EnhancerDB
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  3. vista20050[chr15:55581016-55581448]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20050[chr15:55581016-55581448]
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Tissue distribution of vista20050
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Transcription factor that possibly regulate vista20050[chr15:55581016-55581448]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 55581136 55583143 POLR2A UCSC Txn Factor no Conserved 108139880
chr15 55581199 55581523 CEBPB UCSC Txn Factor no Conserved 108139882
chr15 55581016 55581031 FOXP1 JASPAR yes 70527813
chr15 55581018 55581033 FOXP1 JASPAR yes 70527814
chr15 55581018 55581039 IRF1 JASPAR yes 70527815
chr15 55581034 55581049 AR JASPAR yes 70527816
chr15 55581048 55581059 FOXH1 JASPAR yes 70527817
chr15 55581049 55581061 FOXC2 JASPAR yes 70527818
chr15 55581057 55581070 DUXA JASPAR yes 70527819
chr15 55581058 55581069 DUX4 JASPAR yes 70527820
chr15 55581058 55581069 PHOX2A JASPAR yes 70527821
chr15 55581058 55581069 PROP1 JASPAR yes 70527822
chr15 55581060 55581070 HOXD13 JASPAR yes 70527823
chr15 55581061 55581071 ALX3 JASPAR yes 70527824
chr15 55581061 55581071 EMX1 JASPAR yes 70527825
chr15 55581061 55581071 EMX2 JASPAR yes 70527826
chr15 55581061 55581071 ESX1 JASPAR yes 70527827
chr15 55581061 55581071 GBX2 JASPAR yes 70527828
chr15 55581061 55581071 GSX1 JASPAR yes 70527829
chr15 55581061 55581071 GSX2 JASPAR yes 70527830
chr15 55581061 55581071 HESX1 JASPAR yes 70527831
chr15 55581061 55581071 HOXB2 JASPAR yes 70527832
chr15 55581061 55581071 HOXB3 JASPAR yes 70527833
chr15 55581061 55581071 LBX2 JASPAR yes 70527834
chr15 55581061 55581071 LHX2 JASPAR yes 70527835
chr15 55581061 55581071 LHX6 JASPAR yes 70527836
chr15 55581061 55581071 MEOX1 JASPAR yes 70527837
chr15 55581061 55581071 MEOX2 JASPAR yes 70527838
chr15 55581061 55581071 MIXL1 JASPAR yes 70527839
chr15 55581061 55581071 MNX1 JASPAR yes 70527840
chr15 55581061 55581071 NOTO JASPAR yes 70527841
chr15 55581061 55581071 RAX JASPAR yes 70527842
chr15 55581062 55581070 BSX JASPAR yes 70527843
chr15 55581062 55581070 DLX6 JASPAR yes 70527844
chr15 55581062 55581070 EN1 JASPAR yes 70527845
chr15 55581062 55581070 ISX JASPAR yes 70527846
chr15 55581062 55581070 LBX1 JASPAR yes 70527847
chr15 55581062 55581070 LHX9 JASPAR yes 70527848
chr15 55581062 55581070 LMX1A JASPAR yes 70527849
chr15 55581062 55581070 LMX1B JASPAR yes 70527850
chr15 55581062 55581070 NKX6-1 JASPAR yes 70527851
chr15 55581062 55581070 NKX6-2 JASPAR yes 70527852
chr15 55581062 55581070 PAX4 JASPAR yes 70527853
chr15 55581062 55581070 PDX1 JASPAR yes 70527854
chr15 55581062 55581070 PRRX1 JASPAR yes 70527855
chr15 55581062 55581070 RAX2 JASPAR yes 70527856
chr15 55581062 55581070 SHOX JASPAR yes 70527857
chr15 55581062 55581070 UNCX JASPAR yes 70527858
chr15 55581062 55581070 VAX1 JASPAR yes 70527859
chr15 55581062 55581070 VAX2 JASPAR yes 70527860
chr15 55581062 55581070 VSX1 JASPAR yes 70527861
chr15 55581062 55581070 VSX2 JASPAR yes 70527862
chr15 55581062 55581072 POU6F2 JASPAR yes 70527863
