EnhancerDB
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  3. vista20057[chr15:56029665-56029817]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20057[chr15:56029665-56029817]
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Tissue distribution of vista20057
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Transcription factor that possibly regulate vista20057[chr15:56029665-56029817]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 56029469 56029879 GATA2 UCSC Txn Factor no Conserved 108139951
chr15 56029711 56029873 EP300 UCSC Txn Factor no Conserved 108139955
chr15 56029667 56029681 GATA2 JASPAR yes 70528141
chr15 56029669 56029677 GATA3 JASPAR yes 70528142
chr15 56029669 56029677 GATA5 JASPAR yes 70528143
chr15 56029675 56029694 RFX2 JASPAR yes 70528144
chr15 56029680 56029692 IRF1 JASPAR yes 70528145
chr15 56029686 56029695 NKX3-2 JASPAR yes 70528146
chr15 56029687 56029695 ISL2 JASPAR yes 70528147
chr15 56029693 56029698 ETS2 TRANSFAC yes 70528148
chr15 56029708 56029722 POU1F1 JASPAR yes 70528149
chr15 56029710 56029714 YY1 TRANSFAC yes 70528150
chr15 56029722 56029732 TEAD1 JASPAR yes 70528151
chr15 56029722 56029732 TEAD4 JASPAR yes 70528152
chr15 56029723 56029731 TEAD3 JASPAR yes 70528153
chr15 56029750 56029753 MYB TRANSFAC yes 23508115
chr15 56029750 56029753 MYB TRANSFAC yes 70528154
chr15 56029754 56029757 MYB TRANSFAC yes 23508116
chr15 56029754 56029757 MYB TRANSFAC yes 70528155
chr15 56029770 56029785 LEF1 JASPAR yes 23508117
chr15 56029770 56029785 LEF1 JASPAR yes 70528156
chr15 56029774 56029780 TCF4 TRANSFAC yes 23508118
chr15 56029774 56029780 TCF4 TRANSFAC yes 70528157
chr15 56029780 56029795 NFYB JASPAR yes 23508119
chr15 56029780 56029795 NFYB JASPAR yes 70528158
chr15 56029782 56029798 NFYA JASPAR yes 23508120
chr15 56029782 56029798 NFYA JASPAR yes 70528159
chr15 56029787 56029791 H1TF2 TRANSFAC yes 23508121
chr15 56029787 56029791 NFE TRANSFAC yes 23508122
chr15 56029787 56029791 SRF TRANSFAC yes 23508123
chr15 56029787 56029791 H1TF2 TRANSFAC yes 70528160
chr15 56029787 56029791 NFE TRANSFAC yes 70528161
chr15 56029787 56029791 SRF TRANSFAC yes 70528162
chr15 56029794 56029804 RORA JASPAR yes 23508124
chr15 56029794 56029804 RORA JASPAR yes 70528163
chr15 56029799 56029803 ESR1 TRANSFAC yes 23508125
chr15 56029799 56029803 ESR1 TRANSFAC yes 70528164
chr15 56029806 56029820 GATA2 JASPAR yes 23508126
chr15 56029806 56029820 GATA2 JASPAR yes 70528165
SNP sites on vista20057[chr15:56029665-56029817]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 56029679 rs113272773 T C
GATA2 RFX2
3968821
Genes possibly regulated by vista20057[chr15:56029665-56029817]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 55903744 56035288 - PRTG ENSG00000166450.8 56035288 0.93 0.89 13963 94529
Expression level of Genes
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miRNAs possibly regulated by vista20057[chr15:56029665-56029817]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results