EnhancerDB
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  3. vista19778[chr15:42535686-42535733]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista19778[chr15:42535686-42535733]
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Tissue distribution of vista19778
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Transcription factor that possibly regulate vista19778[chr15:42535686-42535733]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 42535688 42535704 SOX8 JASPAR yes 70514600
chr15 42535696 42535700 H1TF2 TRANSFAC yes 70514601
chr15 42535696 42535700 NFE TRANSFAC yes 70514602
chr15 42535696 42535700 SRF TRANSFAC yes 70514603
chr15 42535697 42535709 POU3F1 JASPAR yes 70514604
chr15 42535697 42535709 POU3F2 JASPAR yes 70514605
chr15 42535701 42535711 EMX1 JASPAR yes 70514606
chr15 42535701 42535711 EMX2 JASPAR yes 70514607
chr15 42535701 42535711 ESX1 JASPAR yes 70514608
chr15 42535701 42535711 GSX1 JASPAR yes 70514609
chr15 42535701 42535711 GSX2 JASPAR yes 70514610
chr15 42535701 42535711 HESX1 JASPAR yes 70514611
chr15 42535701 42535711 HOXB2 JASPAR yes 70514612
chr15 42535701 42535711 HOXB3 JASPAR yes 70514613
chr15 42535701 42535711 LBX2 JASPAR yes 70514614
chr15 42535701 42535711 LHX2 JASPAR yes 70514615
chr15 42535701 42535711 LHX6 JASPAR yes 70514616
chr15 42535701 42535711 MIXL1 JASPAR yes 70514617
chr15 42535701 42535711 MNX1 JASPAR yes 70514618
chr15 42535701 42535711 NOTO JASPAR yes 70514619
chr15 42535701 42535711 POU6F1 JASPAR yes 70514620
chr15 42535701 42535711 RAX JASPAR yes 70514621
chr15 42535702 42535710 ISX JASPAR yes 70514622
chr15 42535702 42535710 LMX1A JASPAR yes 70514623
chr15 42535702 42535710 LMX1B JASPAR yes 70514624
chr15 42535702 42535710 NKX6-1 JASPAR yes 70514625
chr15 42535702 42535710 NKX6-2 JASPAR yes 70514626
chr15 42535702 42535710 PRRX1 JASPAR yes 70514627
chr15 42535702 42535710 RAX2 JASPAR yes 70514628
chr15 42535702 42535710 SHOX JASPAR yes 70514629
chr15 42535702 42535710 UNCX JASPAR yes 70514630
chr15 42535702 42535710 VAX1 JASPAR yes 70514631
chr15 42535702 42535716 ONECUT3 JASPAR yes 70514632
chr15 42535703 42535713 PAX3 JASPAR yes 70514633
chr15 42535703 42535713 PAX7 JASPAR yes 70514634
chr15 42535703 42535714 PHOX2A JASPAR yes 70514635
chr15 42535703 42535714 PROP1 JASPAR yes 70514636
chr15 42535704 42535725 IRF1 JASPAR yes 70514637
chr15 42535705 42535726 IRF1 JASPAR yes 70514638
chr15 42535707 42535728 IRF1 JASPAR yes 70514639
chr15 42535708 42535729 IRF1 JASPAR yes 70514640
chr15 42535709 42535724 FOXP1 JASPAR yes 70514641
chr15 42535709 42535730 IRF1 JASPAR yes 70514642
chr15 42535710 42535725 FOXP1 JASPAR yes 70514643
chr15 42535710 42535731 IRF1 JASPAR yes 70514644
chr15 42535711 42535726 FOXP1 JASPAR yes 70514645
chr15 42535711 42535732 IRF1 JASPAR yes 70514646
chr15 42535712 42535727 FOXP1 JASPAR yes 70514647
chr15 42535713 42535728 FOXP1 JASPAR yes 70514648
chr15 42535714 42535729 FOXP1 JASPAR yes 70514649
chr15 42535715 42535730 FOXP1 JASPAR yes 70514650
chr15 42535716 42535731 FOXP1 JASPAR yes 70514651
chr15 42535717 42535732 FOXP1 JASPAR yes 70514652
chr15 42535718 42535733 FOXP1 JASPAR yes 70514653
SNP sites on vista19778[chr15:42535686-42535733]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 42535710 rs540554292 AT A
EMX1 EMX2 ESX1 FOXP1 GSX1 GSX2 HESX1 HOXB2 HOXB3 IRF1 ISX LBX2 LHX2 LHX6 LMX1A LMX1B MIXL1 MNX1 NKX6-1 NKX6-2 NOTO ONECUT3 PAX3 PAX7 PHOX2A POU6F1 PROP1 PRRX1 RAX RAX2 SHOX UNCX VAX1
3921732
Genes possibly regulated by vista19778[chr15:42535686-42535733]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 42433332 42448839 - PLA2G4F ENSG00000168907.9 42448839 0.95 1.0 13850 13153
chr15 42450899 42500514 - VPS39 ENSG00000166887.11 42500514 0.6 1.0 13851 64828
chr15 42502730 42565861 - TMEM87A ENSG00000103978.11 42565861 0.79 1.0 13852 69872
chr15 42565431 42645864 + GANC ENSG00000214013.5 42565431 0.82 0.99 13853 70302
Expression level of Genes
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miRNAs possibly regulated by vista19778[chr15:42535686-42535733]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results