EnhancerDB
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  3. vista20045[chr15:55543162-55543346]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20045[chr15:55543162-55543346]
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Tissue distribution of vista20045
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Transcription factor that possibly regulate vista20045[chr15:55543162-55543346]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 55543152 55543163 ESRRA JASPAR yes 23496115
chr15 55543152 55543163 ESRRB JASPAR yes 23496116
chr15 55543152 55543163 ESRRA JASPAR yes 70527613
chr15 55543152 55543163 ESRRB JASPAR yes 70527614
chr15 55543154 55543162 NR4A2 JASPAR yes 23496117
chr15 55543154 55543162 NR4A2 JASPAR yes 70527615
chr15 55543169 55543174 SP1 TRANSFAC yes 23496119
chr15 55543169 55543174 SP1 TRANSFAC yes 70527616
chr15 55543175 55543193 SRF JASPAR yes 23496120
chr15 55543175 55543193 SRF JASPAR yes 70527617
chr15 55543214 55543218 YY1 TRANSFAC yes 23496121
chr15 55543214 55543218 YY1 TRANSFAC yes 70527618
chr15 55543266 55543279 POU2F2 JASPAR yes 23496122
chr15 55543266 55543279 POU2F2 JASPAR yes 70527619
chr15 55543266 55543280 POU1F1 JASPAR yes 23496123
chr15 55543266 55543280 POU1F1 JASPAR yes 70527620
chr15 55543268 55543272 YY1 TRANSFAC yes 23496124
chr15 55543268 55543272 YY1 TRANSFAC yes 70527621
chr15 55543274 55543286 IRF1 JASPAR yes 23496125
chr15 55543274 55543286 IRF1 JASPAR yes 70527622
chr15 55543281 55543287 SOX10 JASPAR yes 23496126
chr15 55543281 55543287 SOX10 JASPAR yes 70527623
chr15 55543293 55543304 FLI1 JASPAR yes 23496127
chr15 55543293 55543304 FLI1 JASPAR yes 70527624
chr15 55543294 55543304 ETV6 JASPAR yes 23496128
chr15 55543294 55543304 GABPA JASPAR yes 23496129
chr15 55543294 55543304 ETV6 JASPAR yes 70527625
chr15 55543294 55543304 GABPA JASPAR yes 70527626
chr15 55543294 55543307 ELF1 JASPAR yes 23496130
chr15 55543294 55543307 ELF1 JASPAR yes 70527627
chr15 55543295 55543302 SPI1 JASPAR yes 23496131
chr15 55543295 55543302 SPI1 JASPAR yes 70527628
chr15 55543295 55543303 EHF JASPAR yes 23496132
chr15 55543295 55543303 EHF JASPAR yes 70527629
chr15 55543297 55543304 SPIB JASPAR yes 23496133
chr15 55543297 55543304 SPIB JASPAR yes 70527630
chr15 55543309 55543312 MYB TRANSFAC yes 23496134
chr15 55543309 55543312 MYB TRANSFAC yes 70527631
chr15 55543311 55543321 NKX2-3 JASPAR yes 23496135
chr15 55543311 55543321 NKX2-3 JASPAR yes 70527632
chr15 55543312 55543321 NKX2-8 JASPAR yes 23496136
chr15 55543312 55543321 NKX2-8 JASPAR yes 70527633
chr15 55543318 55543323 MYC TRANSFAC yes 23496137
chr15 55543318 55543323 MYC TRANSFAC yes 70527634
chr15 55543321 55543328 MEIS1 JASPAR yes 23496138
chr15 55543321 55543328 MEIS1 JASPAR yes 70527635
chr15 55543321 55543329 MEIS2 JASPAR yes 23496139
chr15 55543321 55543329 MEIS3 JASPAR yes 23496140
chr15 55543321 55543329 MEIS2 JASPAR yes 70527636
chr15 55543321 55543329 MEIS3 JASPAR yes 70527637
chr15 55543330 55543334 YY1 TRANSFAC yes 23496141
chr15 55543330 55543334 YY1 TRANSFAC yes 70527638
SNP sites on vista20045[chr15:55543162-55543346]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 55543216 rs116487395 A G,T
YY1
3967506
chr15 55543271 rs552020668 T A,C
POU1F1 POU2F2 YY1
3967507
chr15 55543303 rs370212915 C G
EHF ELF1 ETV6 FLI1 GABPA SPIB
3967508
Genes possibly regulated by vista20045[chr15:55543162-55543346]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 55473004 55489265 - RSL24D1 ENSG00000137876.5 55489265 0.64 0.98 13956 46103
chr15 55495164 55611311 - RAB27A ENSG00000069974.11 55611311 0.78 0.94 13957 32035
chr15 55611158 55647846 + PIGB ENSG00000069943.5 55611158 0.66 1.0 13958 32188
Expression level of Genes
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miRNAs possibly regulated by vista20045[chr15:55543162-55543346]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results