EnhancerDB
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  3. vista2[chr1:840753-841210]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2[chr1:840753-841210]
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Tissue distribution of vista2
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Transcription factor that possibly regulate vista2[chr1:840753-841210]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 839802 841023 POLR2A UCSC Txn Factor no Conserved 107801756
chr1 840762 840770 EHF JASPAR yes 26171096
chr1 840762 840770 EHF JASPAR yes 118213027
chr1 840795 840808 ELF1 JASPAR yes 26171097
chr1 840795 840808 ELF1 JASPAR yes 118213028
chr1 840796 840806 ELK1 JASPAR yes 26171098
chr1 840796 840806 ELK1 JASPAR yes 118213029
chr1 840796 840808 EHF JASPAR yes 26171099
chr1 840796 840808 ELF1 JASPAR yes 26171100
chr1 840796 840808 ELF4 JASPAR yes 26171101
chr1 840796 840808 EHF JASPAR yes 118213030
chr1 840796 840808 ELF1 JASPAR yes 118213031
chr1 840796 840808 ELF4 JASPAR yes 118213032
chr1 840797 840808 ELF5 JASPAR yes 26171102
chr1 840797 840808 ELF5 JASPAR yes 118213033
chr1 840798 840807 ELK4 JASPAR yes 26171103
chr1 840798 840807 ELK4 JASPAR yes 118213034
chr1 840798 840808 ELK1 JASPAR yes 26171104
chr1 840798 840808 ELK3 JASPAR yes 26171105
chr1 840798 840808 ETS1 JASPAR yes 26171106
chr1 840798 840808 ETV1 JASPAR yes 26171107
chr1 840798 840808 ETV3 JASPAR yes 26171108
chr1 840798 840808 ETV4 JASPAR yes 26171109
chr1 840798 840808 ETV5 JASPAR yes 26171110
chr1 840798 840808 ETV6 JASPAR yes 26171111
chr1 840798 840808 FEV JASPAR yes 26171112
chr1 840798 840808 GABPA JASPAR yes 26171113
chr1 840798 840808 ELK1 JASPAR yes 118213035
chr1 840798 840808 ELK3 JASPAR yes 118213036
chr1 840798 840808 ETS1 JASPAR yes 118213037
chr1 840798 840808 ETV1 JASPAR yes 118213038
chr1 840798 840808 ETV3 JASPAR yes 118213039
chr1 840798 840808 ETV4 JASPAR yes 118213040
chr1 840798 840808 ETV5 JASPAR yes 118213041
chr1 840798 840808 ETV6 JASPAR yes 118213042
chr1 840798 840808 FEV JASPAR yes 118213043
chr1 840798 840808 GABPA JASPAR yes 118213044
chr1 840798 840809 ELK4 JASPAR yes 26171114
chr1 840798 840809 ELK4 JASPAR yes 118213045
chr1 840799 840807 FEV JASPAR yes 26171115
chr1 840799 840807 FEV JASPAR yes 118213046
chr1 840800 840806 ETS1 JASPAR yes 26171116
chr1 840800 840806 SPI1 JASPAR yes 26171117
chr1 840800 840806 ETS1 JASPAR yes 118213047
chr1 840800 840806 SPI1 JASPAR yes 118213048
chr1 840801 840811 NFKB1 JASPAR yes 26171118
chr1 840801 840811 REL JASPAR yes 26171119
chr1 840801 840811 NFKB1 JASPAR yes 118213049
chr1 840801 840811 REL JASPAR yes 118213050
chr1 840801 840812 NFKB1 JASPAR yes 26171120
chr1 840801 840812 NFKB1 JASPAR yes 118213051
chr1 840808 840814 SP1 TRANSFAC yes 26171121
chr1 840808 840814 SP1 TRANSFAC yes 118213052
chr1 840817 840838 REST JASPAR yes 26171122
chr1 840817 840838 REST JASPAR yes 118213053
chr1 840818 840837 REST JASPAR yes 26171123
chr1 840818 840837 REST JASPAR yes 118213054
chr1 840820 840834 EBF1 JASPAR yes 26171124
chr1 840820 840834 EBF1 JASPAR yes 118213055
chr1 840821 840832 EBF1 JASPAR yes 26171125
chr1 840821 840832 EBF1 JASPAR yes 118213056
chr1 840822 840828 MZF1 JASPAR yes 26171126
chr1 840822 840828 MZF1 JASPAR yes 118213057
chr1 840842 840854 HES5 JASPAR yes 26171127
chr1 840842 840854 HES7 JASPAR yes 26171128
