EnhancerDB
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  3. vista19756[chr15:41741039-41741403]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19756[chr15:41741039-41741403]
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Tissue distribution of vista19756
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Transcription factor that possibly regulate vista19756[chr15:41741039-41741403]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 41741044 41741056 FOXC2 JASPAR yes 70513479
chr15 41741045 41741056 FOXC1 JASPAR yes 70513480
chr15 41741046 41741050 YY1 TRANSFAC yes 70513481
chr15 41741056 41741066 PAX3 JASPAR yes 70513482
chr15 41741056 41741066 PAX7 JASPAR yes 70513483
chr15 41741059 41741073 POU1F1 JASPAR yes 70513484
chr15 41741068 41741079 PHOX2A JASPAR yes 70513485
chr15 41741068 41741079 PROP1 JASPAR yes 70513486
chr15 41741072 41741085 DUXA JASPAR yes 70513487
chr15 41741073 41741084 DUX4 JASPAR yes 70513488
chr15 41741073 41741084 PHOX2A JASPAR yes 70513489
chr15 41741073 41741084 PROP1 JASPAR yes 70513490
chr15 41741076 41741089 DUXA JASPAR yes 70513491
chr15 41741077 41741088 DUX4 JASPAR yes 70513492
chr15 41741077 41741088 PHOX2A JASPAR yes 70513493
chr15 41741077 41741088 PROP1 JASPAR yes 70513494
chr15 41741078 41741088 PAX3 JASPAR yes 70513495
chr15 41741078 41741088 PAX7 JASPAR yes 70513496
chr15 41741080 41741090 GSX1 JASPAR yes 70513497
chr15 41741080 41741090 GSX2 JASPAR yes 70513498
chr15 41741080 41741090 LHX2 JASPAR yes 70513499
chr15 41741080 41741090 LHX6 JASPAR yes 70513500
chr15 41741080 41741090 MNX1 JASPAR yes 70513501
chr15 41741080 41741090 NOTO JASPAR yes 70513502
chr15 41741080 41741090 POU6F1 JASPAR yes 70513503
chr15 41741080 41741090 RAX JASPAR yes 70513504
chr15 41741081 41741089 ISX JASPAR yes 70513505
chr15 41741081 41741089 LMX1A JASPAR yes 70513506
chr15 41741081 41741089 LMX1B JASPAR yes 70513507
chr15 41741081 41741089 NKX6-1 JASPAR yes 70513508
chr15 41741081 41741089 NKX6-2 JASPAR yes 70513509
chr15 41741081 41741089 PRRX1 JASPAR yes 70513510
chr15 41741081 41741089 RAX2 JASPAR yes 70513511
chr15 41741081 41741089 SHOX JASPAR yes 70513512
chr15 41741081 41741089 UNCX JASPAR yes 70513513
chr15 41741081 41741089 VAX1 JASPAR yes 70513514
chr15 41741081 41741094 DUXA JASPAR yes 70513515
chr15 41741081 41741095 POU4F1 JASPAR yes 70513516
chr15 41741082 41741092 PAX3 JASPAR yes 70513517
chr15 41741082 41741092 PAX7 JASPAR yes 70513518
chr15 41741082 41741093 DUX4 JASPAR yes 70513519
chr15 41741082 41741093 PHOX2A JASPAR yes 70513520
chr15 41741082 41741093 PROP1 JASPAR yes 70513521
chr15 41741084 41741098 POU4F1 JASPAR yes 70513522
chr15 41741086 41741097 PHOX2A JASPAR yes 70513523
chr15 41741086 41741097 PROP1 JASPAR yes 70513524
chr15 41741088 41741100 FOXI1 JASPAR yes 70513525
chr15 41741089 41741101 FOXC2 JASPAR yes 70513526
chr15 41741091 41741095 YY1 TRANSFAC yes 70513527
chr15 41741095 41741099 YY1 TRANSFAC yes 70513528
chr15 41741116 41741120 NFE TRANSFAC yes 70513529
chr15 41741143 41741151 NR4A2 JASPAR yes 70513530
chr15 41741146 41741165 PAX5 JASPAR yes 70513531
chr15 41741157 41741172 HNF4A JASPAR yes 70513532
chr15 41741158 41741173 HNF4G JASPAR yes 70513533
chr15 41741220 41741224 TEAD2 TRANSFAC yes 70513534
chr15 41741227 41741238 YY2 JASPAR yes 70513535
chr15 41741231 41741237 YY1 JASPAR yes 70513536
chr15 41741237 41741242 SP1 TRANSFAC yes 70513537
chr15 41741255 41741259 YY1 TRANSFAC yes 70513538
chr15 41741273 41741284 CEBPB JASPAR yes 70513539
chr15 41741276 41741288 YY1 JASPAR yes 70513540
chr15 41741300 41741315 HNF4A JASPAR yes 70513541
chr15 41741301 41741315 NR2F1 JASPAR yes 70513542
chr15 41741301 41741315 RXRG JASPAR yes 70513543
chr15 41741301 41741316 HNF4G JASPAR yes 70513544
chr15 41741301 41741316 NR2C2 JASPAR yes 70513545
chr15 41741308 41741315 JUN TRANSFAC yes 70513546
chr15 41741351 41741356 H4TF1 TRANSFAC yes 70513547
chr15 41741381 41741385 YY1 TRANSFAC yes 70513548
chr15 41741382 41741403 IRF1 JASPAR yes 70513549
chr15 41741386 41741390 YY1 TRANSFAC yes 70513550
chr15 41741388 41741403 FOXP1 JASPAR yes 70513551
chr15 41741389 41741401 FOXC2 JASPAR yes 70513552
chr15 41741391 41741395 YY1 TRANSFAC yes 70513553
SNP sites on vista19756[chr15:41741039-41741403]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 41741088 rs200393479 A T
DUX4 DUXA FOXI1 GSX1 GSX2 ISX LHX2 LHX6 LMX1A LMX1B MNX1 NKX6-1 NKX6-2 NOTO PAX3 PAX7 PHOX2A POU4F1 POU6F1 PROP1 PRRX1 RAX RAX2 SHOX UNCX VAX1
3917530
chr15 41741144 rs150920640 G A
NR4A2
3917531
chr15 41741362 rs191021971 G A no 3917532
Genes possibly regulated by vista19756[chr15:41741039-41741403]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 41679551 41694717 - NDUFAF1 ENSG00000137806.4 41694717 0.61 0.98 13834 53678
chr15 41700606 41775761 + RTF1 ENSG00000137815.10 41700606 0.57 0.99 13835 59567
chr15 41785591 41795747 + ITPKA ENSG00000137825.6 41785591 0.92 1.0 13836 55812
chr15 41795836 41806085 - LTK ENSG00000062524.11 41806085 0.94 1.0 13837 35318
chr15 41809374 41836467 - RPAP1 ENSG00000103932.7 41836467 0.63 1.0 13838 4936
Expression level of Genes
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miRNAs possibly regulated by vista19756[chr15:41741039-41741403]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results