EnhancerDB
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  3. vista20055[chr15:55977497-55977782]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20055[chr15:55977497-55977782]
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Tissue distribution of vista20055
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Transcription factor that possibly regulate vista20055[chr15:55977497-55977782]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 55977547 55977557 RELA JASPAR yes 70528058
chr15 55977547 55977558 NFKB1 JASPAR yes 70528059
chr15 55977551 55977562 STAT3 JASPAR yes 70528060
chr15 55977568 55977578 ZNF740 JASPAR yes 70528061
chr15 55977578 55977587 PITX3 JASPAR yes 70528062
chr15 55977578 55977588 GSC JASPAR yes 70528063
chr15 55977579 55977587 RHOXF1 JASPAR yes 70528064
chr15 55977582 55977600 SRF JASPAR yes 70528065
chr15 55977588 55977592 YY1 TRANSFAC yes 70528066
chr15 55977616 55977631 SOX21 JASPAR yes 70528067
chr15 55977616 55977632 SOX4 JASPAR yes 70528068
chr15 55977623 55977632 SOX9 JASPAR yes 70528069
chr15 55977632 55977638 ZNF354C JASPAR yes 70528070
chr15 55977651 55977664 POU2F2 JASPAR yes 70528071
chr15 55977651 55977665 POU1F1 JASPAR yes 70528072
chr15 55977652 55977664 POU3F1 JASPAR yes 70528073
chr15 55977652 55977664 POU3F2 JASPAR yes 70528074
chr15 55977652 55977665 POU3F3 JASPAR yes 70528075
chr15 55977653 55977657 YY1 TRANSFAC yes 70528076
chr15 55977653 55977665 POU2F1 JASPAR yes 70528077
chr15 55977654 55977661 POU2F1 TRANSFAC yes 70528078
chr15 55977654 55977661 POU2F2C TRANSFAC yes 70528079
chr15 55977654 55977661 POU2F2 TRANSFAC yes 70528080
chr15 55977654 55977662 POU2F1 TRANSFAC yes 70528081
chr15 55977654 55977663 POU3F4 JASPAR yes 70528082
chr15 55977654 55977663 POU5F1B JASPAR yes 70528083
chr15 55977656 55977672 POU4F2 JASPAR yes 70528084
chr15 55977661 55977679 IRF2 JASPAR yes 70528085
chr15 55977662 55977683 IRF1 JASPAR yes 70528086
chr15 55977664 55977667 MYB TRANSFAC yes 70528087
chr15 55977664 55977679 PRDM1 JASPAR yes 70528088
chr15 55977664 55977679 STAT2 JASPAR yes 70528089
chr15 55977695 55977703 FOXO3 JASPAR yes 70528090
chr15 55977695 55977712 BCL6B JASPAR yes 70528091
chr15 55977697 55977704 NFATC2 JASPAR yes 70528092
chr15 55977705 55977716 NFIL3 JASPAR yes 70528093
chr15 55977706 55977717 CEBPA JASPAR yes 70528094
chr15 55977706 55977718 DBP JASPAR yes 70528095
chr15 55977706 55977718 HLF JASPAR yes 70528096
chr15 55977706 55977718 TEF JASPAR yes 70528097
chr15 55977708 55977719 NFIL3 JASPAR yes 70528098
chr15 55977723 55977736 ATF4 JASPAR yes 70528099
chr15 55977764 55977774 TFAP4 JASPAR yes 70528100
chr15 55977769 55977773 NFE TRANSFAC yes 70528101
SNP sites on vista20055[chr15:55977497-55977782]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 55977580 rs77735641 A G
GSC PITX3 RHOXF1
3968626
chr15 55977742 rs114133880 G A,C no 3968627
chr15 55977767 rs76847751 C A
TFAP4
3968628
Genes possibly regulated by vista20055[chr15:55977497-55977782]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 55831088 55881145 - PYGO1 ENSG00000171016.7 55881145 0.74 0.89 13962 3648
chr15 55903744 56035288 - PRTG ENSG00000166450.8 56035288 0.93 0.89 13963 42494
Expression level of Genes
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miRNAs possibly regulated by vista20055[chr15:55977497-55977782]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results