EnhancerDB
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  3. vista20067[chr15:56452441-56452566]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20067[chr15:56452441-56452566]
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Tissue distribution of vista20067
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Transcription factor that possibly regulate vista20067[chr15:56452441-56452566]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 56452478 56452488 CUX1 JASPAR yes 70528510
chr15 56452478 56452488 CUX2 JASPAR yes 70528511
chr15 56452478 56452490 PBX1 JASPAR yes 70528512
chr15 56452497 56452512 MEF2A JASPAR yes 70528513
chr15 56452499 56452509 MEF2A JASPAR yes 70528514
chr15 56452500 56452510 EVX2 JASPAR yes 70528515
chr15 56452500 56452510 LHX2 JASPAR yes 70528516
chr15 56452500 56452510 MEOX1 JASPAR yes 70528517
chr15 56452500 56452510 MEOX2 JASPAR yes 70528518
chr15 56452500 56452510 NOTO JASPAR yes 70528519
chr15 56452500 56452510 POU6F1 JASPAR yes 70528520
chr15 56452501 56452509 LBX1 JASPAR yes 70528521
chr15 56452501 56452509 PDX1 JASPAR yes 70528522
chr15 56452501 56452509 VAX1 JASPAR yes 70528523
chr15 56452501 56452509 VAX2 JASPAR yes 70528524
chr15 56452501 56452509 VSX1 JASPAR yes 70528525
chr15 56452501 56452509 VSX2 JASPAR yes 70528526
chr15 56452501 56452511 POU6F2 JASPAR yes 70528527
chr15 56452513 56452534 IRF1 JASPAR yes 70528528
chr15 56452515 56452530 PRDM1 JASPAR yes 70528529
chr15 56452515 56452530 STAT2 JASPAR yes 70528530
chr15 56452530 56452535 NFY TRANSFAC yes 70528531
chr15 56452543 56452564 IRF1 JASPAR yes 70528532
chr15 56452545 56452560 STAT2 JASPAR yes 70528533
chr15 56452548 56452563 FOXP1 JASPAR yes 70528534
chr15 56452549 56452564 FOXP1 JASPAR yes 70528535
chr15 56452550 56452565 FOXP1 JASPAR yes 70528536
chr15 56452551 56452566 FOXP1 JASPAR yes 70528537
SNP sites on vista20067[chr15:56452441-56452566]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 56452503 rs143724116 T A
EVX2 LBX1 LHX2 MEF2A MEOX1 MEOX2 NOTO PDX1 POU6F1 POU6F2 VAX1 VAX2 VSX1 VSX2
3970846
chr15 56452534 rs79307249 T G
IRF1 NFY
3970847
chr15 56452550 rs531743741 T C,G
FOXP1 IRF1 STAT2
3970848
Genes possibly regulated by vista20067[chr15:56452441-56452566]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 56379478 56535483 - RFX7 ENSG00000181827.10 56535483 0.71 0.99 13965 17083
chr15 56536207 56738195 + TEX9 ENSG00000151575.10 56536207 0.93 0.98 13966 16359
Expression level of Genes
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miRNAs possibly regulated by vista20067[chr15:56452441-56452566]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results