chr1 840842 840854 HES5 JASPAR yes 118213058
chr1 840842 840854 HES7 JASPAR yes 118213059
chr1 840843 840853 HEY1 JASPAR yes 26171129
chr1 840843 840853 HEY2 JASPAR yes 26171130
chr1 840843 840853 HEY1 JASPAR yes 118213060
chr1 840843 840853 HEY2 JASPAR yes 118213061
chr1 840849 840860 TFAP2A JASPAR yes 26171131
chr1 840849 840860 TFAP2B JASPAR yes 26171132
chr1 840849 840860 TFAP2A JASPAR yes 118213062
chr1 840849 840860 TFAP2B JASPAR yes 118213063
chr1 840854 840862 E2F1 JASPAR yes 26171133
chr1 840854 840862 E2F1 JASPAR yes 118213064
chr1 840874 840880 SP1 TRANSFAC yes 26171134
chr1 840874 840880 SP1 TRANSFAC yes 118213065
chr1 840875 840880 SP1 TRANSFAC yes 26171135
chr1 840875 840880 SP1 TRANSFAC yes 118213066
chr1 840887 840899 NHLH1 JASPAR yes 26171136
chr1 840887 840899 NHLH1 JASPAR yes 118213067
chr1 840900 840915 TFAP2C JASPAR yes 26171137
chr1 840900 840915 TFAP2C JASPAR yes 118213068
chr1 840903 840914 TFAP2A JASPAR yes 26171138
chr1 840903 840914 TFAP2B JASPAR yes 26171139
chr1 840903 840914 TFAP2C JASPAR yes 26171140
chr1 840903 840914 TFAP2A JASPAR yes 118213069
chr1 840903 840914 TFAP2B JASPAR yes 118213070
chr1 840903 840914 TFAP2C JASPAR yes 118213071
chr1 840904 840913 TFAP2A JASPAR yes 26171141
chr1 840904 840913 TFAP2A JASPAR yes 118213072
chr1 840909 840914 SP1 TRANSFAC yes 26171142
chr1 840909 840914 SP1 TRANSFAC yes 118213073
chr1 840911 840928 ESR1 JASPAR yes 26171143
chr1 840911 840928 ESR1 JASPAR yes 118213074
chr1 840962 840972 RELA JASPAR yes 26171144
chr1 840962 840972 RELA JASPAR yes 118213075
chr1 840962 840973 FOXH1 JASPAR yes 26171145
chr1 840962 840973 FOXH1 JASPAR yes 118213076
chr1 840966 840972 ZNF354C JASPAR yes 26171146
chr1 840966 840972 ZNF354C JASPAR yes 118213077
chr1 840969 840984 FOXP1 JASPAR yes 26171147
chr1 840969 840984 FOXP1 JASPAR yes 118213078
chr1 840970 840984 GATA2 JASPAR yes 26171148
chr1 840970 840984 GATA2 JASPAR yes 118213079
chr1 840972 840980 GATA3 JASPAR yes 26171149
chr1 840972 840980 GATA3 JASPAR yes 118213080
chr1 840974 840989 FOXP1 JASPAR yes 26171150
chr1 840974 840989 FOXP1 JASPAR yes 118213081
chr1 840988 841007 RFX2 JASPAR yes 26171151
chr1 840988 841007 RFX2 JASPAR yes 118213082
chr1 840998 841013 ZBTB33 JASPAR yes 26171152
chr1 840998 841013 ZBTB33 JASPAR yes 118213083
chr1 841003 841014 E2F1 JASPAR yes 26171153
chr1 841003 841014 E2F1 JASPAR yes 118213084
chr1 841004 841015 E2F4 JASPAR yes 26171154
chr1 841004 841015 E2F6 JASPAR yes 26171155
chr1 841004 841015 E2F4 JASPAR yes 118213085
chr1 841004 841015 E2F6 JASPAR yes 118213086
chr1 841004 841019 ZIC3 JASPAR yes 26171156
chr1 841004 841019 ZIC3 JASPAR yes 118213087
chr1 841008 841014 MAZ TRANSFAC yes 26171157
chr1 841008 841014 MAZ TRANSFAC yes 118213088
chr1 841012 841026 PLAG1 JASPAR yes 26171158
chr1 841012 841026 PLAG1 JASPAR yes 118213089
chr1 841014 841018 LFA1 TRANSFAC yes 26171159
chr1 841014 841018 LFA1 TRANSFAC yes 118213090
chr1 841035 841038 MYB TRANSFAC yes 26171160
chr1 841035 841038 MYB TRANSFAC yes 118213091
chr1 841048 841061 TFAP2B JASPAR yes 26171161
chr1 841048 841061 TFAP2B JASPAR yes 118213092
chr1 841082 841092 RORA JASPAR yes 26171162
chr1 841082 841092 RORA JASPAR yes 118213093
chr1 841083 841094 ESRRA JASPAR yes 26171163
chr1 841083 841094 ESRRA JASPAR yes 118213094
chr1 841085 841094 RARB TRANSFAC yes 26171164
