EnhancerDB
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  3. vista20218[chr15:61520020-61520614]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20218[chr15:61520020-61520614]
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Tissue distribution of vista20218
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Transcription factor that possibly regulate vista20218[chr15:61520020-61520614]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 61520020 61520032 PKNOX2 JASPAR yes 70535641
chr15 61520020 61520036 E2F2 JASPAR yes 70535642
chr15 61520032 61520048 POU4F3 JASPAR yes 70535643
chr15 61520034 61520048 POU4F1 JASPAR yes 70535644
chr15 61520035 61520049 POU4F1 JASPAR yes 70535645
chr15 61520035 61520051 POU4F3 JASPAR yes 70535646
chr15 61520038 61520042 YY1 TRANSFAC yes 70535647
chr15 61520041 61520045 YY1 TRANSFAC yes 70535648
chr15 61520041 61520051 HOXD11 JASPAR yes 70535649
chr15 61520050 61520058 HOXA5 JASPAR yes 70535650
chr15 61520051 61520061 EMX1 JASPAR yes 70535651
chr15 61520051 61520061 GBX2 JASPAR yes 70535652
chr15 61520051 61520061 GSX1 JASPAR yes 70535653
chr15 61520051 61520061 GSX2 JASPAR yes 70535654
chr15 61520051 61520061 HOXB2 JASPAR yes 70535655
chr15 61520051 61520061 HOXB3 JASPAR yes 70535656
chr15 61520051 61520061 MEOX1 JASPAR yes 70535657
chr15 61520051 61520061 MEOX2 JASPAR yes 70535658
chr15 61520051 61520061 MIXL1 JASPAR yes 70535659
chr15 61520051 61520061 MNX1 JASPAR yes 70535660
chr15 61520051 61520062 HOXA10 JASPAR yes 70535661
chr15 61520052 61520060 LMX1A JASPAR yes 70535662
chr15 61520052 61520060 LMX1B JASPAR yes 70535663
chr15 61520052 61520060 NKX6-1 JASPAR yes 70535664
chr15 61520052 61520060 NKX6-2 JASPAR yes 70535665
chr15 61520052 61520060 PDX1 JASPAR yes 70535666
chr15 61520052 61520060 VAX1 JASPAR yes 70535667
chr15 61520052 61520060 VAX2 JASPAR yes 70535668
chr15 61520052 61520060 VSX1 JASPAR yes 70535669
chr15 61520100 61520114 FOXF2 JASPAR yes 70535670
chr15 61520102 61520114 FOXC2 JASPAR yes 70535671
chr15 61520103 61520115 FOXI1 JASPAR yes 70535672
chr15 61520108 61520117 PITX3 JASPAR yes 70535673
chr15 61520108 61520118 GSC2 JASPAR yes 70535674
chr15 61520108 61520118 GSC JASPAR yes 70535675
chr15 61520109 61520117 RHOXF1 JASPAR yes 70535676
chr15 61520130 61520136 HiNF-A TRANSFAC yes 70535677
chr15 61520135 61520145 ETV3 JASPAR yes 70535678
chr15 61520146 61520150 H1TF2 TRANSFAC yes 70535679
chr15 61520146 61520150 NFE TRANSFAC yes 70535680
chr15 61520146 61520150 SRF TRANSFAC yes 70535681
chr15 61520196 61520207 E2F6 JASPAR yes 70535682
chr15 61520213 61520223 ZNF740 JASPAR yes 70535683
chr15 61520214 61520234 RREB1 JASPAR yes 70535684
chr15 61520215 61520229 PLAG1 JASPAR yes 70535685
chr15 61520215 61520235 RREB1 JASPAR yes 70535686
chr15 61520216 61520230 PLAG1 JASPAR yes 70535687
chr15 61520216 61520236 RREB1 JASPAR yes 70535688
chr15 61520217 61520227 SP1 JASPAR yes 70535689
chr15 61520217 61520237 RREB1 JASPAR yes 70535690
chr15 61520218 61520228 SP1 JASPAR yes 70535691
chr15 61520221 61520241 RREB1 JASPAR yes 70535692
chr15 61520222 61520232 ZNF740 JASPAR yes 70535693
chr15 61520223 61520233 ZNF740 JASPAR yes 70535694
chr15 61520224 61520244 RREB1 JASPAR yes 70535695
chr15 61520226 61520246 RREB1 JASPAR yes 70535696
chr15 61520241 61520261 RREB1 JASPAR yes 70535697
chr15 61520244 61520259 RUNX2 JASPAR yes 70535698
chr15 61520258 61520272 PAX6 JASPAR yes 70535699
chr15 61520292 61520310 IRF2 JASPAR yes 70535700
chr15 61520304 61520308 NFE TRANSFAC yes 70535701
chr15 61520305 61520310 GATA2 JASPAR yes 70535702
chr15 61520309 61520325 ZNF143 JASPAR yes 70535703
chr15 61520336 61520342 MZF1 JASPAR yes 70535704
chr15 61520351 61520357 HiNF-A TRANSFAC yes 70535705
chr15 61520370 61520381 E2F6 JASPAR yes 70535706
chr15 61520374 61520379 ETS2 TRANSFAC yes 70535707
chr15 61520430 61520440 ETV5 JASPAR yes 70535708
chr15 61520431 61520442 NRF1 JASPAR yes 70535709
chr15 61520462 61520467 SP1 TRANSFAC yes 70535710
chr15 61520480 61520491 NRF1 JASPAR yes 70535711
chr15 61520487 61520492 SP1 TRANSFAC yes 70535712
chr15 61520487 61520499 ZBTB7C JASPAR yes 70535713
chr15 61520488 61520500 TFAP2A JASPAR yes 70535714
chr15 61520488 61520502 GLIS2 JASPAR yes 70535715
chr15 61520492 61520498 SP1 TRANSFAC yes 70535716
chr15 61520586 61520593 SP1 TRANSFAC yes 70535717
chr15 61520588 61520593 SP1 TRANSFAC yes 70535718
chr15 61520588 61520597 THAP1 JASPAR yes 70535719
chr15 61520589 61520599 GCM2 JASPAR yes 70535720
chr15 61520597 61520607 SP1 JASPAR yes 70535721
chr15 61520599 61520610 FLI1 JASPAR yes 70535722
chr15 61520603 61520608 ETS2 TRANSFAC yes 70535723
SNP sites on vista20218[chr15:61520020-61520614]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 61520119 rs192693808 C T no 4005751
chr15 61520149 rs184674556 A C
H1TF2 NFE SRF
4005752
chr15 61520186 rs12901132 C T no 4005753
chr15 61520214 rs528816027 T TC
RREB1 ZNF740
4005754
chr15 61520223 rs569313643 T A
PLAG1 RREB1 SP1 ZNF740
4005755
chr15 61520405 rs12901465 C G no 4005756
chr15 61520435 rs12901753 G A
ETV5 NRF1
4005757
chr15 61520503 rs578139802 C T no 4005758
chr15 61520556 rs375648354 C T no 4005759
chr15 61520578 rs148205480 GA G no 4005760
Genes possibly regulated by vista20218[chr15:61520020-61520614]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 60780483 61521518 - RORA ENSG00000069667.11 61521518 0.85 0.98 13992 99096
Expression level of Genes
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miRNAs possibly regulated by vista20218[chr15:61520020-61520614]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results