EnhancerDB
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  3. vista20186[chr15:60840388-60840646]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20186[chr15:60840388-60840646]
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Tissue distribution of vista20186
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Transcription factor that possibly regulate vista20186[chr15:60840388-60840646]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 60840302 60840616 RUNX3 UCSC Txn Factor no Conserved 108142525
chr15 60840369 60840576 BATF UCSC Txn Factor no Conserved 108142532
chr15 60840395 60840676 PAX5 UCSC Txn Factor no Conserved 108142538
chr15 60840406 60840420 STAT1 JASPAR yes 23797228
chr15 60840406 60840420 STAT1 JASPAR yes 70534086
chr15 60840429 60840441 PROX1 JASPAR yes 23797229
chr15 60840429 60840441 PROX1 JASPAR yes 70534087
chr15 60840434 60840448 TCF7L2 JASPAR yes 23797230
chr15 60840434 60840448 TCF7L2 JASPAR yes 70534088
chr15 60840452 60840466 TCF7L2 JASPAR yes 23797231
chr15 60840452 60840466 TCF7L2 JASPAR yes 70534089
chr15 60840470 60840485 FOXP1 JASPAR yes 23797232
chr15 60840470 60840485 FOXP1 JASPAR yes 70534090
chr15 60840471 60840482 FOXA1 JASPAR yes 23797233
chr15 60840471 60840482 FOXA1 JASPAR yes 70534091
chr15 60840473 60840484 FOXP2 JASPAR yes 23797234
chr15 60840473 60840484 FOXP2 JASPAR yes 70534092
chr15 60840474 60840482 FOXO3 JASPAR yes 23797235
chr15 60840474 60840482 FOXO3 JASPAR yes 70534093
chr15 60840507 60840515 NKX6-1 JASPAR yes 23797236
chr15 60840507 60840515 NKX6-1 JASPAR yes 70534094
chr15 60840509 60840513 YY1 TRANSFAC yes 23797237
chr15 60840509 60840513 YY1 TRANSFAC yes 70534095
chr15 60840513 60840532 PAX5 JASPAR yes 23797238
chr15 60840513 60840532 PAX5 JASPAR yes 70534096
chr15 60840518 60840532 PAX6 JASPAR yes 23797239
chr15 60840518 60840532 PAX6 JASPAR yes 70534097
chr15 60840534 60840538 NFE TRANSFAC yes 23797240
chr15 60840534 60840538 NFE TRANSFAC yes 70534098
chr15 60840545 60840561 SOX4 JASPAR yes 23797241
chr15 60840545 60840561 SOX4 JASPAR yes 70534099
chr15 60840556 60840560 YY1 TRANSFAC yes 23797242
chr15 60840556 60840560 YY1 TRANSFAC yes 70534100
chr15 60840561 60840567 SP1 TRANSFAC yes 23797243
chr15 60840561 60840567 SP1 TRANSFAC yes 70534101
chr15 60840575 60840590 STAT2 JASPAR yes 23797244
chr15 60840575 60840590 STAT2 JASPAR yes 70534102
chr15 60840577 60840587 NFATC3 JASPAR yes 23797245
chr15 60840577 60840587 NFATC3 JASPAR yes 70534103
chr15 60840593 60840597 YY1 TRANSFAC yes 23797246
chr15 60840593 60840597 YY1 TRANSFAC yes 70534104
chr15 60840599 60840603 LFA1 TRANSFAC yes 23797247
chr15 60840599 60840603 LFA1 TRANSFAC yes 70534105
chr15 60840616 60840623 NFATC2 JASPAR yes 23797248
chr15 60840616 60840623 NFATC2 JASPAR yes 70534106
SNP sites on vista20186[chr15:60840388-60840646]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 60840568 rs28544431 C T
BATF PAX5 RUNX3
4000386
Genes possibly regulated by vista20186[chr15:60840388-60840646]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 60711808 60771359 - NARG2 ENSG00000128915.7 60771359 0.81 0.99 13991 30971
Expression level of Genes
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miRNAs possibly regulated by vista20186[chr15:60840388-60840646]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results