EnhancerDB
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  3. vista20047[chr15:55559739-55560363]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20047[chr15:55559739-55560363]
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Tissue distribution of vista20047
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Transcription factor that possibly regulate vista20047[chr15:55559739-55560363]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 55559743 55559764 MAFG JASPAR yes 23497667
chr15 55559743 55559764 MAFG JASPAR yes 70527655
chr15 55559758 55559772 FOXF2 JASPAR yes 23497668
chr15 55559758 55559772 FOXF2 JASPAR yes 70527656
chr15 55559759 55559772 HNF1B JASPAR yes 23497669
chr15 55559759 55559772 HNF1B JASPAR yes 70527657
chr15 55559759 55559773 POU4F1 JASPAR yes 23497670
chr15 55559759 55559773 POU4F1 JASPAR yes 70527658
chr15 55559760 55559772 FOXC2 JASPAR yes 23497671
chr15 55559760 55559772 FOXC2 JASPAR yes 70527659
chr15 55559781 55559791 EVX1 JASPAR yes 23497672
chr15 55559781 55559791 EVX1 JASPAR yes 70527660
chr15 55559784 55559802 IRF2 JASPAR yes 23497673
chr15 55559784 55559802 IRF2 JASPAR yes 70527661
chr15 55559785 55559806 IRF1 JASPAR yes 23497674
chr15 55559785 55559806 IRF1 JASPAR yes 70527662
chr15 55559786 55559799 SCRT2 JASPAR yes 23497675
chr15 55559786 55559799 SCRT2 JASPAR yes 70527663
chr15 55559789 55559801 IRF1 JASPAR yes 23497676
chr15 55559789 55559801 IRF1 JASPAR yes 70527664
chr15 55559789 55559804 IRF9 JASPAR yes 23497677
chr15 55559789 55559804 IRF9 JASPAR yes 70527665
chr15 55559797 55559807 HOXB13 JASPAR yes 23497678
chr15 55559797 55559807 HOXD13 JASPAR yes 23497679
chr15 55559797 55559807 HOXB13 JASPAR yes 70527666
chr15 55559797 55559807 HOXD13 JASPAR yes 70527667
chr15 55559798 55559808 GSX2 JASPAR yes 23497680
chr15 55559798 55559808 GSX2 JASPAR yes 70527668
chr15 55559799 55559807 BSX JASPAR yes 23497681
chr15 55559799 55559807 BSX JASPAR yes 70527669
chr15 55559808 55559822 JUN JASPAR yes 23497682
chr15 55559808 55559822 JUN JASPAR yes 70527670
chr15 55559811 55559822 FOSL2 JASPAR yes 23497683
chr15 55559811 55559822 JUNB JASPAR yes 23497684
chr15 55559811 55559822 FOSL2 JASPAR yes 70527671
chr15 55559811 55559822 JUNB JASPAR yes 70527672
chr15 55559812 55559823 FOS JASPAR yes 23497685
chr15 55559812 55559823 FOSL1 JASPAR yes 23497686
chr15 55559812 55559823 JUND JASPAR yes 23497687
chr15 55559812 55559823 NFE2 JASPAR yes 23497688
chr15 55559812 55559823 FOS JASPAR yes 70527673
chr15 55559812 55559823 FOSL1 JASPAR yes 70527674
chr15 55559812 55559823 JUND JASPAR yes 70527675
chr15 55559812 55559823 NFE2 JASPAR yes 70527676
chr15 55559812 55559830 MAFF JASPAR yes 23497689
chr15 55559812 55559830 MAFF JASPAR yes 70527677
chr15 55559813 55559822 JDP2 JASPAR yes 23497690
chr15 55559813 55559822 JDP2 JASPAR yes 70527678
chr15 55559813 55559824 FOSL2 JASPAR yes 23497691
chr15 55559813 55559824 JUNB JASPAR yes 23497692
chr15 55559813 55559824 FOSL2 JASPAR yes 70527679
chr15 55559813 55559824 JUNB JASPAR yes 70527680
