024 39961040 POU4F2 JASPAR yes 22907048
chr15 39961024 39961040 POU4F3 JASPAR yes 22907049
chr15 39961024 39961040 POU4F2 JASPAR yes 70510689
chr15 39961024 39961040 POU4F3 JASPAR yes 70510690
chr15 39961026 39961037 CDX2 JASPAR yes 22907050
chr15 39961026 39961037 CDX2 JASPAR yes 70510691
chr15 39961026 39961040 ONECUT3 JASPAR yes 22907051
chr15 39961026 39961040 ONECUT3 JASPAR yes 70510692
chr15 39961116 39961119 MYB TRANSFAC yes 22907052
chr15 39961116 39961119 MYB TRANSFAC yes 70510693
chr15 39961141 39961162 IRF1 JASPAR yes 22907053
chr15 39961141 39961162 IRF1 JASPAR yes 70510694
chr15 39961150 39961154 YY1 TRANSFAC yes 22907054
chr15 39961150 39961154 YY1 TRANSFAC yes 70510695
chr15 39961162 39961166 ESR1 TRANSFAC yes 22907055
chr15 39961162 39961166 ESR1 TRANSFAC yes 70510696
chr15 39961173 39961188 JUND JASPAR yes 22907056
chr15 39961173 39961188 JUND JASPAR yes 70510697
chr15 39961181 39961185 TEAD2 TRANSFAC yes 22907057
chr15 39961181 39961185 TEAD2 TRANSFAC yes 70510698
chr15 39961183 39961190 NKX3-1 JASPAR yes 22907058
chr15 39961183 39961190 NKX3-1 JASPAR yes 70510699
SNP sites on vista19701[chr15:39960796-39961183]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 39960943 rs8029851 C T
ESR1 GATA3
3908217
chr15 39960956 rs77974773 C G
ESR1 GATA3 RUNX1
3908218
chr15 39960973 rs80020790 A C
ESR1 GATA3
3908219
chr15 39960984 rs73393295 G A,C
ESR1 GATA3
3908220
chr15 39961031 rs73393297 A C
CDX2 GATA3 MEF2A MEF2C MEF2D ONECUT3 POU4F2 POU4F3
3908221
Genes possibly regulated by vista19701[chr15:39960796-39961183]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 39873280 39891667 + THBS1 ENSG00000137801.9 39873280 0.94 0.97 13795 12484
Expression level of Genes
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miRNAs possibly regulated by vista19701[chr15:39960796-39961183]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results