EnhancerDB
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  3. vista20243[chr15:62896766-62896914]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20243[chr15:62896766-62896914]
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Tissue distribution of vista20243
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Transcription factor that possibly regulate vista20243[chr15:62896766-62896914]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 62896790 62896805 PRDM1 JASPAR yes 23915984
chr15 62896790 62896805 PRDM1 JASPAR yes 70536853
chr15 62896818 62896838 RREB1 JASPAR yes 23915985
chr15 62896818 62896838 RREB1 JASPAR yes 70536854
chr15 62896822 62896842 RREB1 JASPAR yes 23915986
chr15 62896822 62896842 RREB1 JASPAR yes 70536855
chr15 62896823 62896835 ZBTB7B JASPAR yes 23915987
chr15 62896823 62896835 ZBTB7C JASPAR yes 23915988
chr15 62896823 62896835 ZBTB7B JASPAR yes 70536856
chr15 62896823 62896835 ZBTB7C JASPAR yes 70536857
chr15 62896824 62896836 ZBTB7A JASPAR yes 23915989
chr15 62896824 62896836 ZBTB7A JASPAR yes 70536858
chr15 62896847 62896868 ZNF263 JASPAR yes 23915990
chr15 62896847 62896868 ZNF263 JASPAR yes 70536859
chr15 62896850 62896871 ZNF263 JASPAR yes 23915991
chr15 62896850 62896871 ZNF263 JASPAR yes 70536860
chr15 62896859 62896874 STAT2 JASPAR yes 23915992
chr15 62896859 62896874 STAT2 JASPAR yes 70536861
chr15 62896862 62896872 NFATC3 JASPAR yes 23915993
chr15 62896862 62896872 NFATC3 JASPAR yes 70536862
chr15 62896870 62896876 ZNF354C JASPAR yes 23915994
chr15 62896870 62896876 ZNF354C JASPAR yes 70536863
chr15 62896873 62896878 H4TF1 TRANSFAC yes 23915995
chr15 62896873 62896878 H4TF1 TRANSFAC yes 70536864
chr15 62896876 62896897 ZNF263 JASPAR yes 23915996
chr15 62896876 62896897 ZNF263 JASPAR yes 70536865
chr15 62896884 62896905 IRF1 JASPAR yes 23915997
chr15 62896884 62896905 IRF1 JASPAR yes 70536866
chr15 62896887 62896908 IRF1 JASPAR yes 23915998
chr15 62896887 62896908 IRF1 JASPAR yes 70536867
chr15 62896888 62896909 IRF1 JASPAR yes 23915999
chr15 62896888 62896909 IRF1 JASPAR yes 70536868
chr15 62896889 62896910 IRF1 JASPAR yes 23916000
chr15 62896889 62896910 IRF1 JASPAR yes 70536869
chr15 62896890 62896905 FOXP1 JASPAR yes 23916001
chr15 62896890 62896905 FOXP1 JASPAR yes 70536870
chr15 62896892 62896907 FOXP1 JASPAR yes 23916002
chr15 62896892 62896907 FOXP1 JASPAR yes 70536871
chr15 62896893 62896908 FOXP1 JASPAR yes 23916003
chr15 62896893 62896908 FOXP1 JASPAR yes 70536872
chr15 62896893 62896914 IRF1 JASPAR yes 23916004
chr15 62896893 62896914 IRF1 JASPAR yes 70536873
chr15 62896894 62896909 FOXP1 JASPAR yes 23916005
chr15 62896894 62896909 FOXP1 JASPAR yes 70536874
chr15 62896895 62896910 FOXP1 JASPAR yes 23916006
chr15 62896895 62896910 FOXP1 JASPAR yes 70536875
chr15 62896896 62896911 FOXP1 JASPAR yes 23916007
chr15 62896896 62896911 FOXP1 JASPAR yes 70536876
chr15 62896897 62896912 FOXP1 JASPAR yes 23916008
chr15 62896897 62896912 FOXP1 JASPAR yes 70536877
chr15 62896905 62896916 HOXA10 JASPAR yes 23916009
chr15 62896905 62896916 HOXA10 JASPAR yes 70536878
chr15 62896906 62896916 GSX2 JASPAR yes 23916010
chr15 62896906 62896916 HOXB2 JASPAR yes 23916011
chr15 62896906 62896916 HOXB3 JASPAR yes 23916012
chr15 62896906 62896916 MNX1 JASPAR yes 23916013
chr15 62896906 62896916 POU6F1 JASPAR yes 23916014
chr15 62896906 62896916 GSX2 JASPAR yes 70536879
chr15 62896906 62896916 HOXB2 JASPAR yes 70536880
chr15 62896906 62896916 HOXB3 JASPAR yes 70536881
chr15 62896906 62896916 MNX1 JASPAR yes 70536882
chr15 62896906 62896916 POU6F1 JASPAR yes 70536883
chr15 62896907 62896915 LMX1A JASPAR yes 23916015
chr15 62896907 62896915 LMX1B JASPAR yes 23916016
chr15 62896907 62896915 NKX6-1 JASPAR yes 23916017
chr15 62896907 62896915 NKX6-2 JASPAR yes 23916018
chr15 62896907 62896915 VAX1 JASPAR yes 23916019
chr15 62896907 62896915 VAX2 JASPAR yes 23916020
chr15 62896907 62896915 VSX1 JASPAR yes 23916021
chr15 62896907 62896915 VSX2 JASPAR yes 23916022
chr15 62896907 62896915 LMX1A JASPAR yes 70536884
chr15 62896907 62896915 LMX1B JASPAR yes 70536885
chr15 62896907 62896915 NKX6-1 JASPAR yes 70536886
chr15 62896907 62896915 NKX6-2 JASPAR yes 70536887
chr15 62896907 62896915 VAX1 JASPAR yes 70536888
chr15 62896907 62896915 VAX2 JASPAR yes 70536889
chr15 62896907 62896915 VSX1 JASPAR yes 70536890
chr15 62896907 62896915 VSX2 JASPAR yes 70536891
chr15 62896912 62896916 YY1 TRANSFAC yes 23916023
chr15 62896912 62896916 YY1 TRANSFAC yes 70536892
SNP sites on vista20243[chr15:62896766-62896914]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 62896799 rs12437894 A G
PRDM1
4012384
chr15 62896820 rs116527274 G C
RREB1
4012385
chr15 62896823 rs543154095 T C
RREB1 ZBTB7B ZBTB7C
4012386
chr15 62896872 rs28444660 T C
NFATC3 STAT2 ZNF354C
4012387
chr15 62896873 rs72755811 G A
H4TF1 STAT2 ZNF354C
4012388
chr15 62896893 rs533702168 CT C
FOXP1 IRF1 ZNF263
4012389
chr15 62896893 rs59233796 CT C
FOXP1 IRF1 ZNF263
4012390
chr15 62896894 rs28665823 T C
FOXP1 IRF1 ZNF263
4012391
chr15 62896909 rs11071677 T A
FOXP1 GSX2 HOXA10 HOXB2 HOXB3 IRF1 LMX1A LMX1B MNX1 NKX6-1 NKX6-2 POU6F1 VAX1 VAX2 VSX1 VSX2
4012392
Genes possibly regulated by vista20243[chr15:62896766-62896914]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 62929371 62937490 - RP11-625H11.1 ENSG00000259458.1 62937490 0.96 0.95 13997 59424
Expression level of Genes
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miRNAs possibly regulated by vista20243[chr15:62896766-62896914]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results