EnhancerDB
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  3. vista19741[chr15:41074954-41075332]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19741[chr15:41074954-41075332]
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Tissue distribution of vista19741
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Transcription factor that possibly regulate vista19741[chr15:41074954-41075332]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 41074791 41075217 CTCF UCSC Txn Factor no Conserved 108134548
chr15 41074824 41075146 ZNF263 UCSC Txn Factor no Conserved 108134558
chr15 41074859 41075153 SMC3 UCSC Txn Factor no Conserved 108134573
chr15 41074884 41075129 RAD21 UCSC Txn Factor no Conserved 108134582
chr15 41075000 41075019 CTCF JASPAR yes 22953197
chr15 41075000 41075019 CTCF JASPAR yes 70512583
chr15 41075003 41075017 ZIC1 JASPAR yes 22953198
chr15 41075003 41075017 ZIC1 JASPAR yes 70512584
chr15 41075003 41075018 ZIC3 JASPAR yes 22953199
chr15 41075003 41075018 ZIC4 JASPAR yes 22953200
chr15 41075003 41075018 ZIC3 JASPAR yes 70512585
chr15 41075003 41075018 ZIC4 JASPAR yes 70512586
chr15 41075005 41075014 SNAI2 JASPAR yes 22953201
chr15 41075005 41075014 SNAI2 JASPAR yes 70512587
chr15 41075006 41075011 USF2 TRANSFAC yes 22953202
chr15 41075006 41075011 USF2 TRANSFAC yes 70512588
chr15 41075014 41075033 RFX2 JASPAR yes 22953203
chr15 41075014 41075033 RFX2 JASPAR yes 70512589
chr15 41075026 41075030 LFA1 TRANSFAC yes 22953204
chr15 41075026 41075030 LFA1 TRANSFAC yes 70512590
chr15 41075026 41075038 HES7 JASPAR yes 22953205
chr15 41075026 41075038 HES7 JASPAR yes 70512591
chr15 41075027 41075037 HEY2 JASPAR yes 22953206
chr15 41075027 41075037 ID4 JASPAR yes 22953207
chr15 41075027 41075037 TCF4 JASPAR yes 22953208
chr15 41075027 41075037 HEY2 JASPAR yes 70512592
chr15 41075027 41075037 ID4 JASPAR yes 70512593
chr15 41075027 41075037 TCF4 JASPAR yes 70512594
chr15 41075028 41075037 SNAI2 JASPAR yes 22953209
chr15 41075028 41075037 SNAI2 JASPAR yes 70512595
chr15 41075029 41075034 USF2 TRANSFAC yes 22953210
chr15 41075029 41075034 USF2 TRANSFAC yes 70512596
chr15 41075031 41075050 RFX2 JASPAR yes 22953211
chr15 41075031 41075050 RFX2 JASPAR yes 70512597
chr15 41075048 41075060 FOXI1 JASPAR yes 22953212
chr15 41075048 41075060 FOXI1 JASPAR yes 70512598
chr15 41075068 41075081 TFAP2A JASPAR yes 22953213
chr15 41075068 41075081 TFAP2B JASPAR yes 22953214
chr15 41075068 41075081 TFAP2C JASPAR yes 22953215
chr15 41075068 41075081 TFAP2A JASPAR yes 70512599
chr15 41075068 41075081 TFAP2B JASPAR yes 70512600
chr15 41075068 41075081 TFAP2C JASPAR yes 70512601
chr15 41075084 41075105 REST JASPAR yes 22953216
chr15 41075084 41075105 REST JASPAR yes 70512602
chr15 41075106 41075110 LFA1 TRANSFAC yes 22953217
chr15 41075106 41075110 LFA1 TRANSFAC yes 70512603
chr15 41075126 41075138 PKNOX2 JASPAR yes 22953218
chr15 41075126 41075138 PKNOX2 JASPAR yes 70512604
chr15 41075128 41075137 SNAI2 JASPAR yes 22953219
chr15 41075128 41075137 SNAI2 JASPAR yes 70512605
chr15 41075129 41075134 USF2 TRANSFAC yes 22953220
chr15 41075129 41075134 USF2 TRANSFAC yes 70512606
chr15 41075140 41075144 H1TF2 TRANSFAC yes 22953221
chr15 41075140 41075144 NFE TRANSFAC yes 22953222
chr15 41075140 41075144 SRF TRANSFAC yes 22953223
