EnhancerDB
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  3. vista20236[chr15:62499952-62500233]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20236[chr15:62499952-62500233]
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Tissue distribution of vista20236
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Transcription factor that possibly regulate vista20236[chr15:62499952-62500233]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 62499955 62499973 ESR1 JASPAR yes 23886445
chr15 62499955 62499973 ESR1 JASPAR yes 70536372
chr15 62499982 62499986 NFE TRANSFAC yes 23886446
chr15 62499982 62499986 NFE TRANSFAC yes 70536373
chr15 62500002 62500017 NFYB JASPAR yes 23886447
chr15 62500002 62500017 NFYB JASPAR yes 70536374
chr15 62500004 62500020 NFYA JASPAR yes 23886448
chr15 62500004 62500020 NFYA JASPAR yes 70536375
chr15 62500005 62500023 NFYA JASPAR yes 23886449
chr15 62500005 62500023 NFYA JASPAR yes 70536376
chr15 62500009 62500013 H1TF2 TRANSFAC yes 23886450
chr15 62500009 62500013 NFE TRANSFAC yes 23886451
chr15 62500009 62500013 SRF TRANSFAC yes 23886452
chr15 62500009 62500013 H1TF2 TRANSFAC yes 70536377
chr15 62500009 62500013 NFE TRANSFAC yes 70536378
chr15 62500009 62500013 SRF TRANSFAC yes 70536379
chr15 62500023 62500027 NFE TRANSFAC yes 23886453
chr15 62500023 62500027 NFE TRANSFAC yes 70536380
chr15 62500043 62500058 NFYB JASPAR yes 23886454
chr15 62500043 62500058 NFYB JASPAR yes 70536381
chr15 62500045 62500061 NFYA JASPAR yes 23886455
chr15 62500045 62500061 NFYA JASPAR yes 70536382
chr15 62500046 62500064 NFYA JASPAR yes 23886456
chr15 62500046 62500064 NFYA JASPAR yes 70536383
chr15 62500050 62500054 H1TF2 TRANSFAC yes 23886457
chr15 62500050 62500054 NFE TRANSFAC yes 23886458
chr15 62500050 62500054 SRF TRANSFAC yes 23886459
chr15 62500050 62500054 H1TF2 TRANSFAC yes 70536384
chr15 62500050 62500054 NFE TRANSFAC yes 70536385
chr15 62500050 62500054 SRF TRANSFAC yes 70536386
chr15 62500084 62500099 NFYB JASPAR yes 23886460
chr15 62500084 62500099 NFYB JASPAR yes 70536387
chr15 62500086 62500102 NFYA JASPAR yes 23886461
chr15 62500086 62500102 NFYA JASPAR yes 70536388
chr15 62500087 62500105 NFYA JASPAR yes 23886462
chr15 62500087 62500105 NFYA JASPAR yes 70536389
chr15 62500090 62500105 MAFK JASPAR yes 23886463
chr15 62500090 62500105 MAFK JASPAR yes 70536390
chr15 62500091 62500095 H1TF2 TRANSFAC yes 23886464
chr15 62500091 62500095 NFE TRANSFAC yes 23886465
chr15 62500091 62500095 SRF TRANSFAC yes 23886466
chr15 62500091 62500095 H1TF2 TRANSFAC yes 70536391
chr15 62500091 62500095 NFE TRANSFAC yes 70536392
chr15 62500091 62500095 SRF TRANSFAC yes 70536393
chr15 62500102 62500110 MEIS2 JASPAR yes 23886467
chr15 62500102 62500110 MEIS2 JASPAR yes 70536394
chr15 62500103 62500107 NFE TRANSFAC yes 23886468
chr15 62500103 62500107 NFE TRANSFAC yes 70536395
chr15 62500103 62500110 MEIS1 JASPAR yes 23886469
chr15 62500103 62500110 MEIS1 JASPAR yes 70536396
chr15 62500107 62500119 YY1 JASPAR yes 23886470
chr15 62500107 62500119 YY1 JASPAR yes 70536397
chr15 62500109 62500124 NFYB JASPAR yes 23886471
chr15 62500109 62500124 NFYB JASPAR yes 70536398
chr15 62500111 62500127 NFYA JASPAR yes 23886472
chr15 62500111 62500127 NFYA JASPAR yes 70536399
chr15 62500112 62500130 NFYA JASPAR yes 23886473
chr15 62500112 62500130 NFYA JASPAR yes 70536400
chr15 62500116 62500120 H1TF2 TRANSFAC yes 23886474
chr15 62500116 62500120 NFE TRANSFAC yes 23886475
chr15 62500116 62500120 SRF TRANSFAC yes 23886476
chr15 62500116 62500120 H1TF2 TRANSFAC yes 70536401
chr15 62500116 62500120 NFE TRANSFAC yes 70536402
chr15 62500116 62500120 SRF TRANSFAC yes 70536403
chr15 62500133 62500148 NFYB JASPAR yes 23886477
chr15 62500133 62500148 NFYB JASPAR yes 70536404
