EnhancerDB
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  3. vista20230[chr15:62405210-62405473]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20230[chr15:62405210-62405473]
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Tissue distribution of vista20230
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Transcription factor that possibly regulate vista20230[chr15:62405210-62405473]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 62405060 62405444 USF1 UCSC Txn Factor no Conserved 108142984
chr15 62405064 62405454 MAX UCSC Txn Factor no Conserved 108142986
chr15 62405079 62405479 MXI1 UCSC Txn Factor no Conserved 108142988
chr15 62405140 62405540 FOS UCSC Txn Factor no Conserved 108142995
chr15 62405163 62405494 NR3C1 UCSC Txn Factor no Conserved 108142999
chr15 62405238 62405253 TFAP2A JASPAR yes 23879581
chr15 62405238 62405253 TFAP2A JASPAR yes 70536048
chr15 62405248 62405258 MAX JASPAR yes 23879582
chr15 62405248 62405258 MAX JASPAR yes 70536049
chr15 62405248 62405259 USF1 JASPAR yes 23879583
chr15 62405248 62405259 USF1 JASPAR yes 70536050
chr15 62405248 62405260 HES5 JASPAR yes 23879584
chr15 62405248 62405260 HES5 JASPAR yes 70536051
chr15 62405249 62405259 CLOCK JASPAR yes 23879585
chr15 62405249 62405259 HEY1 JASPAR yes 23879586
chr15 62405249 62405259 HEY2 JASPAR yes 23879587
chr15 62405249 62405259 MAX JASPAR yes 23879588
chr15 62405249 62405259 MLXIPL JASPAR yes 23879589
chr15 62405249 62405259 MNT JASPAR yes 23879590
chr15 62405249 62405259 TFE3 JASPAR yes 23879591
chr15 62405249 62405259 TFEB JASPAR yes 23879592
chr15 62405249 62405259 CLOCK JASPAR yes 70536052
chr15 62405249 62405259 HEY1 JASPAR yes 70536053
chr15 62405249 62405259 HEY2 JASPAR yes 70536054
chr15 62405249 62405259 MAX JASPAR yes 70536055
chr15 62405249 62405259 MLXIPL JASPAR yes 70536056
chr15 62405249 62405259 MNT JASPAR yes 70536057
chr15 62405249 62405259 TFE3 JASPAR yes 70536058
chr15 62405249 62405259 TFEB JASPAR yes 70536059
chr15 62405250 62405260 MAX JASPAR yes 23879593
chr15 62405250 62405260 MAX JASPAR yes 70536060
chr15 62405251 62405256 MYC TRANSFAC yes 23879594
chr15 62405251 62405256 USF1 TRANSFAC yes 23879595
chr15 62405251 62405256 USF2 TRANSFAC yes 23879596
chr15 62405251 62405256 MYC TRANSFAC yes 70536061
chr15 62405251 62405256 USF1 TRANSFAC yes 70536062
chr15 62405251 62405256 USF2 TRANSFAC yes 70536063
chr15 62405251 62405258 USF1 JASPAR yes 23879597
chr15 62405251 62405258 USF1 JASPAR yes 70536064
chr15 62405284 62405304 ESR1 JASPAR yes 23879598
chr15 62405284 62405304 ESR1 JASPAR yes 70536065
chr15 62405286 62405297 FOS JASPAR yes 23879599
chr15 62405286 62405297 FOSL1 JASPAR yes 23879600
chr15 62405286 62405297 JUND JASPAR yes 23879601
chr15 62405286 62405297 FOS JASPAR yes 70536066
chr15 62405286 62405297 FOSL1 JASPAR yes 70536067
chr15 62405286 62405297 JUND JASPAR yes 70536068
chr15 62405287 62405298 FOSL2 JASPAR yes 23879602
chr15 62405287 62405298 JUNB JASPAR yes 23879603
chr15 62405287 62405298 FOSL2 JASPAR yes 70536069
chr15 62405287 62405298 JUNB JASPAR yes 70536070
chr15 62405287 62405301 JUN JASPAR yes 23879604
chr15 62405287 62405301 JUN JASPAR yes 70536071
chr15 62405287 62405305 ESR2 JASPAR yes 23879605
chr15 62405287 62405305 ESR2 JASPAR yes 70536072
chr15 62405289 62405304 ESR2 JASPAR yes 23879606
chr15 62405289 62405304 ESR2 JASPAR yes 70536073
chr15 62405306 62405326 TP63 JASPAR yes 23879607
chr15 62405306 62405326 TP63 JASPAR yes 70536074
chr15 62405320 62405337 NR3C1 JASPAR yes 23879608
chr15 62405320 62405337 NR3C2 JASPAR yes 23879609
chr15 62405320 62405337 NR3C1 JASPAR yes 70536075
chr15 62405320 62405337 NR3C2 JASPAR yes 70536076
chr15 62405322 62405337 AR JASPAR yes 23879610
chr15 62405322 62405337 AR JASPAR yes 70536077
chr15 62405338 62405348 SREBF2 JASPAR yes 23879611
chr15 62405338 62405348 SREBF2 JASPAR yes 70536078
chr15 62405339 62405354 JUND JASPAR yes 23879612
chr15 62405339 62405354 JUND JASPAR yes 70536079
chr15 62405340 62405353 JUN JASPAR yes 23879613
chr15 62405340 62405353 JUN JASPAR yes 70536080
chr15 62405342 62405357 JUND JASPAR yes 23879614
chr15 62405342 62405357 JUND JASPAR yes 70536081