chr15 41075140 41075144 H1TF2 TRANSFAC yes 70512607
chr15 41075140 41075144 NFE TRANSFAC yes 70512608
chr15 41075140 41075144 SRF TRANSFAC yes 70512609
chr15 41075143 41075155 ZBTB7A JASPAR yes 22953224
chr15 41075143 41075155 ZBTB7A JASPAR yes 70512610
chr15 41075144 41075156 ZBTB7B JASPAR yes 22953225
chr15 41075144 41075156 ZBTB7C JASPAR yes 22953226
chr15 41075144 41075156 ZBTB7B JASPAR yes 70512611
chr15 41075144 41075156 ZBTB7C JASPAR yes 70512612
chr15 41075156 41075169 ZBTB18 JASPAR yes 22953227
chr15 41075156 41075169 ZBTB18 JASPAR yes 70512613
chr15 41075175 41075190 NR2C2 JASPAR yes 22953228
chr15 41075175 41075190 NR2C2 JASPAR yes 70512614
chr15 41075179 41075200 ZNF263 JASPAR yes 22953229
chr15 41075179 41075200 ZNF263 JASPAR yes 70512615
chr15 41075188 41075191 MYB TRANSFAC yes 22953230
chr15 41075188 41075191 MYB TRANSFAC yes 70512616
chr15 41075205 41075220 FOXP1 JASPAR yes 22953231
chr15 41075205 41075220 FOXP1 JASPAR yes 70512617
chr15 41075206 41075217 FOXP2 JASPAR yes 22953232
chr15 41075206 41075217 FOXP2 JASPAR yes 70512618
chr15 41075208 41075216 FOXO3 JASPAR yes 22953233
chr15 41075208 41075216 FOXO3 JASPAR yes 70512619
chr15 41075229 41075246 ZNF410 JASPAR yes 22953234
chr15 41075229 41075246 ZNF410 JASPAR yes 70512620
chr15 41075233 41075248 PRDM1 JASPAR yes 22953235
chr15 41075233 41075248 PRDM1 JASPAR yes 70512621
chr15 41075299 41075303 H4TF2 TRANSFAC yes 22953236
chr15 41075299 41075303 H4TF2 TRANSFAC yes 70512622
chr15 41075303 41075311 GATA5 JASPAR yes 22953237
chr15 41075303 41075311 GATA5 JASPAR yes 70512623
chr15 41075320 41075341 IRF1 JASPAR yes 22953238
chr15 41075320 41075341 IRF1 JASPAR yes 70512624
SNP sites on vista19741[chr15:41074954-41075332]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 41074994 rs57096780 A G
CTCF RAD21 SMC3 ZNF263
3914069
chr15 41075014 rs376062723 T G
CTCF RAD21 RFX2 SMC3 SNAI2 ZIC1 ZIC3 ZIC4 ZNF263
3914070
chr15 41075021 rs34814635 T C
CTCF RAD21 RFX2 SMC3 ZNF263
3914071
chr15 41075132 rs547721116 C T
CTCF PKNOX2 SMC3 SNAI2 USF2 ZNF263
3914072
chr15 41075147 rs57272245 G A
CTCF SMC3 ZBTB7A ZBTB7B ZBTB7C
3914073
chr15 41075278 rs59349461 AAT A no 3914074
chr15 41075278 rs796989858 AAT A no 3914075
Genes possibly regulated by vista19741[chr15:41074954-41075332]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 40986972 41024354 + RAD51 ENSG00000051180.12 40986972 0.94 0.99 13817 12018
chr15 41028082 41048049 - RMDN3 ENSG00000137824.11 41048049 0.63 0.99 13818 73095
chr15 41056218 41059906 + GCHFR ENSG00000137880.4 41056218 0.93 0.91 13819 81264
chr15 41060067 41099675 - DNAJC17 ENSG00000104129.5 41099675 0.55 1.0 13820 75657
chr15 41062159 41064643 + C15orf62 ENSG00000188277.8 41062159 0.85 1.0 13821 87205
chr15 41099284 41106767 + ZFYVE19 ENSG00000166140.13 41099284 0.59 1.0 13822 76048
chr15 41107650 41120907 - PPP1R14D ENSG00000166143.5 41120907 0.99 0.95 13823 54425
chr15 41136216 41150405 + SPINT1 ENSG00000166145.10 41136216 0.77 1.0 13824 39116
chr15 41164412 41166487 - RHOV ENSG00000104140.6 41166487 0.97 0.99 13825 8845
Expression level of Genes
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miRNAs possibly regulated by vista19741[chr15:41074954-41075332]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results