EnhancerDB
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  3. vista20086[chr15:57648977-57649377]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20086[chr15:57648977-57649377]
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Tissue distribution of vista20086
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Transcription factor that possibly regulate vista20086[chr15:57648977-57649377]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 57648956 57649136 TEAD4 UCSC Txn Factor no Conserved 108140361
chr15 57648978 57648996 RARA JASPAR yes 23607126
chr15 57648978 57648996 RARA JASPAR yes 70529294
chr15 57649039 57649049 TEAD1 JASPAR yes 23607127
chr15 57649039 57649049 TEAD4 JASPAR yes 23607128
chr15 57649039 57649049 TEAD1 JASPAR yes 70529295
chr15 57649039 57649049 TEAD4 JASPAR yes 70529296
chr15 57649040 57649048 TEAD3 JASPAR yes 23607129
chr15 57649040 57649048 TEAD3 JASPAR yes 70529297
chr15 57649048 57649058 TEAD1 JASPAR yes 23607130
chr15 57649048 57649058 TEAD4 JASPAR yes 23607131
chr15 57649048 57649058 TEAD1 JASPAR yes 70529298
chr15 57649048 57649058 TEAD4 JASPAR yes 70529299
chr15 57649048 57649060 TEAD1 JASPAR yes 23607132
chr15 57649048 57649060 TEAD1 JASPAR yes 70529300
chr15 57649049 57649057 TEAD3 JASPAR yes 23607133
chr15 57649049 57649057 TEAD3 JASPAR yes 70529301
chr15 57649079 57649083 NFE TRANSFAC yes 23607134
chr15 57649079 57649083 NFE TRANSFAC yes 70529302
chr15 57649082 57649088 MYC TRANSFAC yes 23607135
chr15 57649082 57649088 MYC TRANSFAC yes 70529303
chr15 57649083 57649098 MEF2C JASPAR yes 23607136
chr15 57649083 57649098 MEF2C JASPAR yes 70529304
chr15 57649084 57649099 MEF2A JASPAR yes 23607137
chr15 57649084 57649099 MEF2A JASPAR yes 70529305
chr15 57649087 57649102 FOXP1 JASPAR yes 23607138
chr15 57649087 57649102 FOXP1 JASPAR yes 70529306
chr15 57649088 57649109 IRF1 JASPAR yes 23607139
chr15 57649088 57649109 IRF1 JASPAR yes 70529307
chr15 57649091 57649106 FOXP1 JASPAR yes 23607140
chr15 57649091 57649106 FOXP1 JASPAR yes 70529308
chr15 57649093 57649099 TBP TRANSFAC yes 23607141
chr15 57649093 57649099 TBP TRANSFAC yes 70529309
chr15 57649093 57649108 FOXP1 JASPAR yes 23607142
chr15 57649093 57649108 FOXP1 JASPAR yes 70529310
chr15 57649093 57649114 IRF1 JASPAR yes 23607143
chr15 57649093 57649114 IRF1 JASPAR yes 70529311
chr15 57649095 57649107 FOXC2 JASPAR yes 23607144
chr15 57649095 57649107 FOXC2 JASPAR yes 70529312
chr15 57649095 57649115 RREB1 JASPAR yes 23607145
chr15 57649095 57649115 RREB1 JASPAR yes 70529313
chr15 57649096 57649107 FOXP2 JASPAR yes 23607146
chr15 57649096 57649107 FOXP2 JASPAR yes 70529314
chr15 57649098 57649110 IRF1 JASPAR yes 23607147
chr15 57649098 57649110 IRF1 JASPAR yes 70529315
chr15 57649100 57649120 RREB1 JASPAR yes 23607148
chr15 57649100 57649120 RREB1 JASPAR yes 70529316
chr15 57649110 57649127 ZNF410 JASPAR yes 23607149
chr15 57649110 57649127 ZNF410 JASPAR yes 70529317
chr15 57649113 57649124 RUNX1 JASPAR yes 23607150
chr15 57649113 57649124 RUNX1 JASPAR yes 70529318
chr15 57649113 57649129 ZNF143 JASPAR yes 23607151
chr15 57649113 57649129 ZNF143 JASPAR yes 70529319
chr15 57649130 57649142 TEF JASPAR yes 23607152
chr15 57649130 57649142 TEF JASPAR yes 70529320
chr15 57649132 57649135 MYB TRANSFAC yes 23607153
chr15 57649132 57649135 MYB TRANSFAC yes 70529321
chr15 57649136 57649151 RUNX2 JASPAR yes 23607154
chr15 57649136 57649151 RUNX2 JASPAR yes 70529322
chr15 57649137 57649140 MYB TRANSFAC yes 23607155
