EnhancerDB
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  3. vista19766[chr15:42221521-42221787]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19766[chr15:42221521-42221787]
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Tissue distribution of vista19766
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Transcription factor that possibly regulate vista19766[chr15:42221521-42221787]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 42221424 42221680 EBF1 UCSC Txn Factor no Conserved 108135238
chr15 42221463 42221744 RUNX3 UCSC Txn Factor no Conserved 108135247
chr15 42221523 42221818 USF2 UCSC Txn Factor no Conserved 108135254
chr15 42221651 42221799 GATA3 UCSC Txn Factor no Conserved 108135264
chr15 42221521 42221524 MYB TRANSFAC yes 23006409
chr15 42221521 42221524 MYB TRANSFAC yes 70513995
chr15 42221534 42221544 MAX JASPAR yes 23006410
chr15 42221534 42221544 MAX JASPAR yes 70513996
chr15 42221534 42221545 USF2 JASPAR yes 23006411
chr15 42221534 42221545 USF2 JASPAR yes 70513997
chr15 42221543 42221557 PLAG1 JASPAR yes 23006412
chr15 42221543 42221557 PLAG1 JASPAR yes 70513998
chr15 42221551 42221566 TFAP2C JASPAR yes 23006413
chr15 42221551 42221566 TFAP2C JASPAR yes 70513999
chr15 42221553 42221559 SP1 TRANSFAC yes 23006414
chr15 42221553 42221559 SP1 TRANSFAC yes 70514000
chr15 42221553 42221566 TFAP2A JASPAR yes 23006415
chr15 42221553 42221566 TFAP2B JASPAR yes 23006416
chr15 42221553 42221566 TFAP2C JASPAR yes 23006417
chr15 42221553 42221566 TFAP2A JASPAR yes 70514001
chr15 42221553 42221566 TFAP2B JASPAR yes 70514002
chr15 42221553 42221566 TFAP2C JASPAR yes 70514003
chr15 42221554 42221565 EBF1 JASPAR yes 23006418
chr15 42221554 42221565 EBF1 JASPAR yes 70514004
chr15 42221561 42221565 LFA1 TRANSFAC yes 23006419
chr15 42221561 42221565 LFA1 TRANSFAC yes 70514005
chr15 42221566 42221572 SP1 TRANSFAC yes 23006420
chr15 42221566 42221572 SP1 TRANSFAC yes 70514006
chr15 42221566 42221577 E2F1 JASPAR yes 23006421
chr15 42221566 42221577 E2F1 JASPAR yes 70514007
chr15 42221567 42221572 SP1 TRANSFAC yes 23006422
chr15 42221567 42221572 SP1 TRANSFAC yes 70514008
chr15 42221567 42221578 E2F4 JASPAR yes 23006423
chr15 42221567 42221578 E2F6 JASPAR yes 23006424
chr15 42221567 42221578 E2F4 JASPAR yes 70514009
chr15 42221567 42221578 E2F6 JASPAR yes 70514010
chr15 42221568 42221573 SP1 TRANSFAC yes 23006425
chr15 42221568 42221573 SP1 TRANSFAC yes 70514011
chr15 42221570 42221583 NFKB2 JASPAR yes 23006426
chr15 42221570 42221583 NFKB2 JASPAR yes 70514012
chr15 42221571 42221582 NFKB1 JASPAR yes 23006427
chr15 42221571 42221582 NFKB1 JASPAR yes 70514013
chr15 42221572 42221582 NFKB1 JASPAR yes 23006428
chr15 42221572 42221582 NFKB1 JASPAR yes 70514014
chr15 42221583 42221603 TBX19 JASPAR yes 23006429
chr15 42221583 42221603 TBX19 JASPAR yes 70514015
chr15 42221585 42221601 T JASPAR yes 23006430
chr15 42221585 42221601 T JASPAR yes 70514016
chr15 42221595 42221609 CREB3 JASPAR yes 23006431
chr15 42221595 42221609 CREB3 JASPAR yes 70514017
chr15 42221599 42221614 RUNX2 JASPAR yes 23006432
chr15 42221599 42221614 RUNX2 JASPAR yes 70514018
chr15 42221619 42221626 SPIB JASPAR yes 23006433
chr15 42221619 42221626 SPIB JASPAR yes 70514019
chr15 42221620 42221628 EHF JASPAR yes 23006434
chr15 42221620 42221628 EHF JASPAR yes 70514020
chr15 42221654 42221666 NHLH1 JASPAR yes 23006435
chr15 42221654 42221666 NHLH1 JASPAR yes 70514021
chr15 42221668 42221672 LFA1 TRANSFAC yes 23006436
chr15 42221668 42221672 LFA1 TRANSFAC yes 70514022
chr15 42221669 42221679 TFEB JASPAR yes 23006437
chr15 42221669 42221679 TFEC JASPAR yes 23006438
chr15 42221669 42221679 TFEB JASPAR yes 70514023
chr15 42221669 42221679 TFEC JASPAR yes 70514024
chr15 42221669 42221680 USF1 JASPAR yes 23006439
chr15 42221669 42221680 USF2 JASPAR yes 23006440
chr15 42221669 42221680 USF1 JASPAR yes 70514025
chr15 42221669 42221680 USF2 JASPAR yes 70514026
chr15 42221677 42221692 PRDM1 JASPAR yes 23006441
chr15 42221677 42221692 PRDM1 JASPAR yes 70514027
chr15 42221679 42221700 IRF1 JASPAR yes 23006442
chr15 42221679 42221700 IRF1 JASPAR yes 70514028
chr15 42221683 42221698 PRDM1 JASPAR yes 23006443
chr15 42221683 42221698 PRDM1 JASPAR yes 70514029
chr15 42221709 42221724 PRDM1 JASPAR yes 23006444
chr15 42221709 42221724 PRDM1 JASPAR yes 70514030
chr15 42221711 42221721 NFATC3 JASPAR yes 23006445
chr15 42221711 42221721 NFATC3 JASPAR yes 70514031
chr15 42221752 42221756 YY1 TRANSFAC yes 23006446
chr15 42221752 42221756 YY1 TRANSFAC yes 70514032
chr15 42221768 42221783 TFAP2C JASPAR yes 23006447
chr15 42221768 42221783 TFAP2C JASPAR yes 70514033
chr15 42221769 42221780 EBF1 JASPAR yes 23006448
chr15 42221769 42221780 EBF1 JASPAR yes 70514034
SNP sites on vista19766[chr15:42221521-42221787]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 42221544 rs528379724 T C
EBF1 MAX PLAG1 RUNX3 USF2
3919799
chr15 42221585 rs74777346 A G
EBF1 RUNX3 T TBX19 USF2
3919800
chr15 42221674 rs17842096 T C
EBF1 GATA3 RUNX3 TFEB TFEC USF1 USF2
3919801
chr15 42221734 rs553690931 C A
GATA3 RUNX3 USF2
3919802
Genes possibly regulated by vista19766[chr15:42221521-42221787]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 42140345 42186275 - SPTBN5 ENSG00000137877.8 42186275 0.8 1.0 13846 64754
chr15 42190950 42264776 - EHD4 ENSG00000103966.5 42264776 0.71 1.0 13847 57011
Expression level of Genes
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miRNAs possibly regulated by vista19766[chr15:42221521-42221787]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results