chr1 841085 841094 RARB TRANSFAC yes 118213095
chr1 841087 841091 ESR1 TRANSFAC yes 26171165
chr1 841087 841091 ESR1 TRANSFAC yes 118213096
chr1 841103 841117 TCF7L2 JASPAR yes 26171166
chr1 841103 841117 TCF7L2 JASPAR yes 118213097
chr1 841103 841118 LEF1 JASPAR yes 26171167
chr1 841103 841118 LEF1 JASPAR yes 118213098
chr1 841107 841113 TCF4 TRANSFAC yes 26171168
chr1 841107 841113 TCF4 TRANSFAC yes 118213099
chr1 841128 841143 FOXA1 JASPAR yes 26171169
chr1 841128 841143 FOXA1 JASPAR yes 118213100
chr1 841130 841139 SRY JASPAR yes 26171170
chr1 841130 841139 SRY JASPAR yes 118213101
chr1 841130 841142 FOXC2 JASPAR yes 26171171
chr1 841130 841142 FOXC2 JASPAR yes 118213102
chr1 841131 841142 FOXC1 JASPAR yes 26171172
chr1 841131 841142 FOXC1 JASPAR yes 118213103
chr1 841132 841143 FOXA1 JASPAR yes 26171173
chr1 841132 841143 FOXA1 JASPAR yes 118213104
chr1 841138 841152 BATF3 JASPAR yes 26171174
chr1 841138 841152 BATF3 JASPAR yes 118213105
chr1 841141 841144 MYB TRANSFAC yes 26171175
chr1 841141 841144 MYB TRANSFAC yes 118213106
chr1 841141 841152 PHOX2A JASPAR yes 26171176
chr1 841141 841152 PHOX2A JASPAR yes 118213107
chr1 841143 841148 ATF1 TRANSFAC yes 26171177
chr1 841143 841148 ATF1 TRANSFAC yes 118213108
chr1 841143 841153 POU6F2 JASPAR yes 26171178
chr1 841143 841153 POU6F2 JASPAR yes 118213109
chr1 841145 841153 NKX6-1 JASPAR yes 26171179
chr1 841145 841153 NKX6-1 JASPAR yes 118213110
chr1 841145 841155 HOXC10 JASPAR yes 26171180
chr1 841145 841155 HOXC10 JASPAR yes 118213111
chr1 841147 841151 YY1 TRANSFAC yes 26171181
chr1 841147 841151 YY1 TRANSFAC yes 118213112
chr1 841150 841161 PROP1 JASPAR yes 26171182
chr1 841150 841161 PROP1 JASPAR yes 118213113
chr1 841153 841159 TCF4 TRANSFAC yes 26171183
chr1 841153 841159 TCF4 TRANSFAC yes 118213114
chr1 841179 841197 RARA JASPAR yes 26171184
chr1 841179 841197 RARA JASPAR yes 118213115
chr1 841181 841195 RORA JASPAR yes 26171185
chr1 841181 841195 RORA JASPAR yes 118213116
chr1 841184 841194 RORA JASPAR yes 26171186
chr1 841184 841194 RORA JASPAR yes 118213117
chr1 841188 841203 ESR2 JASPAR yes 26171187
chr1 841188 841203 ESR2 JASPAR yes 118213118
chr1 841189 841193 ESR1 TRANSFAC yes 26171188
chr1 841189 841193 ESR1 TRANSFAC yes 118213119
SNP sites on vista2[chr1:840753-841210]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 840753 rs4970382 T C
POLR2A
734
chr1 841056 rs79276155 C T
TFAP2B
735
chr1 841085 rs1574243 C G
ESRRA RARB RORA
736
Genes possibly regulated by vista2[chr1:840753-841210]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 818043 819983 + AL645608.2 ENSG00000269308.1 818043 0.0 0.0 4 77290
chr1 860260 879955 + SAMD11 ENSG00000187634.6 860260 0.92 1.0 5 80950
chr1 861264 866445 - AL645608.1 ENSG00000268179.1 866445 1.0 1.0 6 74765
chr1 879584 894689 - NOC2L ENSG00000188976.6 894689 0.69 1.0 7 46521
chr1 895967 901095 + KLHL17 ENSG00000187961.9 895967 0.67 1.0 8 45243
chr1 901877 911245 + PLEKHN1 ENSG00000187583.6 901877 0.96 1.0 9 39333
chr1 910579 917497 - C1orf170 ENSG00000187642.5 917497 0.99 1.0 10 23713
chr1 934342 935552 - HES4 ENSG00000188290.6 935552 0.71 1.0 11 5658
Expression level of Genes
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miRNAs possibly regulated by vista2[chr1:840753-841210]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results