EnhancerDB
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  3. vista20048[chr15:55571935-55572134]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20048[chr15:55571935-55572134]
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Tissue distribution of vista20048
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Transcription factor that possibly regulate vista20048[chr15:55571935-55572134]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 55571810 55572327 TCF7L2 UCSC Txn Factor no Conserved 108139794
chr15 55571851 55572440 EP300 UCSC Txn Factor no Conserved 108139801
chr15 55571852 55572220 JUN UCSC Txn Factor no Conserved 108139802
chr15 55571871 55572192 JUND UCSC Txn Factor no Conserved 108139806
chr15 55571889 55572132 TAL1 UCSC Txn Factor no Conserved 108139809
chr15 55571909 55572181 NR2F2 UCSC Txn Factor no Conserved 108139820
chr15 55571911 55572116 TEAD4 UCSC Txn Factor no Conserved 108139823
chr15 55571920 55572499 ATF2 UCSC Txn Factor no Conserved 108139827
chr15 55571933 55572189 FOS UCSC Txn Factor no Conserved 108139830
chr15 55571940 55572444 RUNX3 UCSC Txn Factor no Conserved 108139840
chr15 55571964 55572138 FOSL1 UCSC Txn Factor no Conserved 108139849
chr15 55571925 55571937 TEAD1 JASPAR yes 23498810
chr15 55571925 55571937 TEAD1 JASPAR yes 70527763
chr15 55571945 55571954 SOX9 JASPAR yes 23498811
chr15 55571945 55571954 SOX9 JASPAR yes 70527764
chr15 55571967 55571974 USF2 TRANSFAC yes 23498812
chr15 55571967 55571974 USF2 TRANSFAC yes 70527765
chr15 55571967 55571977 SREBF2 JASPAR yes 23498813
chr15 55571967 55571977 SREBF2 JASPAR yes 70527766
chr15 55571969 55571974 USF2 TRANSFAC yes 23498814
chr15 55571969 55571974 USF2 TRANSFAC yes 70527767
chr15 55571970 55571976 PTF TRANSFAC yes 23498815
chr15 55571970 55571976 PTF TRANSFAC yes 70527768
chr15 55571978 55571989 FOXB1 JASPAR yes 23498816
chr15 55571978 55571989 FOXC1 JASPAR yes 23498817
chr15 55571978 55571989 FOXB1 JASPAR yes 70527769
chr15 55571978 55571989 FOXC1 JASPAR yes 70527770
chr15 55571979 55571991 FOXI1 JASPAR yes 23498818
chr15 55571979 55571991 FOXI1 JASPAR yes 70527771
chr15 55571993 55571998 ETS2 TRANSFAC yes 23498819
chr15 55571993 55571998 ETS2 TRANSFAC yes 70527772
chr15 55571999 55572011 TAL1 JASPAR yes 23498820
chr15 55571999 55572011 TAL1 JASPAR yes 70527773
chr15 55572003 55572009 YY1 JASPAR yes 23498821
chr15 55572003 55572009 YY1 JASPAR yes 70527774
chr15 55572028 55572049 MAFG JASPAR yes 23498822
chr15 55572028 55572049 MAFG JASPAR yes 70527775
chr15 55572029 55572043 JUN JASPAR yes 23498823
chr15 55572029 55572043 JUN JASPAR yes 70527776
chr15 55572030 55572040 EMX1 JASPAR yes 23498824
chr15 55572030 55572040 HOXB2 JASPAR yes 23498825
chr15 55572030 55572040 HOXB3 JASPAR yes 23498826
chr15 55572030 55572040 MEOX1 JASPAR yes 23498827
chr15 55572030 55572040 MEOX2 JASPAR yes 23498828
chr15 55572030 55572040 EMX1 JASPAR yes 70527777
chr15 55572030 55572040 HOXB2 JASPAR yes 70527778
chr15 55572030 55572040 HOXB3 JASPAR yes 70527779
chr15 55572030 55572040 MEOX1 JASPAR yes 70527780
chr15 55572030 55572040 MEOX2 JASPAR yes 70527781
chr15 55572030 55572043 HNF1B JASPAR yes 23498829
chr15 55572030 55572043 HNF1B JASPAR yes 70527782
chr15 55572031 55572039 NKX6-1 JASPAR yes 23498830
chr15 55572031 55572039 NKX6-1 JASPAR yes 70527783
