EnhancerDB
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  3. vista20041[chr15:55487983-55488563]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20041[chr15:55487983-55488563]
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Tissue distribution of vista20041
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Transcription factor that possibly regulate vista20041[chr15:55487983-55488563]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 55487988 55488001 DUXA JASPAR yes 70527339
chr15 55487991 55488001 POU6F2 JASPAR yes 70527340
chr15 55487992 55488002 ALX3 JASPAR yes 70527341
chr15 55487992 55488002 EMX1 JASPAR yes 70527342
chr15 55487992 55488002 EMX2 JASPAR yes 70527343
chr15 55487992 55488002 ESX1 JASPAR yes 70527344
chr15 55487992 55488002 GSX1 JASPAR yes 70527345
chr15 55487992 55488002 GSX2 JASPAR yes 70527346
chr15 55487992 55488002 HOXB2 JASPAR yes 70527347
chr15 55487992 55488002 HOXB3 JASPAR yes 70527348
chr15 55487992 55488002 LBX2 JASPAR yes 70527349
chr15 55487992 55488002 LHX2 JASPAR yes 70527350
chr15 55487992 55488002 LHX6 JASPAR yes 70527351
chr15 55487992 55488002 MEOX2 JASPAR yes 70527352
chr15 55487992 55488002 MIXL1 JASPAR yes 70527353
chr15 55487992 55488002 MNX1 JASPAR yes 70527354
chr15 55487992 55488002 NOTO JASPAR yes 70527355
chr15 55487992 55488002 POU6F1 JASPAR yes 70527356
chr15 55487992 55488002 RAX JASPAR yes 70527357
chr15 55487993 55488001 BSX JASPAR yes 70527358
chr15 55487993 55488001 DLX6 JASPAR yes 70527359
chr15 55487993 55488001 EN1 JASPAR yes 70527360
chr15 55487993 55488001 ISX JASPAR yes 70527361
chr15 55487993 55488001 LBX1 JASPAR yes 70527362
chr15 55487993 55488001 LHX9 JASPAR yes 70527363
chr15 55487993 55488001 LMX1A JASPAR yes 70527364
chr15 55487993 55488001 LMX1B JASPAR yes 70527365
chr15 55487993 55488001 NKX6-1 JASPAR yes 70527366
chr15 55487993 55488001 NKX6-2 JASPAR yes 70527367
chr15 55487993 55488001 PAX4 JASPAR yes 70527368
chr15 55487993 55488001 PDX1 JASPAR yes 70527369
chr15 55487993 55488001 PRRX1 JASPAR yes 70527370
chr15 55487993 55488001 RAX2 JASPAR yes 70527371
chr15 55487993 55488001 SHOX JASPAR yes 70527372
chr15 55487993 55488001 UNCX JASPAR yes 70527373
chr15 55487993 55488001 VAX1 JASPAR yes 70527374
chr15 55487993 55488001 VAX2 JASPAR yes 70527375
chr15 55487993 55488001 VSX1 JASPAR yes 70527376
chr15 55487993 55488001 VSX2 JASPAR yes 70527377
chr15 55487994 55488004 PAX7 JASPAR yes 70527378
chr15 55487996 55488006 GSX1 JASPAR yes 70527379
chr15 55487996 55488006 GSX2 JASPAR yes 70527380
chr15 55487996 55488010 RORA JASPAR yes 70527381
chr15 55487996 55488011 JUND JASPAR yes 70527382
chr15 55487997 55488005 NKX6-1 JASPAR yes 70527383
chr15 55487997 55488005 NKX6-2 JASPAR yes 70527384
chr15 55487997 55488007 POU6F2 JASPAR yes 70527385
chr15 55487997 55488010 JUN JASPAR yes 70527386
chr15 55487999 55488009 RORA JASPAR yes 70527387
chr15 55488001 55488009 CREB1 JASPAR yes 70527388
chr15 55488004 55488008 ESR1 TRANSFAC yes 70527389
chr15 55488009 55488024 LEF1 JASPAR yes 70527390
chr15 55488010 55488024 TCF7L2 JASPAR yes 70527391
chr15 55488013 55488019 LEF1 TRANSFAC yes 70527392
chr15 55488013 55488019 TCF4 TRANSFAC yes 70527393
chr15 55488032 55488036 TEAD2 TRANSFAC yes 70527394
chr15 55488035 55488053 RARA JASPAR yes 70527395
chr15 55488054 55488064 MEOX2 JASPAR yes 70527396
chr15 55488060 55488064 YY1 TRANSFAC yes 70527397
chr15 55488068 55488073 ATF1 TRANSFAC yes 70527398
chr15 55488098 55488119 ZNF263 JASPAR yes 70527399
chr15 55488106 55488116 MZF1 JASPAR yes 70527400
chr15 55488109 55488115 SP1 TRANSFAC yes 70527401
chr15 55488109 55488119 SP1 JASPAR yes 70527402
chr15 55488164 55488169 SP1 TRANSFAC yes 70527403