chr15 55559813 55559827 JUN JASPAR yes 23497693
chr15 55559813 55559827 JUN JASPAR yes 70527681
chr15 55559814 55559825 BATF JASPAR yes 23497694
chr15 55559814 55559825 BATF JASPAR yes 70527682
chr15 55559825 55559829 NFE TRANSFAC yes 23497695
chr15 55559825 55559829 NFE TRANSFAC yes 70527683
chr15 55559867 55559881 TCF7L2 JASPAR yes 23497696
chr15 55559867 55559881 TCF7L2 JASPAR yes 70527684
chr15 55559867 55559882 LEF1 JASPAR yes 23497697
chr15 55559867 55559882 NR2C2 JASPAR yes 23497698
chr15 55559867 55559882 LEF1 JASPAR yes 70527685
chr15 55559867 55559882 NR2C2 JASPAR yes 70527686
chr15 55559868 55559882 RXRB JASPAR yes 23497699
chr15 55559868 55559882 RXRB JASPAR yes 70527687
chr15 55559871 55559877 TCF1 TRANSFAC yes 23497700
chr15 55559871 55559877 TCF1 TRANSFAC yes 70527688
chr15 55559878 55559892 TCF7L2 JASPAR yes 23497701
chr15 55559878 55559892 TCF7L2 JASPAR yes 70527689
chr15 55559878 55559893 LEF1 JASPAR yes 23497702
chr15 55559878 55559893 LEF1 JASPAR yes 70527690
chr15 55559886 55559891 ETS2 TRANSFAC yes 23497703
chr15 55559886 55559891 ETS2 TRANSFAC yes 70527691
chr15 55559918 55559930 PROX1 JASPAR yes 23497704
chr15 55559918 55559930 PROX1 JASPAR yes 70527692
chr15 55559926 55559935 PITX3 JASPAR yes 23497705
chr15 55559926 55559935 PITX3 JASPAR yes 70527693
chr15 55559926 55559936 GSC2 JASPAR yes 23497706
chr15 55559926 55559936 GSC2 JASPAR yes 70527694
chr15 55559927 55559935 OTX1 JASPAR yes 23497707
chr15 55559927 55559935 OTX2 JASPAR yes 23497708
chr15 55559927 55559935 OTX1 JASPAR yes 70527695
chr15 55559927 55559935 OTX2 JASPAR yes 70527696
chr15 55559937 55559952 FOXP1 JASPAR yes 23497709
chr15 55559937 55559952 FOXP1 JASPAR yes 70527697
chr15 55559938 55559959 IRF1 JASPAR yes 23497710
chr15 55559938 55559959 IRF1 JASPAR yes 70527698
chr15 55559948 55559954 HiNF-A TRANSFAC yes 23497711
chr15 55559948 55559954 HiNF-A TRANSFAC yes 70527699
chr15 55559955 55559968 ELF1 JASPAR yes 23497712
chr15 55559955 55559968 ELF1 JASPAR yes 70527700
chr15 55559958 55559969 FLI1 JASPAR yes 23497713
chr15 55559958 55559969 FLI1 JASPAR yes 70527701
chr15 55559963 55559983 PPARG JASPAR yes 23497714
chr15 55559963 55559983 PPARG JASPAR yes 70527702
chr15 55560001 55560005 H4TF2 TRANSFAC yes 23497715
chr15 55560001 55560005 H4TF2 TRANSFAC yes 70527703
chr15 55560010 55560016 SP1 TRANSFAC yes 23497716
chr15 55560010 55560016 SP1 TRANSFAC yes 70527704
chr15 55560011 55560016 SP1 TRANSFAC yes 23497717
chr15 55560011 55560016 SP1 TRANSFAC yes 70527705
chr15 55560012 55560023 ELK4 JASPAR yes 23497718
chr15 55560012 55560023 ELK4 JASPAR yes 70527706
chr15 55560014 55560020 ETS1 JASPAR yes 23497719
chr15 55560014 55560020 SPI1 JASPAR yes 23497720
chr15 55560014 55560020 ETS1 JASPAR yes 70527707
chr15 55560014 55560020 SPI1 JASPAR yes 70527708
chr15 55560015 55560029 STAT1 JASPAR yes 23497721
chr15 55560015 55560029 STAT1 JASPAR yes 70527709
chr15 55560015 55560030 STAT2 JASPAR yes 23497722
chr15 55560015 55560030 STAT2 JASPAR yes 70527710
chr15 55560025 55560044 REST JASPAR yes 23497723
chr15 55560025 55560044 REST JASPAR yes 70527711