chr15 57649137 57649140 MYB TRANSFAC yes 70529323
chr15 57649142 57649157 ZIC3 JASPAR yes 23607156
chr15 57649142 57649157 ZIC4 JASPAR yes 23607157
chr15 57649142 57649157 ZIC3 JASPAR yes 70529324
chr15 57649142 57649157 ZIC4 JASPAR yes 70529325
chr15 57649143 57649157 GLIS2 JASPAR yes 23607158
chr15 57649143 57649157 GLIS3 JASPAR yes 23607159
chr15 57649143 57649157 GLIS2 JASPAR yes 70529326
chr15 57649143 57649157 GLIS3 JASPAR yes 70529327
chr15 57649147 57649168 ZNF263 JASPAR yes 23607160
chr15 57649147 57649168 ZNF263 JASPAR yes 70529328
chr15 57649157 57649162 ETS2 TRANSFAC yes 23607161
chr15 57649157 57649162 ETS2 TRANSFAC yes 70529329
chr15 57649178 57649192 EBF1 JASPAR yes 23607162
chr15 57649178 57649192 EBF1 JASPAR yes 70529330
chr15 57649204 57649215 DMRT3 JASPAR yes 23607163
chr15 57649204 57649215 DMRT3 JASPAR yes 70529331
chr15 57649241 57649251 SP1 JASPAR yes 23607164
chr15 57649241 57649251 SP1 JASPAR yes 70529332
chr15 57649243 57649248 SP1 TRANSFAC yes 23607165
chr15 57649243 57649248 SP1 TRANSFAC yes 70529333
chr15 57649244 57649249 SP1 TRANSFAC yes 23607166
chr15 57649244 57649249 SP1 TRANSFAC yes 70529334
chr15 57649244 57649250 SP1 TRANSFAC yes 23607167
chr15 57649244 57649250 SP1 TRANSFAC yes 70529335
chr15 57649247 57649262 NR2C2 JASPAR yes 23607168
chr15 57649247 57649262 NR2C2 JASPAR yes 70529336
chr15 57649303 57649323 PPARG JASPAR yes 23607169
chr15 57649303 57649323 PPARG JASPAR yes 70529337
chr15 57649309 57649319 TFAP4 JASPAR yes 23607170
chr15 57649309 57649319 TFAP4 JASPAR yes 70529338
chr15 57649311 57649324 NR2F1 JASPAR yes 23607171
chr15 57649311 57649324 NR2F1 JASPAR yes 70529339
chr15 57649327 57649341 PAX6 JASPAR yes 23607172
chr15 57649327 57649341 PAX6 JASPAR yes 70529340
chr15 57649356 57649361 GATA2 JASPAR yes 23607173
chr15 57649356 57649361 GATA2 JASPAR yes 70529341
chr15 57649364 57649382 IRF2 JASPAR yes 23607174
chr15 57649364 57649382 IRF2 JASPAR yes 70529342
chr15 57649365 57649386 IRF1 JASPAR yes 23607175
chr15 57649365 57649386 IRF1 JASPAR yes 70529343
chr15 57649366 57649379 SMAD2 JASPAR yes 23607176
chr15 57649366 57649379 SMAD2 JASPAR yes 70529344
chr15 57649367 57649382 PRDM1 JASPAR yes 23607177
chr15 57649367 57649382 PRDM1 JASPAR yes 70529345
chr15 57649368 57649382 STAT1 JASPAR yes 23607178
chr15 57649368 57649382 STAT1 JASPAR yes 70529346
chr15 57649369 57649381 IRF1 JASPAR yes 23607179
chr15 57649369 57649381 IRF1 JASPAR yes 70529347
chr15 57649369 57649390 ZNF263 JASPAR yes 23607180
chr15 57649369 57649390 ZNF263 JASPAR yes 70529348
SNP sites on vista20086[chr15:57648977-57649377]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 57649106 rs143638873 A G
FOXC2 FOXP1 FOXP2 IRF1 RREB1 TEAD4
3977996
chr15 57649107 rs116585125 A T
FOXC2 FOXP1 FOXP2 IRF1 RREB1 TEAD4
3977997
chr15 57649110 rs147180439 A T
IRF1 RREB1 TEAD4 ZNF410
3977998
chr15 57649239 rs531571328 C T no 3977999
chr15 57649259 rs2440953 G T
NR2C2
3978000
chr15 57649359 rs78053087 T C
GATA2
3978001
chr15 57649375 rs535179500 C T
IRF1 IRF2 PRDM1 SMAD2 STAT1 ZNF263
3978002
Genes possibly regulated by vista20086[chr15:57648977-57649377]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 57668165 57842925 + CGNL1 ENSG00000128849.9 57668165 0.89 0.99 13970 81212
Expression level of Genes
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miRNAs possibly regulated by vista20086[chr15:57648977-57649377]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results