chr15 62405350 62405354 YY1 TRANSFAC yes 23879615
chr15 62405350 62405354 YY1 TRANSFAC yes 70536082
chr15 62405366 62405370 NFE TRANSFAC yes 23879616
chr15 62405366 62405370 NFE TRANSFAC yes 70536083
chr15 62405375 62405385 EMX1 JASPAR yes 23879617
chr15 62405375 62405385 GBX2 JASPAR yes 23879618
chr15 62405375 62405385 GSX1 JASPAR yes 23879619
chr15 62405375 62405385 GSX2 JASPAR yes 23879620
chr15 62405375 62405385 HOXB2 JASPAR yes 23879621
chr15 62405375 62405385 HOXB3 JASPAR yes 23879622
chr15 62405375 62405385 MEOX1 JASPAR yes 23879623
chr15 62405375 62405385 MEOX2 JASPAR yes 23879624
chr15 62405375 62405385 MIXL1 JASPAR yes 23879625
chr15 62405375 62405385 MNX1 JASPAR yes 23879626
chr15 62405375 62405385 EMX1 JASPAR yes 70536084
chr15 62405375 62405385 GBX2 JASPAR yes 70536085
chr15 62405375 62405385 GSX1 JASPAR yes 70536086
chr15 62405375 62405385 GSX2 JASPAR yes 70536087
chr15 62405375 62405385 HOXB2 JASPAR yes 70536088
chr15 62405375 62405385 HOXB3 JASPAR yes 70536089
chr15 62405375 62405385 MEOX1 JASPAR yes 70536090
chr15 62405375 62405385 MEOX2 JASPAR yes 70536091
chr15 62405375 62405385 MIXL1 JASPAR yes 70536092
chr15 62405375 62405385 MNX1 JASPAR yes 70536093
chr15 62405375 62405386 HOXA10 JASPAR yes 23879627
chr15 62405375 62405386 HOXA10 JASPAR yes 70536094
chr15 62405376 62405384 LMX1A JASPAR yes 23879628
chr15 62405376 62405384 LMX1B JASPAR yes 23879629
chr15 62405376 62405384 NKX6-1 JASPAR yes 23879630
chr15 62405376 62405384 NKX6-2 JASPAR yes 23879631
chr15 62405376 62405384 PDX1 JASPAR yes 23879632
chr15 62405376 62405384 VAX1 JASPAR yes 23879633
chr15 62405376 62405384 VAX2 JASPAR yes 23879634
chr15 62405376 62405384 VSX1 JASPAR yes 23879635
chr15 62405376 62405384 LMX1A JASPAR yes 70536095
chr15 62405376 62405384 LMX1B JASPAR yes 70536096
chr15 62405376 62405384 NKX6-1 JASPAR yes 70536097
chr15 62405376 62405384 NKX6-2 JASPAR yes 70536098
chr15 62405376 62405384 PDX1 JASPAR yes 70536099
chr15 62405376 62405384 VAX1 JASPAR yes 70536100
chr15 62405376 62405384 VAX2 JASPAR yes 70536101
chr15 62405376 62405384 VSX1 JASPAR yes 70536102
chr15 62405376 62405390 NR2F1 JASPAR yes 23879636
chr15 62405376 62405390 NR2F1 JASPAR yes 70536103
chr15 62405395 62405401 ETS1 JASPAR yes 23879637
chr15 62405395 62405401 ETS1 JASPAR yes 70536104
chr15 62405413 62405433 RREB1 JASPAR yes 23879638
chr15 62405413 62405433 RREB1 JASPAR yes 70536105
chr15 62405418 62405422 YY1 TRANSFAC yes 23879639
chr15 62405418 62405422 YY1 TRANSFAC yes 70536106
chr15 62405421 62405424 MYB TRANSFAC yes 23879640
chr15 62405421 62405424 MYB TRANSFAC yes 70536107
chr15 62405439 62405460 REST JASPAR yes 23879641
chr15 62405439 62405460 REST JASPAR yes 70536108
chr15 62405441 62405445 NFE TRANSFAC yes 23879642
chr15 62405441 62405445 NFE TRANSFAC yes 70536109
chr15 62405446 62405464 MAFF JASPAR yes 23879643
chr15 62405446 62405464 MAFF JASPAR yes 70536110
chr15 62405447 62405462 MAFK JASPAR yes 23879644
chr15 62405447 62405462 MAFK JASPAR yes 70536111
chr15 62405450 62405454 ESR1 TRANSFAC yes 23879645
chr15 62405450 62405454 ESR1 TRANSFAC yes 70536112
chr15 62405461 62405465 NFE TRANSFAC yes 23879646
chr15 62405461 62405465 NFE TRANSFAC yes 70536113
SNP sites on vista20230[chr15:62405210-62405473]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 62405255 rs17205498 G A
CLOCK FOS HES5 HEY1 HEY2 MAX MLXIPL MNT MXI1 MYC NR3C1 TFE3 TFEB USF1 USF2
4008645
chr15 62405258 rs563649298 G T
CLOCK FOS HES5 HEY1 HEY2 MAX MLXIPL MNT MXI1 NR3C1 TFE3 TFEB USF1
4008646
chr15 62405462 rs79164468 C T
FOS MAFF MAFK MXI1 NFE NR3C1
4008647
chr15 62405472 rs148146496 G A
FOS MXI1 NR3C1
4008648
Genes possibly regulated by vista20230[chr15:62405210-62405473]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 62144588 62352672 - VPS13C ENSG00000129003.11 62352672 0.78 0.98 13993 47462
chr15 62359176 62363116 + C2CD4A ENSG00000198535.5 62359176 0.92 0.93 13994 53966
chr15 62455734 62457482 - C2CD4B ENSG00000205502.3 62457482 0.96 1.0 13995 47991
Expression level of Genes
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miRNAs possibly regulated by vista20230[chr15:62405210-62405473]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results