EnhancerDB
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  3. vista20234[chr15:62416624-62416992]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20234[chr15:62416624-62416992]
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Tissue distribution of vista20234
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Transcription factor that possibly regulate vista20234[chr15:62416624-62416992]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 62416596 62416888 TCF12 UCSC Txn Factor no Conserved 108143076
chr15 62416617 62416887 FOXA1 UCSC Txn Factor no Conserved 108143079
chr15 62416623 62416883 FOSL2 UCSC Txn Factor no Conserved 108143082
chr15 62416613 62416625 IRF1 JASPAR yes 23881435
chr15 62416613 62416625 IRF1 JASPAR yes 70536267
chr15 62416621 62416626 ETS2 TRANSFAC yes 23881436
chr15 62416621 62416626 ETS2 TRANSFAC yes 70536268
chr15 62416626 62416634 FOXO3 JASPAR yes 23881437
chr15 62416626 62416634 FOXO3 JASPAR yes 70536269
chr15 62416627 62416642 FOXP1 JASPAR yes 23881438
chr15 62416627 62416642 FOXP1 JASPAR yes 70536270
chr15 62416629 62416649 RREB1 JASPAR yes 23881439
chr15 62416629 62416649 RREB1 JASPAR yes 70536271
chr15 62416632 62416644 IRF1 JASPAR yes 23881440
chr15 62416632 62416644 IRF1 JASPAR yes 70536272
chr15 62416632 62416647 FOXP1 JASPAR yes 23881441
chr15 62416632 62416647 FOXP1 JASPAR yes 70536273
chr15 62416634 62416654 RREB1 JASPAR yes 23881442
chr15 62416634 62416654 RREB1 JASPAR yes 70536274
chr15 62416641 62416647 SOX10 JASPAR yes 23881443
chr15 62416641 62416647 SOX10 JASPAR yes 70536275
chr15 62416667 62416682 FOXP1 JASPAR yes 23881444
chr15 62416667 62416682 FOXP1 JASPAR yes 70536276
chr15 62416667 62416688 IRF1 JASPAR yes 23881445
chr15 62416667 62416688 IRF1 JASPAR yes 70536277
chr15 62416687 62416697 TFAP4 JASPAR yes 23881446
chr15 62416687 62416697 TFAP4 JASPAR yes 70536278
chr15 62416694 62416705 ETV2 JASPAR yes 23881447
chr15 62416694 62416705 ETV2 JASPAR yes 70536279
chr15 62416695 62416705 ERF JASPAR yes 23881448
chr15 62416695 62416705 ERG JASPAR yes 23881449
chr15 62416695 62416705 ETS1 JASPAR yes 23881450
chr15 62416695 62416705 FLI1 JASPAR yes 23881451
chr15 62416695 62416705 ERF JASPAR yes 70536280
chr15 62416695 62416705 ERG JASPAR yes 70536281
chr15 62416695 62416705 ETS1 JASPAR yes 70536282
chr15 62416695 62416705 FLI1 JASPAR yes 70536283
chr15 62416695 62416706 FLI1 JASPAR yes 23881452
chr15 62416695 62416706 FLI1 JASPAR yes 70536284
chr15 62416696 62416704 FEV JASPAR yes 23881453
chr15 62416696 62416704 FEV JASPAR yes 70536285
chr15 62416740 62416752 TEF JASPAR yes 23881454
chr15 62416740 62416752 TEF JASPAR yes 70536286
chr15 62416743 62416750 NKX3-1 JASPAR yes 23881455
chr15 62416743 62416750 NKX3-1 JASPAR yes 70536287
chr15 62416744 62416759 HNF4G JASPAR yes 23881456
chr15 62416744 62416759 HNF4G JASPAR yes 70536288
chr15 62416745 62416760 HNF4A JASPAR yes 23881457
chr15 62416745 62416760 HNF4A JASPAR yes 70536289
chr15 62416747 62416750 MYB TRANSFAC yes 23881458
chr15 62416747 62416750 MYB TRANSFAC yes 70536290
chr15 62416749 62416755 SOX10 JASPAR yes 23881459
chr15 62416749 62416755 SOX10 JASPAR yes 70536291
chr15 62416754 62416758 LFA1 TRANSFAC yes 23881460
chr15 62416754 62416758 LFA1 TRANSFAC yes 70536292
chr15 62416777 62416788 JUND JASPAR yes 23881461
chr15 62416777 62416788 JUND JASPAR yes 70536293
chr15 62416778 62416789 FOSL2 JASPAR yes 23881462
chr15 62416778 62416789 JUNB JASPAR yes 23881463
chr15 62416778 62416789 FOSL2 JASPAR yes 70536294
chr15 62416778 62416789 JUNB JASPAR yes 70536295
chr15 62416779 62416785 JUN TRANSFAC yes 23881464
chr15 62416779 62416785 JUN TRANSFAC yes 70536296
chr15 62416794 62416805 NRL JASPAR yes 23881465
chr15 62416794 62416805 NRL JASPAR yes 70536297
chr15 62416808 62416819 FOXH1 JASPAR yes 23881466
chr15 62416808 62416819 FOXH1 JASPAR yes 70536298
chr15 62416811 62416824 ZBTB18 JASPAR yes 23881467
chr15 62416811 62416824 ZBTB18 JASPAR yes 70536299
chr15 62416812 62416822 MAX JASPAR yes 23881468
chr15 62416812 62416822 MAX JASPAR yes 70536300
chr15 62416813 62416823 CLOCK JASPAR yes 23881469
chr15 62416813 62416823 CLOCK JASPAR yes 70536301
chr15 62416834 62416848 XBP1 JASPAR yes 23881470
