EnhancerDB
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  3. vista19728[chr15:40397293-40397725]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19728[chr15:40397293-40397725]
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Tissue distribution of vista19728
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Transcription factor that possibly regulate vista19728[chr15:40397293-40397725]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 40396907 40397570 E2F1 UCSC Txn Factor no Conserved 108134169
chr15 40396907 40397570 E2F1 UCSC Txn Factor no Conserved 108134170
chr15 40396938 40397363 TFAP2C UCSC Txn Factor no Conserved 108134177
chr15 40396938 40397363 TFAP2C UCSC Txn Factor no Conserved 108134178
chr15 40396948 40397580 CTCF UCSC Txn Factor no Conserved 108134184
chr15 40396948 40397580 CTCF UCSC Txn Factor no Conserved 108134185
chr15 40396952 40397388 MAX UCSC Txn Factor no Conserved 108134186
chr15 40396952 40397388 MAX UCSC Txn Factor no Conserved 108134187
chr15 40396965 40397475 E2F6 UCSC Txn Factor no Conserved 108134190
chr15 40396965 40397475 E2F6 UCSC Txn Factor no Conserved 108134191
chr15 40396984 40397598 TFAP2A UCSC Txn Factor no Conserved 108134207
chr15 40396984 40397598 TFAP2A UCSC Txn Factor no Conserved 108134208
chr15 40397018 40397333 ZNF143 UCSC Txn Factor no Conserved 108134231
chr15 40397018 40397333 ZNF143 UCSC Txn Factor no Conserved 108134232
chr15 40397020 40397303 RAD21 UCSC Txn Factor no Conserved 108134234
chr15 40397020 40397303 RAD21 UCSC Txn Factor no Conserved 108134235
chr15 40397387 40397703 EBF1 UCSC Txn Factor no Conserved 108134308
chr15 40397422 40397672 SPI1 UCSC Txn Factor no Conserved 108134309
chr15 40397544 40398151 RELA UCSC Txn Factor no Conserved 108134317
chr15 40397612 40398599 POLR2A UCSC Txn Factor no Conserved 108134318
chr15 40397290 40397306 SOX4 JASPAR yes 22930085
chr15 40397290 40397306 SOX4 JASPAR yes 70511898
chr15 40397293 40397296 MYB TRANSFAC yes 22930086
chr15 40397293 40397296 MYB TRANSFAC yes 70511899
chr15 40397344 40397358 NR2F1 JASPAR yes 22930087
chr15 40397344 40397358 NR2F1 JASPAR yes 70511900
chr15 40397344 40397359 NR2C2 JASPAR yes 22930088
chr15 40397344 40397359 NR2C2 JASPAR yes 70511901
chr15 40397352 40397362 SP1 JASPAR yes 22930089
chr15 40397352 40397362 SP1 JASPAR yes 70511902
chr15 40397353 40397364 E2F6 JASPAR yes 22930090
chr15 40397353 40397364 E2F6 JASPAR yes 70511903
chr15 40397380 40397395 FOXP1 JASPAR yes 22930091
chr15 40397380 40397395 FOXP1 JASPAR yes 70511904
chr15 40397383 40397394 FOXP2 JASPAR yes 22930092
chr15 40397383 40397394 FOXP2 JASPAR yes 70511905
chr15 40397394 40397398 NFE TRANSFAC yes 22930093
chr15 40397394 40397398 NFE TRANSFAC yes 70511906
chr15 40397399 40397402 MYB TRANSFAC yes 22930094
chr15 40397399 40397402 MYB TRANSFAC yes 70511907
chr15 40397401 40397411 SP1 JASPAR yes 22930095
chr15 40397401 40397411 SP1 JASPAR yes 70511908
chr15 40397418 40397425 CEBPA TRANSFAC yes 22930096
chr15 40397418 40397425 CEBPA TRANSFAC yes 70511909
chr15 40397423 40397427 LFA1 TRANSFAC yes 22930097
chr15 40397423 40397427 LFA1 TRANSFAC yes 70511910
chr15 40397428 40397432 YY1 TRANSFAC yes 22930098
chr15 40397428 40397432 YY1 TRANSFAC yes 70511911
chr15 40397428 40397443 STAT1 JASPAR yes 22930099
chr15 40397428 40397443 STAT1 JASPAR yes 70511912
chr15 40397430 40397441 STAT1 JASPAR yes 22930100
chr15 40397430 40397441 STAT1 JASPAR yes 70511913
chr15 40397432 40397443 HOXC11 JASPAR yes 22930101
chr15 40397432 40397443 HOXC13 JASPAR yes 22930102
chr15 40397432 40397443 HOXC11 JASPAR yes 70511914
chr15 40397432 40397443 HOXC13 JASPAR yes 70511915
chr15 40397433 40397442 CDX1 JASPAR yes 22930103
chr15 40397433 40397442 CDX1 JASPAR yes 70511916
chr15 40397433 40397443 HOXA13 JASPAR yes 22930104