chr15 55488169 55488177 HOXA5 JASPAR yes 70527404
chr15 55488200 55488211 STAT1 JASPAR yes 70527405
chr15 55488200 55488211 STAT3 JASPAR yes 70527406
chr15 55488232 55488239 SPIB JASPAR yes 70527407
chr15 55488255 55488263 MEIS2 JASPAR yes 70527408
chr15 55488255 55488263 MEIS3 JASPAR yes 70527409
chr15 55488281 55488293 PROX1 JASPAR yes 70527410
chr15 55488288 55488299 CEBPB JASPAR yes 70527411
chr15 55488289 55488300 CEBPA JASPAR yes 70527412
chr15 55488290 55488301 TBX20 JASPAR yes 70527413
chr15 55488305 55488317 FOXI1 JASPAR yes 70527414
chr15 55488306 55488320 ONECUT3 JASPAR yes 70527415
chr15 55488306 55488322 POU4F2 JASPAR yes 70527416
chr15 55488306 55488322 POU4F3 JASPAR yes 70527417
chr15 55488308 55488312 YY1 TRANSFAC yes 70527418
chr15 55488308 55488322 POU4F1 JASPAR yes 70527419
chr15 55488309 55488320 CDX2 JASPAR yes 70527420
chr15 55488309 55488322 HNF1B JASPAR yes 70527421
chr15 55488313 55488325 FOXC2 JASPAR yes 70527422
chr15 55488313 55488327 FOXF2 JASPAR yes 70527423
chr15 55488314 55488325 FOXB1 JASPAR yes 70527424
chr15 55488314 55488325 FOXC1 JASPAR yes 70527425
chr15 55488315 55488319 YY1 TRANSFAC yes 70527426
chr15 55488351 55488356 SP1 TRANSFAC yes 70527427
chr15 55488352 55488363 TFAP2A JASPAR yes 70527428
chr15 55488352 55488363 TFAP2B JASPAR yes 70527429
chr15 55488352 55488363 TFAP2C JASPAR yes 70527430
chr15 55488360 55488378 MAFF JASPAR yes 70527431
chr15 55488361 55488376 MAFK JASPAR yes 70527432
chr15 55488363 55488367 NFE TRANSFAC yes 70527433
chr15 55488370 55488374 YY1 TRANSFAC yes 70527434
chr15 55488384 55488395 FLI1 JASPAR yes 70527435
chr15 55488385 55488395 ETV6 JASPAR yes 70527436
chr15 55488385 55488398 ELF1 JASPAR yes 70527437
chr15 55488386 55488393 SPI1 JASPAR yes 70527438
chr15 55488386 55488394 EHF JASPAR yes 70527439
chr15 55488403 55488407 YY1 TRANSFAC yes 70527440
chr15 55488433 55488447 IRF7 JASPAR yes 70527441
chr15 55488442 55488447 ETS2 TRANSFAC yes 70527442
chr15 55488447 55488456 NKX3-2 JASPAR yes 70527443
chr15 55488461 55488467 SP1 TRANSFAC yes 70527444
chr15 55488472 55488484 E2F8 JASPAR yes 70527445
chr15 55488473 55488479 ETS1 JASPAR yes 70527446
chr15 55488473 55488479 SPI1 JASPAR yes 70527447
chr15 55488492 55488506 FOXF2 JASPAR yes 70527448
chr15 55488493 55488513 PPARG JASPAR yes 70527449
chr15 55488494 55488505 FOXB1 JASPAR yes 70527450
chr15 55488494 55488505 FOXC1 JASPAR yes 70527451
chr15 55488495 55488507 FOXI1 JASPAR yes 70527452
chr15 55488509 55488524 MAFK JASPAR yes 70527453
chr15 55488522 55488528 ETS1 JASPAR yes 70527454
chr15 55488524 55488542 NR3C1 JASPAR yes 70527455
chr15 55488534 55488544 SP1 JASPAR yes 70527456
chr15 55488538 55488544 MZF1 JASPAR yes 70527457
chr15 55488539 55488559 RREB1 JASPAR yes 70527458
chr15 55488544 55488553 ZEB1 JASPAR yes 70527459
chr15 55488547 55488552 USF2 TRANSFAC yes 70527460
chr15 55488556 55488559 MYB TRANSFAC yes 70527461
SNP sites on vista20041[chr15:55487983-55488563]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 55488013 rs150977385 T A
LEF1 TCF4 TCF7L2
3967182
chr15 55488083 rs74735289 T C no 3967183
chr15 55488141 rs182759509 C G no 3967184
chr15 55488234 rs73407850 G C
SPIB
3967185
chr15 55488305 rs55849150 C T
FOXI1
3967186
chr15 55488336 rs187486215 T C no 3967187
chr15 55488469 rs545678126 G T no 3967188
Genes possibly regulated by vista20041[chr15:55487983-55488563]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 55473004 55489265 - RSL24D1 ENSG00000137876.5 55489265 0.64 0.98 13956 99298
Expression level of Genes
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miRNAs possibly regulated by vista20041[chr15:55487983-55488563]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results