EnhancerDB
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  3. vista19740[chr15:40803808-40804249]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19740[chr15:40803808-40804249]
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Tissue distribution of vista19740
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Transcription factor that possibly regulate vista19740[chr15:40803808-40804249]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 40803574 40804351 PHF8 UCSC Txn Factor no Conserved 108134465
chr15 40803574 40804351 PHF8 UCSC Txn Factor no Conserved 108134466
chr15 40803816 40804351 E2F1 UCSC Txn Factor no Conserved 108134511
chr15 40803854 40804149 UBTF UCSC Txn Factor no Conserved 108134522
chr15 40804101 40804425 CEBPB UCSC Txn Factor no Conserved 108134536
chr15 40803847 40803858 NRF1 JASPAR yes 22943919
chr15 40803847 40803858 NRF1 JASPAR yes 70512522
chr15 40803854 40803858 LFA1 TRANSFAC yes 22943920
chr15 40803854 40803858 LFA1 TRANSFAC yes 70512523
chr15 40803874 40803885 E2F6 JASPAR yes 22943921
chr15 40803874 40803885 E2F6 JASPAR yes 70512524
chr15 40803880 40803891 EBF1 JASPAR yes 22943922
chr15 40803880 40803891 EBF1 JASPAR yes 70512525
chr15 40803881 40803887 MZF1 JASPAR yes 22943923
chr15 40803881 40803887 MZF1 JASPAR yes 70512526
chr15 40803882 40803891 TFAP2A JASPAR yes 22943924
chr15 40803882 40803891 TFAP2A JASPAR yes 70512527
chr15 40803883 40803904 REST JASPAR yes 22943925
chr15 40803883 40803904 REST JASPAR yes 70512528
chr15 40803894 40803898 ESR1 TRANSFAC yes 22943926
chr15 40803894 40803898 ESR1 TRANSFAC yes 70512529
chr15 40803896 40803907 ESRRB JASPAR yes 22943927
chr15 40803896 40803907 ESRRB JASPAR yes 70512530
chr15 40803898 40803912 NR2F1 JASPAR yes 22943928
chr15 40803898 40803912 NR2F1 JASPAR yes 70512531
chr15 40803900 40803904 ESR1 TRANSFAC yes 22943929
chr15 40803900 40803904 ESR1 TRANSFAC yes 70512532
chr15 40803932 40803937 SP1 TRANSFAC yes 22943930
chr15 40803932 40803937 SP1 TRANSFAC yes 70512533
chr15 40803932 40803938 SP1 TRANSFAC yes 22943931
chr15 40803932 40803938 SP1 TRANSFAC yes 70512534
chr15 40803939 40803953 TLX1 JASPAR yes 22943932
chr15 40803939 40803953 TLX1 JASPAR yes 70512535
chr15 40803945 40803960 TFAP2A JASPAR yes 22943933
chr15 40803945 40803960 TFAP2A JASPAR yes 70512536
chr15 40803947 40803962 TFAP2C JASPAR yes 22943934
chr15 40803947 40803962 TFAP2C JASPAR yes 70512537
chr15 40803968 40803973 SP1 TRANSFAC yes 22943935
chr15 40803968 40803973 SP1 TRANSFAC yes 70512538
chr15 40803968 40803974 SP1 TRANSFAC yes 22943936
chr15 40803968 40803974 SP1 TRANSFAC yes 70512539
chr15 40803986 40803997 NRF1 JASPAR yes 22943937
chr15 40803986 40803997 NRF1 JASPAR yes 70512540
chr15 40804000 40804019 CTCF JASPAR yes 22943938
chr15 40804000 40804019 CTCF JASPAR yes 70512541
chr15 40804004 40804019 TFAP2C JASPAR yes 22943939
chr15 40804004 40804019 TFAP2C JASPAR yes 70512542
chr15 40804006 40804019 TFAP2A JASPAR yes 22943940
chr15 40804006 40804019 TFAP2B JASPAR yes 22943941
chr15 40804006 40804019 TFAP2C JASPAR yes 22943942
chr15 40804006 40804019 TFAP2A JASPAR yes 70512543
chr15 40804006 40804019 TFAP2B JASPAR yes 70512544
chr15 40804006 40804019 TFAP2C JASPAR yes 70512545
chr15 40804007 40804018 EBF1 JASPAR yes 22943943
chr15 40804007 40804018 EBF1 JASPAR yes 70512546
chr15 40804013 40804019 SP1 TRANSFAC yes 22943944
chr15 40804013 40804019 SP1 TRANSFAC yes 70512547
chr15 40804014 40804019 SP1 TRANSFAC yes 22943945
chr15 40804014 40804019 SP1 TRANSFAC yes 70512548
chr15 40804040 40804059 PAX5 JASPAR yes 22943946
chr15 40804040 40804059 PAX5 JASPAR yes 70512549
chr15 40804042 40804047 SP1 TRANSFAC yes 22943947
chr15 40804042 40804047 SP1 TRANSFAC yes 70512550
chr15 40804043 40804053 SP1 JASPAR yes 22943948
chr15 40804043 40804053 SP1 JASPAR yes 70512551
chr15 40804046 40804051 SP1 TRANSFAC yes 22943949
chr15 40804046 40804051 SP1 TRANSFAC yes 70512552
chr15 40804046 40804052 SP1 TRANSFAC yes 22943950
chr15 40804046 40804052 SP1 TRANSFAC yes 70512553
chr15 40804050 40804055 SP1 TRANSFAC yes 22943951