chr15 55581082 55581097 MEF2C JASPAR yes 70527864
chr15 55581107 55581111 TEAD2 TRANSFAC yes 70527865
chr15 55581108 55581116 RHOXF1 JASPAR yes 70527866
chr15 55581123 55581127 H1TF2 TRANSFAC yes 70527867
chr15 55581123 55581127 NFE TRANSFAC yes 70527868
chr15 55581123 55581127 SRF TRANSFAC yes 70527869
chr15 55581130 55581143 ZBTB18 JASPAR yes 70527870
chr15 55581140 55581159 PAX5 JASPAR yes 70527871
chr15 55581149 55581160 CDX2 JASPAR yes 70527872
chr15 55581150 55581161 HOXA10 JASPAR yes 70527873
chr15 55581151 55581160 CDX1 JASPAR yes 70527874
chr15 55581151 55581161 HOXA13 JASPAR yes 70527875
chr15 55581151 55581161 HOXB13 JASPAR yes 70527876
chr15 55581177 55581182 ETS2 TRANSFAC yes 70527877
chr15 55581183 55581195 TAL1 JASPAR yes 70527878
chr15 55581184 55581197 ZBTB18 JASPAR yes 70527879
chr15 55581185 55581195 FIGLA JASPAR yes 70527880
chr15 55581185 55581195 MSC JASPAR yes 70527881
chr15 55581185 55581195 MYF6 JASPAR yes 70527882
chr15 55581185 55581195 TFAP4 JASPAR yes 70527883
chr15 55581185 55581197 TAL1 JASPAR yes 70527884
chr15 55581200 55581210 MZF1 JASPAR yes 70527885
chr15 55581224 55581239 TFAP2A JASPAR yes 70527886
chr15 55581224 55581239 TFAP2C JASPAR yes 70527887
chr15 55581226 55581241 TFAP2A JASPAR yes 70527888
chr15 55581226 55581241 TFAP2C JASPAR yes 70527889
chr15 55581227 55581238 TFAP2A JASPAR yes 70527890
chr15 55581227 55581238 TFAP2B JASPAR yes 70527891
chr15 55581235 55581246 USF2 JASPAR yes 70527892
chr15 55581264 55581270 ETS1 JASPAR yes 70527893
chr15 55581274 55581279 ETS2 TRANSFAC yes 70527894
chr15 55581309 55581324 TFAP2A JASPAR yes 70527895
chr15 55581309 55581324 TFAP2C JASPAR yes 70527896
chr15 55581315 55581329 PAX6 JASPAR yes 70527897
chr15 55581326 55581332 TCF4 TRANSFAC yes 70527898
chr15 55581354 55581374 TP53 JASPAR yes 70527899
chr15 55581365 55581371 NFIC JASPAR yes 70527900
chr15 55581370 55581380 HMBOX1 JASPAR yes 70527901
chr15 55581384 55581392 MEIS2 JASPAR yes 70527902
chr15 55581384 55581392 MEIS3 JASPAR yes 70527903
chr15 55581385 55581389 NFE TRANSFAC yes 70527904
chr15 55581385 55581398 JUN JASPAR yes 70527905
SNP sites on vista20050[chr15:55581016-55581448]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 55581024 rs12909207 A C
FOXP1 IRF1
3967834
chr15 55581037 rs181125520 G C
AR IRF1
3967835
chr15 55581055 rs565639197 C T
FOXC2 FOXH1
3967836
chr15 55581242 rs11857829 T A,C
CEBPB POLR2A USF2
3967837
chr15 55581302 rs200501538 A AAG
CEBPB POLR2A
3967838
chr15 55581302 rs377561687 A AAG
CEBPB POLR2A
3967839
chr15 55581348 rs2305424 T C
CEBPB POLR2A
3967840
Genes possibly regulated by vista20050[chr15:55581016-55581448]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 55473004 55489265 - RSL24D1 ENSG00000137876.5 55489265 0.64 0.98 13956 8249
chr15 55495164 55611311 - RAB27A ENSG00000069974.11 55611311 0.78 0.94 13957 70137
chr15 55611158 55647846 + PIGB ENSG00000069943.5 55611158 0.66 1.0 13958 70290
Expression level of Genes
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miRNAs possibly regulated by vista20050[chr15:55581016-55581448]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results