EnhancerDB
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  3. vista19709[chr15:40180090-40180249]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19709[chr15:40180090-40180249]
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Tissue distribution of vista19709
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Transcription factor that possibly regulate vista19709[chr15:40180090-40180249]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 40179923 40180370 CTCF UCSC Txn Factor no Conserved 108133351
chr15 40180023 40180301 RAD21 UCSC Txn Factor no Conserved 108133354
chr15 40180090 40180094 TEAD2 TRANSFAC yes 22917752
chr15 40180090 40180094 TEAD2 TRANSFAC yes 70511071
chr15 40180090 40180095 TBP TRANSFAC yes 22917753
chr15 40180090 40180095 TBP TRANSFAC yes 70511072
chr15 40180090 40180096 TFIID TRANSFAC yes 22917754
chr15 40180090 40180096 TFIID TRANSFAC yes 70511073
chr15 40180107 40180113 YY1 JASPAR yes 22917755
chr15 40180107 40180113 YY1 JASPAR yes 70511074
chr15 40180113 40180121 GATA1 TRANSFAC yes 22917756
chr15 40180113 40180121 GATA1 TRANSFAC yes 70511075
chr15 40180116 40180120 NFE TRANSFAC yes 22917757
chr15 40180116 40180120 NFE TRANSFAC yes 70511076
chr15 40180116 40180121 GATA1 TRANSFAC yes 22917758
chr15 40180116 40180121 GATA1 TRANSFAC yes 70511077
chr15 40180116 40180122 GATA3 JASPAR yes 22917759
chr15 40180116 40180122 GATA3 JASPAR yes 70511078
chr15 40180121 40180127 TCF4 TRANSFAC yes 22917760
chr15 40180121 40180127 TCF4 TRANSFAC yes 70511079
chr15 40180133 40180141 EHF JASPAR yes 22917761
chr15 40180133 40180141 EHF JASPAR yes 70511080
chr15 40180141 40180147 SOX10 JASPAR yes 22917762
chr15 40180141 40180147 SOX10 JASPAR yes 70511081
chr15 40180151 40180172 REST JASPAR yes 22917763
chr15 40180151 40180172 REST JASPAR yes 70511082
chr15 40180152 40180171 REST JASPAR yes 22917764
chr15 40180152 40180171 REST JASPAR yes 70511083
chr15 40180156 40180175 CTCF JASPAR yes 22917765
chr15 40180156 40180175 CTCF JASPAR yes 70511084
chr15 40180167 40180171 LFA1 TRANSFAC yes 22917766
chr15 40180167 40180171 LFA1 TRANSFAC yes 70511085
chr15 40180173 40180185 TEAD1 JASPAR yes 22917767
chr15 40180173 40180185 TEAD1 JASPAR yes 70511086
chr15 40180174 40180181 SPIB JASPAR yes 22917768
chr15 40180174 40180181 SPIB JASPAR yes 70511087
chr15 40180191 40180209 RARA JASPAR yes 22917769
chr15 40180191 40180209 RARA JASPAR yes 70511088
chr15 40180203 40180206 MYB TRANSFAC yes 22917770
chr15 40180203 40180206 MYB TRANSFAC yes 70511089
chr15 40180211 40180219 GATA3 JASPAR yes 22917771
chr15 40180211 40180219 GATA3 JASPAR yes 70511090
chr15 40180222 40180233 NFKB1 JASPAR yes 22917772
chr15 40180222 40180233 NFKB1 JASPAR yes 70511091
chr15 40180223 40180233 NFKB1 JASPAR yes 22917773
chr15 40180223 40180233 NFKB1 JASPAR yes 70511092
chr15 40180236 40180240 YY1 TRANSFAC yes 22917774
chr15 40180236 40180240 YY1 TRANSFAC yes 70511093
chr15 40180237 40180247 HOXB13 JASPAR yes 22917775
chr15 40180237 40180247 HOXB13 JASPAR yes 70511094
chr15 40180241 40180245 YY1 TRANSFAC yes 22917776
chr15 40180241 40180245 YY1 TRANSFAC yes 70511095
SNP sites on vista19709[chr15:40180090-40180249]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 40180154 rs149335267 C T
CTCF RAD21 REST
3909400
chr15 40180214 rs144621439 T A
CTCF GATA3 RAD21
3909401
Genes possibly regulated by vista19709[chr15:40180090-40180249]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 40091233 40213093 - GPR176 ENSG00000166073.4 40213093 0.76 0.97 13797 67156
chr15 40226347 40327797 + EIF2AK4 ENSG00000128829.7 40226347 0.85 0.99 13798 53902
Expression level of Genes
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miRNAs possibly regulated by vista19709[chr15:40180090-40180249]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results