EnhancerDB
  1. Home
  2. Enhancers
  3. vista20[chr1:1063914-1064111]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20[chr1:1063914-1064111]
Back to top
Tissue distribution of vista20
Back to top
Transcription factor that possibly regulate vista20[chr1:1063914-1064111]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 1063942 1063957 HNF1A JASPAR yes 26181859
chr1 1063942 1063957 HNF1A JASPAR yes 118213964
chr1 1063943 1063956 HNF1B JASPAR yes 26181860
chr1 1063943 1063956 HNF1B JASPAR yes 118213965
chr1 1063957 1063967 NFIA JASPAR yes 26181861
chr1 1063957 1063967 NFIA JASPAR yes 118213966
chr1 1063959 1063965 NFIC JASPAR yes 26181862
chr1 1063959 1063965 NFIC JASPAR yes 118213967
chr1 1063962 1063972 TEAD4 JASPAR yes 26181863
chr1 1063962 1063972 TEAD4 JASPAR yes 118213968
chr1 1063962 1063974 TEAD1 JASPAR yes 26181864
chr1 1063962 1063974 TEAD1 JASPAR yes 118213969
chr1 1064005 1064016 E2F4 JASPAR yes 26181865
chr1 1064005 1064016 E2F4 JASPAR yes 118213970
chr1 1064011 1064030 CTCF JASPAR yes 26181866
chr1 1064011 1064030 CTCF JASPAR yes 118213971
chr1 1064017 1064023 ETS1 JASPAR yes 26181867
chr1 1064017 1064023 SPI1 JASPAR yes 26181868
chr1 1064017 1064023 ETS1 JASPAR yes 118213972
chr1 1064017 1064023 SPI1 JASPAR yes 118213973
chr1 1064021 1064034 TFAP2A JASPAR yes 26181869
chr1 1064021 1064034 TFAP2C JASPAR yes 26181870
chr1 1064021 1064034 TFAP2A JASPAR yes 118213974
chr1 1064021 1064034 TFAP2C JASPAR yes 118213975
chr1 1064029 1064033 LFA1 TRANSFAC yes 26181871
chr1 1064029 1064033 LFA1 TRANSFAC yes 118213976
chr1 1064033 1064047 GATA2 JASPAR yes 26181872
chr1 1064033 1064047 GATA2 JASPAR yes 118213977
chr1 1064035 1064043 GATA3 JASPAR yes 26181873
chr1 1064035 1064043 GATA5 JASPAR yes 26181874
chr1 1064035 1064043 GATA3 JASPAR yes 118213978
chr1 1064035 1064043 GATA5 JASPAR yes 118213979
chr1 1064053 1064062 TFAP2A JASPAR yes 26181875
chr1 1064053 1064062 TFAP2A JASPAR yes 118213980
chr1 1064057 1064068 NFKB1 JASPAR yes 26181876
chr1 1064057 1064068 NFKB1 JASPAR yes 118213981
chr1 1064068 1064088 ESR1 JASPAR yes 26181877
chr1 1064068 1064088 ESR1 JASPAR yes 118213982
chr1 1064071 1064089 ESR2 JASPAR yes 26181878
chr1 1064071 1064089 ESR2 JASPAR yes 118213983
chr1 1064072 1064084 GLI2 JASPAR yes 26181879
chr1 1064072 1064084 GLI2 JASPAR yes 118213984
chr1 1064079 1064098 CTCF JASPAR yes 26181880
chr1 1064079 1064098 CTCF JASPAR yes 118213985
chr1 1064082 1064097 NR2C2 JASPAR yes 26181881
chr1 1064082 1064097 NR2C2 JASPAR yes 118213986
chr1 1064092 1064107 RFX5 JASPAR yes 26181882
chr1 1064092 1064107 RFX5 JASPAR yes 118213987
chr1 1064107 1064128 ZNF263 JASPAR yes 26181883
chr1 1064107 1064128 ZNF263 JASPAR yes 118213988
SNP sites on vista20[chr1:1063914-1064111]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 1064016 rs113617563 G A
CTCF E2F4
3190
chr1 1064091 rs148306245 G A
CTCF NR2C2
3191
Genes possibly regulated by vista20[chr1:1063914-1064111]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 1006346 1009687 - RNF223 ENSG00000237330.2 1009687 0.97 1.0 14 45773
chr1 1017198 1051741 - C1orf159 ENSG00000131591.13 1051741 0.65 1.0 15 87827
chr1 1109264 1133315 + TTLL10 ENSG00000162571.9 1109264 0.93 1.0 16 54847
chr1 1138888 1142071 - TNFRSF18 ENSG00000186891.9 1142071 0.88 1.0 17 22040
chr1 1146706 1149518 - TNFRSF4 ENSG00000186827.6 1149518 0.86 1.0 18 14593
Expression level of Genes
Back to top
miRNAs possibly regulated by vista20[chr1:1063914-1064111]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results