EnhancerDB
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  3. vista20169[chr15:59978652-59978797]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20169[chr15:59978652-59978797]
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Tissue distribution of vista20169
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Transcription factor that possibly regulate vista20169[chr15:59978652-59978797]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 59978612 59978876 SPI1 UCSC Txn Factor no Conserved 108142296
chr15 59978670 59978683 SCRT2 JASPAR yes 23751356
chr15 59978670 59978683 SCRT2 JASPAR yes 70533209
chr15 59978691 59978701 BARHL2 JASPAR yes 23751357
chr15 59978691 59978701 BARHL2 JASPAR yes 70533210
chr15 59978701 59978707 ETS1 JASPAR yes 23751358
chr15 59978701 59978707 ETS1 JASPAR yes 70533211
chr15 59978701 59978715 ONECUT1 JASPAR yes 23751359
chr15 59978701 59978715 ONECUT2 JASPAR yes 23751360
chr15 59978701 59978715 ONECUT3 JASPAR yes 23751361
chr15 59978701 59978715 ONECUT1 JASPAR yes 70533212
chr15 59978701 59978715 ONECUT2 JASPAR yes 70533213
chr15 59978701 59978715 ONECUT3 JASPAR yes 70533214
chr15 59978704 59978714 PAX3 JASPAR yes 23751362
chr15 59978704 59978714 PAX7 JASPAR yes 23751363
chr15 59978704 59978714 PAX3 JASPAR yes 70533215
chr15 59978704 59978714 PAX7 JASPAR yes 70533216
chr15 59978720 59978730 GATA1 TRANSFAC yes 23751364
chr15 59978720 59978730 GATA1 TRANSFAC yes 70533217
chr15 59978724 59978744 TP53 JASPAR yes 23751365
chr15 59978724 59978744 TP53 JASPAR yes 70533218
chr15 59978725 59978736 NFKB1 JASPAR yes 23751366
chr15 59978725 59978736 NFKB1 JASPAR yes 70533219
chr15 59978726 59978736 REL JASPAR yes 23751367
chr15 59978726 59978736 REL JASPAR yes 70533220
chr15 59978727 59978745 TP53 JASPAR yes 23751368
chr15 59978727 59978745 TP53 JASPAR yes 70533221
chr15 59978728 59978748 TP53 JASPAR yes 23751369
chr15 59978728 59978748 TP53 JASPAR yes 70533222
chr15 59978730 59978735 SP1 TRANSFAC yes 23751370
chr15 59978730 59978735 SP1 TRANSFAC yes 70533223
chr15 59978736 59978740 LFA1 TRANSFAC yes 23751371
chr15 59978736 59978740 LFA1 TRANSFAC yes 70533224
chr15 59978738 59978756 IRF2 JASPAR yes 23751372
chr15 59978738 59978756 IRF2 JASPAR yes 70533225
chr15 59978739 59978760 IRF1 JASPAR yes 23751373
chr15 59978739 59978760 IRF1 JASPAR yes 70533226
chr15 59978741 59978756 PRDM1 JASPAR yes 23751374
chr15 59978741 59978756 STAT2 JASPAR yes 23751375
chr15 59978741 59978756 PRDM1 JASPAR yes 70533227
chr15 59978741 59978756 STAT2 JASPAR yes 70533228
chr15 59978743 59978755 IRF1 JASPAR yes 23751376
chr15 59978743 59978755 IRF1 JASPAR yes 70533229
chr15 59978748 59978762 SPI1 JASPAR yes 23751377
chr15 59978748 59978762 SPIC JASPAR yes 23751378
chr15 59978748 59978762 SPI1 JASPAR yes 70533230
chr15 59978748 59978762 SPIC JASPAR yes 70533231
chr15 59978752 59978758 MZF1 JASPAR yes 23751379
chr15 59978752 59978758 MZF1 JASPAR yes 70533232
chr15 59978756 59978760 YY1 TRANSFAC yes 23751380
chr15 59978756 59978760 YY1 TRANSFAC yes 70533233
chr15 59978759 59978768 SRY JASPAR yes 23751381
chr15 59978759 59978768 SRY JASPAR yes 70533234
chr15 59978778 59978786 FOXO3 JASPAR yes 23751382
chr15 59978778 59978786 FOXO3 JASPAR yes 70533235
chr15 59978784 59978788 YY1 TRANSFAC yes 23751383
chr15 59978784 59978788 YY1 TRANSFAC yes 70533236
chr15 59978793 59978805 HNF1B JASPAR yes 23751384
chr15 59978793 59978805 HNF1B JASPAR yes 70533237
SNP sites on vista20169[chr15:59978652-59978797]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 59978737 rs544623035 G A
LFA1 SPI1 TP53
3995211
chr15 59978744 rs141694733 C A,G,T
IRF1 IRF2 PRDM1 SPI1 STAT2 TP53
3995212
chr15 59978758 rs6151456 A G
IRF1 MZF1 SPI1 SPIC YY1
3995213
Genes possibly regulated by vista20169[chr15:59978652-59978797]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 59887074 59932438 + GCNT3 ENSG00000140297.8 59887074 0.96 0.98 13986 8422
chr15 59930261 59949740 - GTF2A2 ENSG00000140307.6 59949740 0.9 0.98 13987 71088
chr15 59951345 59981733 - BNIP2 ENSG00000140299.7 59981733 0.74 0.99 13988 97064
Expression level of Genes
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miRNAs possibly regulated by vista20169[chr15:59978652-59978797]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results