EnhancerDB
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  3. vista20071[chr15:56615348-56615607]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20071[chr15:56615348-56615607]
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Tissue distribution of vista20071
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Transcription factor that possibly regulate vista20071[chr15:56615348-56615607]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 56615346 56615359 JUN JASPAR yes 23534283
chr15 56615346 56615359 JUN JASPAR yes 70528635
chr15 56615351 56615364 POU2F2 JASPAR yes 23534284
chr15 56615351 56615364 POU2F2 JASPAR yes 70528636
chr15 56615351 56615365 POU1F1 JASPAR yes 23534285
chr15 56615351 56615365 POU1F1 JASPAR yes 70528637
chr15 56615363 56615369 SOX10 JASPAR yes 23534286
chr15 56615363 56615369 SOX10 JASPAR yes 70528638
chr15 56615369 56615384 SCRT1 JASPAR yes 23534287
chr15 56615369 56615384 SCRT1 JASPAR yes 70528639
chr15 56615371 56615384 SCRT2 JASPAR yes 23534288
chr15 56615371 56615384 SCRT2 JASPAR yes 70528640
chr15 56615381 56615402 ZNF263 JASPAR yes 23534289
chr15 56615381 56615402 ZNF263 JASPAR yes 70528641
chr15 56615403 56615407 H1TF2 TRANSFAC yes 23534290
chr15 56615403 56615407 NFE TRANSFAC yes 23534291
chr15 56615403 56615407 SRF TRANSFAC yes 23534292
chr15 56615403 56615407 H1TF2 TRANSFAC yes 70528642
chr15 56615403 56615407 NFE TRANSFAC yes 70528643
chr15 56615403 56615407 SRF TRANSFAC yes 70528644
chr15 56615465 56615486 IRF1 JASPAR yes 23534293
chr15 56615465 56615486 IRF1 JASPAR yes 70528645
chr15 56615467 56615473 NFIC JASPAR yes 23534294
chr15 56615467 56615473 NFIC JASPAR yes 70528646
chr15 56615469 56615484 PRDM1 JASPAR yes 23534295
chr15 56615469 56615484 PRDM1 JASPAR yes 70528647
chr15 56615469 56615487 IRF2 JASPAR yes 23534296
chr15 56615469 56615487 IRF2 JASPAR yes 70528648
chr15 56615471 56615492 IRF1 JASPAR yes 23534297
chr15 56615471 56615492 IRF1 JASPAR yes 70528649
chr15 56615478 56615483 ETS2 TRANSFAC yes 23534298
chr15 56615478 56615483 ETS2 TRANSFAC yes 70528650
chr15 56615508 56615521 POU2F2 JASPAR yes 23534299
chr15 56615508 56615521 POU2F2 JASPAR yes 70528651
chr15 56615510 56615524 POU4F1 JASPAR yes 23534300
chr15 56615510 56615524 POU4F1 JASPAR yes 70528652
chr15 56615510 56615526 POU4F2 JASPAR yes 23534301
chr15 56615510 56615526 POU4F3 JASPAR yes 23534302
chr15 56615510 56615526 POU4F2 JASPAR yes 70528653
chr15 56615510 56615526 POU4F3 JASPAR yes 70528654
chr15 56615558 56615569 STAT1 JASPAR yes 23534303
chr15 56615558 56615569 STAT1 JASPAR yes 70528655
chr15 56615562 56615567 ETS2 TRANSFAC yes 23534304
chr15 56615562 56615567 ETS2 TRANSFAC yes 70528656
chr15 56615563 56615578 AR JASPAR yes 23534305
chr15 56615563 56615578 AR JASPAR yes 70528657
chr15 56615563 56615580 NR3C1 JASPAR yes 23534306
chr15 56615563 56615580 NR3C2 JASPAR yes 23534307
chr15 56615563 56615580 NR3C1 JASPAR yes 70528658
chr15 56615563 56615580 NR3C2 JASPAR yes 70528659
chr15 56615574 56615579 GATA1 TRANSFAC yes 23534308
chr15 56615574 56615579 GATA1 TRANSFAC yes 70528660
chr15 56615587 56615601 SPI1 JASPAR yes 23534309
chr15 56615587 56615601 SPIC JASPAR yes 23534310
chr15 56615587 56615601 SPI1 JASPAR yes 70528661
chr15 56615587 56615601 SPIC JASPAR yes 70528662
SNP sites on vista20071[chr15:56615348-56615607]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 56615463 rs191087128 A C,G no 3971503
chr15 56615572 rs2718923 T A
AR NR3C1 NR3C2
3971504
chr15 56615576 rs2725857 T C
AR GATA1 NR3C1 NR3C2
3971505
chr15 56615593 rs182110936 C G,T
SPI1 SPIC
3971506
Genes possibly regulated by vista20071[chr15:56615348-56615607]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 56379478 56535483 - RFX7 ENSG00000181827.10 56535483 0.71 0.99 13965 20135
chr15 56536207 56738195 + TEX9 ENSG00000151575.10 56536207 0.93 0.98 13966 20859
Expression level of Genes
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miRNAs possibly regulated by vista20071[chr15:56615348-56615607]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results