chr15 40804050 40804055 SP1 TRANSFAC yes 70512554
chr15 40804073 40804085 HINFP JASPAR yes 22943952
chr15 40804073 40804085 HINFP JASPAR yes 70512555
chr15 40804090 40804105 AR JASPAR yes 22943953
chr15 40804090 40804105 AR JASPAR yes 70512556
chr15 40804100 40804114 GLIS2 JASPAR yes 22943954
chr15 40804100 40804114 GLIS3 JASPAR yes 22943955
chr15 40804100 40804114 GLIS2 JASPAR yes 70512557
chr15 40804100 40804114 GLIS3 JASPAR yes 70512558
chr15 40804103 40804119 ZNF143 JASPAR yes 22943956
chr15 40804103 40804119 ZNF143 JASPAR yes 70512559
chr15 40804110 40804116 YY1 JASPAR yes 22943957
chr15 40804110 40804116 YY1 JASPAR yes 70512560
chr15 40804113 40804126 TFAP2A JASPAR yes 22943958
chr15 40804113 40804126 TFAP2B JASPAR yes 22943959
chr15 40804113 40804126 TFAP2C JASPAR yes 22943960
chr15 40804113 40804126 TFAP2A JASPAR yes 70512561
chr15 40804113 40804126 TFAP2B JASPAR yes 70512562
chr15 40804113 40804126 TFAP2C JASPAR yes 70512563
chr15 40804120 40804125 SP1 TRANSFAC yes 22943961
chr15 40804120 40804125 SP1 TRANSFAC yes 70512564
chr15 40804120 40804131 NRF1 JASPAR yes 22943962
chr15 40804120 40804131 NRF1 JASPAR yes 70512565
chr15 40804145 40804152 NFATC2 JASPAR yes 22943963
chr15 40804145 40804152 NFATC2 JASPAR yes 70512566
chr15 40804163 40804168 MYB TRANSFAC yes 22943964
chr15 40804163 40804168 MYB TRANSFAC yes 70512567
chr15 40804204 40804217 ZBTB18 JASPAR yes 22943965
chr15 40804204 40804217 ZBTB18 JASPAR yes 70512568
chr15 40804206 40804215 SNAI2 JASPAR yes 22943966
chr15 40804206 40804215 SNAI2 JASPAR yes 70512569
chr15 40804206 40804216 FIGLA JASPAR yes 22943967
chr15 40804206 40804216 ID4 JASPAR yes 22943968
chr15 40804206 40804216 TCF3 JASPAR yes 22943969
chr15 40804206 40804216 TCF4 JASPAR yes 22943970
chr15 40804206 40804216 FIGLA JASPAR yes 70512570
chr15 40804206 40804216 ID4 JASPAR yes 70512571
chr15 40804206 40804216 TCF3 JASPAR yes 70512572
chr15 40804206 40804216 TCF4 JASPAR yes 70512573
chr15 40804208 40804217 ZEB1 JASPAR yes 22943971
chr15 40804208 40804217 ZEB1 JASPAR yes 70512574
chr15 40804209 40804217 TBX5 JASPAR yes 22943972
chr15 40804209 40804217 TBX5 JASPAR yes 70512575
chr15 40804219 40804233 RORA JASPAR yes 22943973
chr15 40804219 40804233 RORA JASPAR yes 70512576
chr15 40804222 40804232 RORA JASPAR yes 22943974
chr15 40804222 40804232 RORA JASPAR yes 70512577
chr15 40804223 40804234 ESRRA JASPAR yes 22943975
chr15 40804223 40804234 ESRRA JASPAR yes 70512578
chr15 40804223 40804236 NR2F1 JASPAR yes 22943976
chr15 40804223 40804236 NR2F1 JASPAR yes 70512579
chr15 40804227 40804231 ESR1 TRANSFAC yes 22943977
chr15 40804227 40804231 ESR1 TRANSFAC yes 70512580
chr15 40804248 40804263 JUND JASPAR yes 22943978
chr15 40804248 40804263 JUND JASPAR yes 70512581
chr15 40804249 40804262 JUN JASPAR yes 22943979
chr15 40804249 40804262 JUN JASPAR yes 70512582
SNP sites on vista19740[chr15:40803808-40804249]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 40803833 rs552195578 G GT
E2F1 PHF8
3912869
chr15 40803862 rs56282449 T C
E2F1 PHF8 UBTF
3912870
chr15 40803867 rs558333706 T C
E2F1 PHF8 UBTF
3912871
chr15 40803932 rs578196139 A G
E2F1 PHF8 SP1 UBTF
3912872
chr15 40803968 rs114122064 G A
E2F1 PHF8 SP1 UBTF
3912873
chr15 40804071 rs2959545 T G
E2F1 PHF8 UBTF
3912874
chr15 40804222 rs189102195 A C,G
CEBPB E2F1 PHF8 RORA
3912875
Genes possibly regulated by vista19740[chr15:40803808-40804249]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 40731920 40760441 + BAHD1 ENSG00000140320.7 40731920 0.7 1.0 13812 28112
chr15 40763160 40765353 + CHST14 ENSG00000169105.6 40763160 0.7 1.0 13813 59352
chr15 40820882 40857256 - C15orf57 ENSG00000128891.11 40857256 0.84 0.99 13814 46993
chr15 40861499 40866659 + RPUSD2 ENSG00000166133.13 40861499 0.71 1.0 13815 42750
chr15 40886218 40956540 + CASC5 ENSG00000137812.15 40886218 0.93 0.98 13816 18031
Expression level of Genes
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miRNAs possibly regulated by vista19740[chr15:40803808-40804249]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results