EnhancerDB
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  3. vista19727[chr15:40397040-40397227]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19727[chr15:40397040-40397227]
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Tissue distribution of vista19727
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Transcription factor that possibly regulate vista19727[chr15:40397040-40397227]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 40396907 40397570 E2F1 UCSC Txn Factor no Conserved 108134169
chr15 40396907 40397570 E2F1 UCSC Txn Factor no Conserved 108134170
chr15 40396938 40397363 TFAP2C UCSC Txn Factor no Conserved 108134177
chr15 40396938 40397363 TFAP2C UCSC Txn Factor no Conserved 108134178
chr15 40396948 40397580 CTCF UCSC Txn Factor no Conserved 108134184
chr15 40396948 40397580 CTCF UCSC Txn Factor no Conserved 108134185
chr15 40396952 40397388 MAX UCSC Txn Factor no Conserved 108134186
chr15 40396952 40397388 MAX UCSC Txn Factor no Conserved 108134187
chr15 40396965 40397475 E2F6 UCSC Txn Factor no Conserved 108134190
chr15 40396965 40397475 E2F6 UCSC Txn Factor no Conserved 108134191
chr15 40396984 40397598 TFAP2A UCSC Txn Factor no Conserved 108134207
chr15 40396984 40397598 TFAP2A UCSC Txn Factor no Conserved 108134208
chr15 40397018 40397333 ZNF143 UCSC Txn Factor no Conserved 108134231
chr15 40397018 40397333 ZNF143 UCSC Txn Factor no Conserved 108134232
chr15 40397020 40397303 RAD21 UCSC Txn Factor no Conserved 108134234
chr15 40397020 40397303 RAD21 UCSC Txn Factor no Conserved 108134235
chr15 40397046 40397057 E2F6 JASPAR yes 22930049
chr15 40397046 40397057 E2F6 JASPAR yes 70511874
chr15 40397050 40397065 STAT2 JASPAR yes 22930050
chr15 40397050 40397065 STAT2 JASPAR yes 70511875
chr15 40397052 40397073 IRF1 JASPAR yes 22930051
chr15 40397052 40397073 IRF1 JASPAR yes 70511876
chr15 40397075 40397085 NFIA JASPAR yes 22930052
chr15 40397075 40397085 NFIA JASPAR yes 70511877
chr15 40397077 40397083 NFIC JASPAR yes 22930053
chr15 40397077 40397083 NFIC JASPAR yes 70511878
chr15 40397093 40397113 TP53 JASPAR yes 22930054
chr15 40397093 40397113 TP53 JASPAR yes 70511879
chr15 40397096 40397111 TFAP2A JASPAR yes 22930055
chr15 40397096 40397111 TFAP2C JASPAR yes 22930056
chr15 40397096 40397111 TFAP2A JASPAR yes 70511880
chr15 40397096 40397111 TFAP2C JASPAR yes 70511881
chr15 40397098 40397110 INSM1 JASPAR yes 22930057
chr15 40397098 40397110 INSM1 JASPAR yes 70511882
chr15 40397099 40397110 TFAP2A JASPAR yes 22930058
chr15 40397099 40397110 TFAP2B JASPAR yes 22930059
chr15 40397099 40397110 TFAP2C JASPAR yes 22930060
chr15 40397099 40397110 TFAP2A JASPAR yes 70511883
chr15 40397099 40397110 TFAP2B JASPAR yes 70511884
chr15 40397099 40397110 TFAP2C JASPAR yes 70511885
chr15 40397100 40397109 TFAP2A JASPAR yes 22930061
chr15 40397100 40397109 TFAP2A JASPAR yes 70511886
chr15 40397150 40397171 REST JASPAR yes 22930062
chr15 40397150 40397171 REST JASPAR yes 70511887
chr15 40397169 40397176 E2F1 TRANSFAC yes 22930063
chr15 40397169 40397176 E2F1 TRANSFAC yes 70511888
chr15 40397190 40397211 ZNF263 JASPAR yes 22930064
chr15 40397190 40397211 ZNF263 JASPAR yes 70511889
chr15 40397192 40397207 PRDM1 JASPAR yes 22930065
chr15 40397192 40397207 PRDM1 JASPAR yes 70511890
chr15 40397195 40397206 E2F6 JASPAR yes 22930066
chr15 40397195 40397206 E2F6 JASPAR yes 70511891
chr15 40397198 40397219 ZNF263 JASPAR yes 22930067
chr15 40397198 40397219 ZNF263 JASPAR yes 70511892
chr15 40397203 40397224 ZNF263 JASPAR yes 22930068
chr15 40397203 40397224 ZNF263 JASPAR yes 70511893
chr15 40397206 40397212 SP1 TRANSFAC yes 22930069
chr15 40397206 40397212 SP1 TRANSFAC yes 70511894
chr15 40397208 40397219 NRF1 JASPAR yes 22930070
chr15 40397208 40397219 NRF1 JASPAR yes 70511895
chr15 40397212 40397221 THAP1 JASPAR yes 22930071
chr15 40397212 40397221 THAP1 JASPAR yes 70511896
chr15 40397222 40397227 GATA2 JASPAR yes 22930072
chr15 40397222 40397227 GATA2 JASPAR yes 70511897
SNP sites on vista19727[chr15:40397040-40397227]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 40397050 rs183760075 A C
CTCF E2F1 E2F6 MAX RAD21 STAT2 TFAP2A TFAP2C ZNF143
3910748
chr15 40397081 rs201092778 CA C
CTCF E2F1 E2F6 MAX NFIA NFIC RAD21 TFAP2A TFAP2C ZNF143
3910749
chr15 40397094 rs12148376 G A
CTCF E2F1 E2F6 MAX RAD21 TFAP2A TFAP2C TP53 ZNF143
3910750
chr15 40397191 rs34245505 C G
CTCF E2F1 E2F6 MAX RAD21 TFAP2A TFAP2C ZNF143 ZNF263
3910751
Genes possibly regulated by vista19727[chr15:40397040-40397227]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 40327940 40331389 - SRP14 ENSG00000140319.6 40331389 0.68 0.99 13799 34349
chr15 40380091 40401093 - BMF ENSG00000104081.9 40401093 0.87 0.99 13800 96134
chr15 40453224 40513337 + BUB1B ENSG00000156970.8 40453224 0.92 0.99 13801 44003
Expression level of Genes
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miRNAs possibly regulated by vista19727[chr15:40397040-40397227]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results