chr15 40397433 40397443 HOXB13 JASPAR yes 22930105
chr15 40397433 40397443 HOXC10 JASPAR yes 22930106
chr15 40397433 40397443 HOXD11 JASPAR yes 22930107
chr15 40397433 40397443 HOXD13 JASPAR yes 22930108
chr15 40397433 40397443 HOXA13 JASPAR yes 70511917
chr15 40397433 40397443 HOXB13 JASPAR yes 70511918
chr15 40397433 40397443 HOXC10 JASPAR yes 70511919
chr15 40397433 40397443 HOXD11 JASPAR yes 70511920
chr15 40397433 40397443 HOXD13 JASPAR yes 70511921
chr15 40397447 40397451 YY1 TRANSFAC yes 22930109
chr15 40397447 40397451 YY1 TRANSFAC yes 70511922
chr15 40397464 40397476 PROX1 JASPAR yes 22930110
chr15 40397464 40397476 PROX1 JASPAR yes 70511923
chr15 40397503 40397517 TLX1 JASPAR yes 22930111
chr15 40397503 40397517 TLX1 JASPAR yes 70511924
chr15 40397527 40397548 ZNF263 JASPAR yes 22930112
chr15 40397527 40397548 ZNF263 JASPAR yes 70511925
chr15 40397535 40397556 IRF1 JASPAR yes 22930113
chr15 40397535 40397556 IRF1 JASPAR yes 70511926
chr15 40397538 40397552 SPI1 JASPAR yes 22930114
chr15 40397538 40397552 SPI1 JASPAR yes 70511927
chr15 40397543 40397557 PLAG1 JASPAR yes 22930115
chr15 40397543 40397557 PLAG1 JASPAR yes 70511928
chr15 40397547 40397557 TBR1 JASPAR yes 22930116
chr15 40397547 40397557 TBR1 JASPAR yes 70511929
chr15 40397557 40397567 NFKB1 JASPAR yes 22930117
chr15 40397557 40397567 NFKB1 JASPAR yes 70511930
chr15 40397564 40397575 USF2 JASPAR yes 22930118
chr15 40397564 40397575 USF2 JASPAR yes 70511931
chr15 40397565 40397575 MAX JASPAR yes 22930119
chr15 40397565 40397575 MAX JASPAR yes 70511932
chr15 40397579 40397584 SP1 TRANSFAC yes 22930120
chr15 40397579 40397584 SP1 TRANSFAC yes 70511933
chr15 40397602 40397612 SP1 JASPAR yes 22930121
chr15 40397602 40397612 SP1 JASPAR yes 70511934
chr15 40397603 40397614 E2F6 JASPAR yes 22930122
chr15 40397603 40397614 E2F6 JASPAR yes 70511935
chr15 40397623 40397634 NFKB1 JASPAR yes 22930123
chr15 40397623 40397634 NFKB1 JASPAR yes 70511936
chr15 40397623 40397636 NFKB2 JASPAR yes 22930124
chr15 40397623 40397636 NFKB2 JASPAR yes 70511937
chr15 40397624 40397634 REL JASPAR yes 22930125
chr15 40397624 40397634 REL JASPAR yes 70511938
chr15 40397624 40397635 NFKB1 JASPAR yes 22930126
chr15 40397624 40397635 NFKB1 JASPAR yes 70511939
chr15 40397667 40397682 TFAP2C JASPAR yes 22930127
chr15 40397667 40397682 TFAP2C JASPAR yes 70511940
chr15 40397670 40397681 EBF1 JASPAR yes 22930128
chr15 40397670 40397681 EBF1 JASPAR yes 70511941
chr15 40397670 40397689 RFX2 JASPAR yes 22930129
chr15 40397670 40397689 RFX2 JASPAR yes 70511942
chr15 40397677 40397681 LFA1 TRANSFAC yes 22930130
chr15 40397677 40397681 LFA1 TRANSFAC yes 70511943
chr15 40397677 40397690 SCRT2 JASPAR yes 22930131
chr15 40397677 40397690 SCRT2 JASPAR yes 70511944
chr15 40397701 40397721 TP63 JASPAR yes 22930132
chr15 40397701 40397721 TP63 JASPAR yes 70511945
SNP sites on vista19728[chr15:40397293-40397725]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 40397421 rs62018159 G A
CEBPA CTCF E2F1 E2F6 EBF1 TFAP2A
3910754
chr15 40397476 rs191791708 G A,C
CTCF E2F1 EBF1 PROX1 SPI1 TFAP2A
3910755
chr15 40397640 rs536497285 T C
EBF1 POLR2A RELA SPI1
3910756
chr15 40397662 rs60219486 C T
EBF1 POLR2A RELA SPI1
3910757
chr15 40397708 rs565162658 G C
POLR2A RELA TP63
3910758
Genes possibly regulated by vista19728[chr15:40397293-40397725]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 40327940 40331389 - SRP14 ENSG00000140319.6 40331389 0.68 0.99 13799 34096
chr15 40380091 40401093 - BMF ENSG00000104081.9 40401093 0.87 0.99 13800 96632
chr15 40453224 40513337 + BUB1B ENSG00000156970.8 40453224 0.92 0.99 13801 44501
Expression level of Genes
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miRNAs possibly regulated by vista19728[chr15:40397293-40397725]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results