chr15 55560044 55560063 RFX2 JASPAR yes 23497724
chr15 55560044 55560063 RFX2 JASPAR yes 70527712
chr15 55560046 55560061 RFX5 JASPAR yes 23497725
chr15 55560046 55560061 RFX5 JASPAR yes 70527713
chr15 55560051 55560066 JUND JASPAR yes 23497726
chr15 55560051 55560066 JUND JASPAR yes 70527714
chr15 55560052 55560065 JUN JASPAR yes 23497727
chr15 55560052 55560065 JUN JASPAR yes 70527715
chr15 55560053 55560067 ATF7 JASPAR yes 23497728
chr15 55560053 55560067 ATF7 JASPAR yes 70527716
chr15 55560054 55560066 HLF JASPAR yes 23497729
chr15 55560054 55560066 JDP2 JASPAR yes 23497730
chr15 55560054 55560066 HLF JASPAR yes 70527717
chr15 55560054 55560066 JDP2 JASPAR yes 70527718
chr15 55560056 55560064 CREB1 JASPAR yes 23497731
chr15 55560056 55560064 CREB1 JASPAR yes 70527719
chr15 55560057 55560069 YY1 JASPAR yes 23497732
chr15 55560057 55560069 YY1 JASPAR yes 70527720
chr15 55560060 55560066 YY1 JASPAR yes 23497733
chr15 55560060 55560066 YY1 JASPAR yes 70527721
chr15 55560080 55560085 H4TF1 TRANSFAC yes 23497734
chr15 55560080 55560085 H4TF1 TRANSFAC yes 70527722
chr15 55560081 55560092 CEBPA JASPAR yes 23497735
chr15 55560081 55560092 CEBPA JASPAR yes 70527723
chr15 55560115 55560119 NFE TRANSFAC yes 23497736
chr15 55560115 55560119 NFE TRANSFAC yes 70527724
chr15 55560121 55560130 THAP1 JASPAR yes 23497737
chr15 55560121 55560130 THAP1 JASPAR yes 70527725
chr15 55560124 55560128 LFA1 TRANSFAC yes 23497738
chr15 55560124 55560128 LFA1 TRANSFAC yes 70527726
chr15 55560150 55560162 YY1 JASPAR yes 23497739
chr15 55560150 55560162 YY1 JASPAR yes 70527727
chr15 55560156 55560168 FOXI1 JASPAR yes 23497740
chr15 55560156 55560168 FOXI1 JASPAR yes 70527728
chr15 55560157 55560169 FOXC2 JASPAR yes 23497741
chr15 55560157 55560169 FOXC2 JASPAR yes 70527729
chr15 55560177 55560188 NFE2L2 JASPAR yes 23497742
chr15 55560177 55560188 NFE2L2 JASPAR yes 70527730
chr15 55560182 55560186 ESR1 TRANSFAC yes 23497743
chr15 55560182 55560186 ESR1 TRANSFAC yes 70527731
chr15 55560198 55560208 HMBOX1 JASPAR yes 23497744
chr15 55560198 55560208 HMBOX1 JASPAR yes 70527732
chr15 55560200 55560203 MYB TRANSFAC yes 23497745
chr15 55560200 55560203 MYB TRANSFAC yes 70527733
chr15 55560204 55560208 YY1 TRANSFAC yes 23497746
chr15 55560204 55560208 YY1 TRANSFAC yes 70527734
chr15 55560206 55560219 SCRT2 JASPAR yes 23497747
chr15 55560206 55560219 SCRT2 JASPAR yes 70527735
chr15 55560206 55560221 SCRT1 JASPAR yes 23497748
chr15 55560206 55560221 SCRT1 JASPAR yes 70527736
chr15 55560218 55560233 PRDM1 JASPAR yes 23497749
chr15 55560218 55560233 PRDM1 JASPAR yes 70527737
chr15 55560219 55560240 ZNF263 JASPAR yes 23497750
chr15 55560219 55560240 ZNF263 JASPAR yes 70527738
chr15 55560256 55560266 GCM2 JASPAR yes 23497751
chr15 55560256 55560266 GCM2 JASPAR yes 70527739
chr15 55560271 55560283 TEAD1 JASPAR yes 23497752
chr15 55560271 55560283 TEAD1 JASPAR yes 70527740
chr15 55560273 55560283 TEAD1 JASPAR yes 23497753
chr15 55560273 55560283 TEAD4 JASPAR yes 23497754
chr15 55560273 55560283 TEAD1 JASPAR yes 70527741