chr15 62416834 62416848 XBP1 JASPAR yes 70536302
chr15 62416835 62416849 CREB3 JASPAR yes 23881471
chr15 62416835 62416849 CREB3L1 JASPAR yes 23881472
chr15 62416835 62416849 CREB3 JASPAR yes 70536303
chr15 62416835 62416849 CREB3L1 JASPAR yes 70536304
chr15 62416847 62416851 YY1 TRANSFAC yes 23881473
chr15 62416847 62416851 YY1 TRANSFAC yes 70536305
chr15 62416885 62416889 YY1 TRANSFAC yes 23881474
chr15 62416885 62416889 YY1 TRANSFAC yes 70536306
chr15 62416888 62416900 POU2F1 JASPAR yes 23881475
chr15 62416888 62416900 POU2F1 JASPAR yes 70536307
chr15 62416888 62416901 POU3F3 JASPAR yes 23881476
chr15 62416888 62416901 POU3F3 JASPAR yes 70536308
chr15 62416888 62416902 POU1F1 JASPAR yes 23881477
chr15 62416888 62416902 POU1F1 JASPAR yes 70536309
chr15 62416889 62416901 POU3F1 JASPAR yes 23881478
chr15 62416889 62416901 POU3F2 JASPAR yes 23881479
chr15 62416889 62416901 POU3F1 JASPAR yes 70536310
chr15 62416889 62416901 POU3F2 JASPAR yes 70536311
chr15 62416889 62416902 POU2F2 JASPAR yes 23881480
chr15 62416889 62416902 POU2F2 JASPAR yes 70536312
chr15 62416890 62416898 FOXL1 JASPAR yes 23881481
chr15 62416890 62416898 FOXL1 JASPAR yes 70536313
chr15 62416890 62416899 POU5F1B JASPAR yes 23881482
chr15 62416890 62416899 POU5F1B JASPAR yes 70536314
chr15 62416895 62416916 IRF1 JASPAR yes 23881483
chr15 62416895 62416916 IRF1 JASPAR yes 70536315
chr15 62416899 62416913 SPIC JASPAR yes 23881484
chr15 62416899 62416913 SPIC JASPAR yes 70536316
chr15 62416900 62416913 ELF1 JASPAR yes 23881485
chr15 62416900 62416913 ELF1 JASPAR yes 70536317
chr15 62416901 62416913 EHF JASPAR yes 23881486
chr15 62416901 62416913 ELF1 JASPAR yes 23881487
chr15 62416901 62416913 EHF JASPAR yes 70536318
chr15 62416901 62416913 ELF1 JASPAR yes 70536319
chr15 62416901 62416914 ELF3 JASPAR yes 23881488
chr15 62416901 62416914 ELF3 JASPAR yes 70536320
chr15 62416902 62416913 ELF5 JASPAR yes 23881489
chr15 62416902 62416913 ETV2 JASPAR yes 23881490
chr15 62416902 62416913 ELF5 JASPAR yes 70536321
chr15 62416902 62416913 ETV2 JASPAR yes 70536322
chr15 62416903 62416913 ERF JASPAR yes 23881491
chr15 62416903 62416913 ERG JASPAR yes 23881492
chr15 62416903 62416913 ETS1 JASPAR yes 23881493
chr15 62416903 62416913 FLI1 JASPAR yes 23881494
chr15 62416903 62416913 ERF JASPAR yes 70536323
chr15 62416903 62416913 ERG JASPAR yes 70536324
chr15 62416903 62416913 ETS1 JASPAR yes 70536325
chr15 62416903 62416913 FLI1 JASPAR yes 70536326
chr15 62416903 62416914 FLI1 JASPAR yes 23881495
chr15 62416903 62416914 FLI1 JASPAR yes 70536327
chr15 62416904 62416912 FEV JASPAR yes 23881496
chr15 62416904 62416912 FEV JASPAR yes 70536328
chr15 62416947 62416950 MYB TRANSFAC yes 23881497
chr15 62416947 62416950 MYB TRANSFAC yes 70536329
chr15 62416963 62416969 GATA3 JASPAR yes 23881498
chr15 62416963 62416969 GATA3 JASPAR yes 70536330
chr15 62416971 62416975 ESR1 TRANSFAC yes 23881499
chr15 62416971 62416975 ESR1 TRANSFAC yes 70536331
chr15 62416972 62416983 NRL JASPAR yes 23881500
chr15 62416972 62416983 NRL JASPAR yes 70536332
chr15 62416977 62416992 PRDM1 JASPAR yes 23881501
chr15 62416977 62416992 PRDM1 JASPAR yes 70536333
chr15 62416986 62416990 NFE TRANSFAC yes 23881502
chr15 62416986 62416990 NFE TRANSFAC yes 70536334
SNP sites on vista20234[chr15:62416624-62416992]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 62416662 rs115243778 T A
FOSL2 FOXA1 TCF12
4008800
chr15 62416918 rs116087950 A T no 4008801
chr15 62416947 rs79530586 C G
MYB
4008802
chr15 62416959 rs17271493 C A no 4008803
chr15 62416970 rs137928756 G T no 4008804
chr15 62416978 rs143382680 C T
NRL PRDM1
4008805
Genes possibly regulated by vista20234[chr15:62416624-62416992]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 62144588 62352672 - VPS13C ENSG00000129003.11 62352672 0.78 0.98 13993 36048
chr15 62359176 62363116 + C2CD4A ENSG00000198535.5 62359176 0.92 0.93 13994 42552
chr15 62455734 62457482 - C2CD4B ENSG00000205502.3 62457482 0.96 1.0 13995 59510
Expression level of Genes
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miRNAs possibly regulated by vista20234[chr15:62416624-62416992]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results