chr15 62500135 62500151 NFYA JASPAR yes 23886478
chr15 62500135 62500151 NFYA JASPAR yes 70536405
chr15 62500136 62500154 NFYA JASPAR yes 23886479
chr15 62500136 62500154 NFYA JASPAR yes 70536406
chr15 62500140 62500144 H1TF2 TRANSFAC yes 23886480
chr15 62500140 62500144 NFE TRANSFAC yes 23886481
chr15 62500140 62500144 SRF TRANSFAC yes 23886482
chr15 62500140 62500144 H1TF2 TRANSFAC yes 70536407
chr15 62500140 62500144 NFE TRANSFAC yes 70536408
chr15 62500140 62500144 SRF TRANSFAC yes 70536409
chr15 62500157 62500172 NFYB JASPAR yes 23886483
chr15 62500157 62500172 NFYB JASPAR yes 70536410
chr15 62500159 62500175 NFYA JASPAR yes 23886484
chr15 62500159 62500175 NFYA JASPAR yes 70536411
chr15 62500160 62500178 NFYA JASPAR yes 23886485
chr15 62500160 62500178 NFYA JASPAR yes 70536412
chr15 62500162 62500180 MAFF JASPAR yes 23886486
chr15 62500162 62500180 MAFF JASPAR yes 70536413
chr15 62500164 62500168 H1TF2 TRANSFAC yes 23886487
chr15 62500164 62500168 NFE TRANSFAC yes 23886488
chr15 62500164 62500168 SRF TRANSFAC yes 23886489
chr15 62500164 62500168 H1TF2 TRANSFAC yes 70536414
chr15 62500164 62500168 NFE TRANSFAC yes 70536415
chr15 62500164 62500168 SRF TRANSFAC yes 70536416
chr15 62500170 62500181 SPDEF JASPAR yes 23886490
chr15 62500170 62500181 SPDEF JASPAR yes 70536417
chr15 62500171 62500182 FLI1 JASPAR yes 23886491
chr15 62500171 62500182 FLI1 JASPAR yes 70536418
chr15 62500172 62500179 PEA3 TRANSFAC yes 23886492
chr15 62500172 62500179 PEA3 TRANSFAC yes 70536419
chr15 62500175 62500185 GCM2 JASPAR yes 23886493
chr15 62500175 62500185 GCM2 JASPAR yes 70536420
chr15 62500178 62500188 SP1 JASPAR yes 23886494
chr15 62500178 62500188 SP1 JASPAR yes 70536421
chr15 62500181 62500186 SP1 TRANSFAC yes 23886495
chr15 62500181 62500186 SP1 TRANSFAC yes 70536422
chr15 62500183 62500201 SRF JASPAR yes 23886496
chr15 62500183 62500201 SRF JASPAR yes 70536423
chr15 62500184 62500189 SP1 TRANSFAC yes 23886497
chr15 62500184 62500189 SP1 TRANSFAC yes 70536424
chr15 62500185 62500201 SRF JASPAR yes 23886498
chr15 62500185 62500201 SRF JASPAR yes 70536425
chr15 62500190 62500198 GATA3 JASPAR yes 23886499
chr15 62500190 62500198 GATA5 JASPAR yes 23886500
chr15 62500190 62500198 GATA3 JASPAR yes 70536426
chr15 62500190 62500198 GATA5 JASPAR yes 70536427
chr15 62500212 62500224 INSM1 JASPAR yes 23886501
chr15 62500212 62500224 INSM1 JASPAR yes 70536428
chr15 62500212 62500226 GLIS2 JASPAR yes 23886502
chr15 62500212 62500226 GLIS3 JASPAR yes 23886503
chr15 62500212 62500226 GLIS2 JASPAR yes 70536429
chr15 62500212 62500226 GLIS3 JASPAR yes 70536430
chr15 62500222 62500238 SOX4 JASPAR yes 23886504
chr15 62500222 62500238 SOX4 JASPAR yes 70536431
chr15 62500223 62500238 SOX21 JASPAR yes 23886505
chr15 62500223 62500238 SOX21 JASPAR yes 70536432
SNP sites on vista20236[chr15:62499952-62500233]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 62499966 rs28578202 C A,T
ESR1
4009325
chr15 62500059 rs190166875 C T
NFYA
4009326
chr15 62500085 rs138691451 A G
NFYB
4009327
chr15 62500102 rs149437470 C G
MAFK MEIS2 NFYA
4009328
chr15 62500214 rs142992025 AC A
GLIS2 GLIS3 INSM1
4009329
chr15 62500214 rs546224351 A AC
GLIS2 GLIS3 INSM1
4009330
chr15 62500214 rs771944454 AC A
GLIS2 GLIS3 INSM1
4009331
chr15 62500214 rs780439477 A AC
GLIS2 GLIS3 INSM1
4009332
chr15 62500232 rs368619122 C G,T
SOX21 SOX4
4009333
Genes possibly regulated by vista20236[chr15:62499952-62500233]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 62455734 62457482 - C2CD4B ENSG00000205502.3 62457482 0.96 1.0 13995 57530
Expression level of Genes
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miRNAs possibly regulated by vista20236[chr15:62499952-62500233]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results