chr15 55572031 55572042 BATF JASPAR yes 23498831
chr15 55572031 55572042 BATF JASPAR yes 70527784
chr15 55572032 55572043 FOSL2 JASPAR yes 23498832
chr15 55572032 55572043 JUNB JASPAR yes 23498833
chr15 55572032 55572043 FOSL2 JASPAR yes 70527785
chr15 55572032 55572043 JUNB JASPAR yes 70527786
chr15 55572033 55572044 FOS JASPAR yes 23498834
chr15 55572033 55572044 FOSL1 JASPAR yes 23498835
chr15 55572033 55572044 JUND JASPAR yes 23498836
chr15 55572033 55572044 NFE2 JASPAR yes 23498837
chr15 55572033 55572044 FOS JASPAR yes 70527787
chr15 55572033 55572044 FOSL1 JASPAR yes 70527788
chr15 55572033 55572044 JUND JASPAR yes 70527789
chr15 55572033 55572044 NFE2 JASPAR yes 70527790
chr15 55572033 55572051 MAFF JASPAR yes 23498838
chr15 55572033 55572051 MAFF JASPAR yes 70527791
chr15 55572034 55572043 JDP2 JASPAR yes 23498839
chr15 55572034 55572043 JDP2 JASPAR yes 70527792
chr15 55572034 55572045 FOSL2 JASPAR yes 23498840
chr15 55572034 55572045 JUNB JASPAR yes 23498841
chr15 55572034 55572045 FOSL2 JASPAR yes 70527793
chr15 55572034 55572045 JUNB JASPAR yes 70527794
chr15 55572034 55572048 JUN JASPAR yes 23498842
chr15 55572034 55572048 JUN JASPAR yes 70527795
chr15 55572034 55572049 MAFK JASPAR yes 23498843
chr15 55572034 55572049 MAFK JASPAR yes 70527796
chr15 55572035 55572046 BATF JASPAR yes 23498844
chr15 55572035 55572046 BATF JASPAR yes 70527797
chr15 55572043 55572057 TCF7L2 JASPAR yes 23498845
chr15 55572043 55572057 TCF7L2 JASPAR yes 70527798
chr15 55572048 55572054 SOX10 JASPAR yes 23498846
chr15 55572048 55572054 SOX10 JASPAR yes 70527799
chr15 55572055 55572066 ESRRA JASPAR yes 23498847
chr15 55572055 55572066 ESRRA JASPAR yes 70527800
chr15 55572055 55572068 NR2F1 JASPAR yes 23498848
chr15 55572055 55572068 NR2F1 JASPAR yes 70527801
chr15 55572059 55572063 ESR1 TRANSFAC yes 23498849
chr15 55572059 55572063 ESR1 TRANSFAC yes 70527802
chr15 55572071 55572074 MYB TRANSFAC yes 23498850
chr15 55572071 55572074 MYB TRANSFAC yes 70527803
chr15 55572080 55572091 FOS JASPAR yes 23498851
chr15 55572080 55572091 FOSL1 JASPAR yes 23498852
chr15 55572080 55572091 FOS JASPAR yes 70527804
chr15 55572080 55572091 FOSL1 JASPAR yes 70527805
chr15 55572081 55572090 JDP2 JASPAR yes 23498853
chr15 55572081 55572090 JDP2 JASPAR yes 70527806
chr15 55572127 55572147 PPARG JASPAR yes 23498854
chr15 55572127 55572147 PPARG JASPAR yes 70527807
SNP sites on vista20048[chr15:55571935-55572134]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 55571937 rs73413677 G A
ATF2 EP300 FOS JUN JUND NR2F2 TAL1 TCF7L2 TEAD1 TEAD4
3967755
chr15 55572106 rs192086337 A T
ATF2 EP300 FOS FOSL1 JUN JUND NR2F2 RUNX3 TAL1 TCF7L2 TEAD4
3967756
chr15 55572125 rs114471163 G A,C
ATF2 EP300 FOS FOSL1 JUN JUND NR2F2 RUNX3 TAL1 TCF7L2
3967757
Genes possibly regulated by vista20048[chr15:55571935-55572134]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 55473004 55489265 - RSL24D1 ENSG00000137876.5 55489265 0.64 0.98 13956 17330
chr15 55495164 55611311 - RAB27A ENSG00000069974.11 55611311 0.78 0.94 13957 60823
chr15 55611158 55647846 + PIGB ENSG00000069943.5 55611158 0.66 1.0 13958 60976
Expression level of Genes
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miRNAs possibly regulated by vista20048[chr15:55571935-55572134]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results