chr15 55560273 55560283 TEAD4 JASPAR yes 70527742
chr15 55560274 55560282 TEAD3 JASPAR yes 23497755
chr15 55560274 55560282 TEAD3 JASPAR yes 70527743
chr15 55560304 55560309 GATA2 JASPAR yes 23497756
chr15 55560304 55560309 GATA2 JASPAR yes 70527744
chr15 55560318 55560332 FOXF2 JASPAR yes 23497757
chr15 55560318 55560332 FOXF2 JASPAR yes 70527745
chr15 55560318 55560333 FOXP1 JASPAR yes 23497758
chr15 55560318 55560333 FOXP1 JASPAR yes 70527746
chr15 55560319 55560330 FOXA1 JASPAR yes 23497759
chr15 55560319 55560330 FOXH1 JASPAR yes 23497760
chr15 55560319 55560330 FOXA1 JASPAR yes 70527747
chr15 55560319 55560330 FOXH1 JASPAR yes 70527748
chr15 55560320 55560332 FOXC2 JASPAR yes 23497761
chr15 55560320 55560332 FOXC2 JASPAR yes 70527749
chr15 55560321 55560332 FOXP2 JASPAR yes 23497762
chr15 55560321 55560332 FOXP2 JASPAR yes 70527750
chr15 55560323 55560331 FOXG1 JASPAR yes 23497763
chr15 55560323 55560331 FOXG1 JASPAR yes 70527751
chr15 55560334 55560340 MZF1 JASPAR yes 23497764
chr15 55560334 55560340 MZF1 JASPAR yes 70527752
chr15 55560339 55560351 TAL1 JASPAR yes 23497765
chr15 55560339 55560351 TAL1 JASPAR yes 70527753
chr15 55560341 55560362 IRF1 JASPAR yes 23497766
chr15 55560341 55560362 IRF1 JASPAR yes 70527754
chr15 55560344 55560359 FOXP1 JASPAR yes 23497767
chr15 55560344 55560359 FOXP1 JASPAR yes 70527755
chr15 55560346 55560361 FOXP1 JASPAR yes 23497768
chr15 55560346 55560361 FOXP1 JASPAR yes 70527756
chr15 55560347 55560362 FOXP1 JASPAR yes 23497769
chr15 55560347 55560362 FOXP1 JASPAR yes 70527757
chr15 55560348 55560363 FOXP1 JASPAR yes 23497770
chr15 55560348 55560363 FOXP1 JASPAR yes 70527758
chr15 55560351 55560366 MEF2C JASPAR yes 23497771
chr15 55560351 55560366 MEF2C JASPAR yes 70527759
chr15 55560361 55560373 MEF2B JASPAR yes 23497772
chr15 55560361 55560373 MEF2D JASPAR yes 23497773
chr15 55560361 55560373 MEF2B JASPAR yes 70527760
chr15 55560361 55560373 MEF2D JASPAR yes 70527761
chr15 55560363 55560367 YY1 TRANSFAC yes 23497774
chr15 55560363 55560367 YY1 TRANSFAC yes 70527762
SNP sites on vista20047[chr15:55559739-55560363]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 55559868 rs61409017 C T
LEF1 NR2C2 RXRB TCF7L2
3967664
chr15 55559998 rs146925709 C A,T no 3967665
chr15 55560029 rs147571766 G A
REST STAT1 STAT2
3967666
chr15 55560040 rs187980993 A G
REST
3967667
chr15 55560060 rs554819920 C T
ATF7 CREB1 HLF JDP2 JUN JUND RFX2 RFX5 YY1
3967668
chr15 55560258 rs145895063 A G
GCM2
3967669
Genes possibly regulated by vista20047[chr15:55559739-55560363]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 55473004 55489265 - RSL24D1 ENSG00000137876.5 55489265 0.64 0.98 13956 29526
chr15 55495164 55611311 - RAB27A ENSG00000069974.11 55611311 0.78 0.94 13957 49052
chr15 55611158 55647846 + PIGB ENSG00000069943.5 55611158 0.66 1.0 13958 49205
Expression level of Genes
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miRNAs possibly regulated by vista20047[chr15:55559739-55560363]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results