EnhancerDB
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  3. vista20121[chr15:58809430-58809837]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20121[chr15:58809430-58809837]
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Tissue distribution of vista20121
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Transcription factor that possibly regulate vista20121[chr15:58809430-58809837]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 58809290 58809748 CTCF UCSC Txn Factor no Conserved 108140972
chr15 58809433 58809449 SOX8 JASPAR yes 23682893
chr15 58809433 58809449 SOX8 JASPAR yes 70531162
chr15 58809434 58809438 H1TF2 TRANSFAC yes 23682894
chr15 58809434 58809438 NFE TRANSFAC yes 23682895
chr15 58809434 58809438 SRF TRANSFAC yes 23682896
chr15 58809434 58809438 H1TF2 TRANSFAC yes 70531163
chr15 58809434 58809438 NFE TRANSFAC yes 70531164
chr15 58809434 58809438 SRF TRANSFAC yes 70531165
chr15 58809441 58809445 H1TF2 TRANSFAC yes 23682897
chr15 58809441 58809445 NFE TRANSFAC yes 23682898
chr15 58809441 58809445 SRF TRANSFAC yes 23682899
chr15 58809441 58809445 H1TF2 TRANSFAC yes 70531166
chr15 58809441 58809445 NFE TRANSFAC yes 70531167
chr15 58809441 58809445 SRF TRANSFAC yes 70531168
chr15 58809463 58809478 RFX5 JASPAR yes 23682900
chr15 58809463 58809478 RFX5 JASPAR yes 70531169
chr15 58809502 58809519 RXRA JASPAR yes 23682901
chr15 58809502 58809519 RXRA JASPAR yes 70531170
chr15 58809511 58809530 CTCF JASPAR yes 23682902
chr15 58809511 58809530 CTCF JASPAR yes 70531171
chr15 58809535 58809542 JUN TRANSFAC yes 23682903
chr15 58809535 58809542 JUN TRANSFAC yes 70531172
chr15 58809551 58809555 NFE TRANSFAC yes 23682904
chr15 58809551 58809555 NFE TRANSFAC yes 70531173
chr15 58809555 58809568 ZBTB18 JASPAR yes 23682905
chr15 58809555 58809568 ZBTB18 JASPAR yes 70531174
chr15 58809559 58809578 RFX2 JASPAR yes 23682906
chr15 58809559 58809578 RFX2 JASPAR yes 70531175
chr15 58809563 58809579 RFX2 JASPAR yes 23682907
chr15 58809563 58809579 RFX3 JASPAR yes 23682908
chr15 58809563 58809579 RFX5 JASPAR yes 23682909
chr15 58809563 58809579 RFX2 JASPAR yes 70531176
chr15 58809563 58809579 RFX3 JASPAR yes 70531177
chr15 58809563 58809579 RFX5 JASPAR yes 70531178
chr15 58809571 58809574 MYB TRANSFAC yes 23682910
chr15 58809571 58809574 MYB TRANSFAC yes 70531179
chr15 58809572 58809588 SOX4 JASPAR yes 23682911
chr15 58809572 58809588 SOX8 JASPAR yes 23682912
chr15 58809572 58809588 SOX4 JASPAR yes 70531180
chr15 58809572 58809588 SOX8 JASPAR yes 70531181
chr15 58809613 58809619 MYC TRANSFAC yes 23682913
chr15 58809613 58809619 MYC TRANSFAC yes 70531182
chr15 58809614 58809628 CREB3L1 JASPAR yes 23682914
chr15 58809614 58809628 CREB3L1 JASPAR yes 70531183
chr15 58809699 58809703 YY1 TRANSFAC yes 23682915
chr15 58809699 58809703 YY1 TRANSFAC yes 70531184
chr15 58809718 58809727 RUNX2 JASPAR yes 23682916
chr15 58809718 58809727 RUNX2 JASPAR yes 70531185
chr15 58809718 58809728 RUNX3 JASPAR yes 23682917
chr15 58809718 58809728 RUNX3 JASPAR yes 70531186
chr15 58809722 58809738 SOX8 JASPAR yes 23682918
chr15 58809722 58809738 SOX8 JASPAR yes 70531187
chr15 58809777 58809787 SP1 JASPAR yes 23682919
chr15 58809777 58809787 SP1 JASPAR yes 70531188
chr15 58809779 58809788 THAP1 JASPAR yes 23682920
chr15 58809779 58809788 THAP1 JASPAR yes 70531189
chr15 58809786 58809801 STAT1 JASPAR yes 23682921
chr15 58809786 58809801 STAT1 JASPAR yes 70531190
chr15 58809788 58809799 STAT1 JASPAR yes 23682922
chr15 58809788 58809799 STAT3 JASPAR yes 23682923
chr15 58809788 58809799 STAT1 JASPAR yes 70531191
chr15 58809788 58809799 STAT3 JASPAR yes 70531192
chr15 58809794 58809804 REL JASPAR yes 23682924
chr15 58809794 58809804 REL JASPAR yes 70531193
chr15 58809803 58809809 LEF1 TRANSFAC yes 23682925
chr15 58809803 58809809 SOX10 JASPAR yes 23682926
chr15 58809803 58809809 LEF1 TRANSFAC yes 70531194
chr15 58809803 58809809 SOX10 JASPAR yes 70531195
chr15 58809820 58809832 E2F8 JASPAR yes 23682927
chr15 58809820 58809832 E2F8 JASPAR yes 70531196
chr15 58809820 58809840 TBX19 JASPAR yes 23682928
chr15 58809820 58809840 TBX19 JASPAR yes 70531197
chr15 58809822 58809838 T JASPAR yes 23682929
chr15 58809822 58809838 T JASPAR yes 70531198
chr15 58809822 58809842 TBX19 JASPAR yes 23682930
chr15 58809822 58809842 TBX19 JASPAR yes 70531199
chr15 58809824 58809840 T JASPAR yes 23682931
chr15 58809824 58809840 T JASPAR yes 70531200
SNP sites on vista20121[chr15:58809430-58809837]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 58809493 rs7174210 G T
CTCF
3987836
chr15 58809548 rs111627204 C T
CTCF
3987837
chr15 58809598 rs146265745 G T
CTCF
3987838
chr15 58809664 rs547842102 C A
CTCF
3987839
chr15 58809668 rs527780691 TC T
CTCF
3987840
chr15 58809670 rs547427910 TGG T
CTCF
3987841
chr15 58809676 rs190844415 G A
CTCF
3987842
chr15 58809806 rs1979178 T G
LEF1 SOX10
3987843
Genes possibly regulated by vista20121[chr15:58809430-58809837]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 58245622 58790065 - ALDH1A2 ENSG00000128918.10 58790065 0.97 0.98 13974 80635
Expression level of Genes
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miRNAs possibly regulated by vista20121[chr15:58809430-58809837]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results