EnhancerDB
  1. Home
  2. Enhancers
  3. vista20272[chr15:63767138-63767451]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20272[chr15:63767138-63767451]
Back to top
Tissue distribution of vista20272
Back to top
Transcription factor that possibly regulate vista20272[chr15:63767138-63767451]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 63765378 63767595 POLR2A UCSC Txn Factor no Conserved 108144000
chr15 63765378 63767595 POLR2A UCSC Txn Factor no Conserved 108144001
chr15 63765378 63767595 POLR2A UCSC Txn Factor no Conserved 108144002
chr15 63766321 63767418 EP300 UCSC Txn Factor no Conserved 108144047
chr15 63766321 63767418 EP300 UCSC Txn Factor no Conserved 108144048
chr15 63767017 63767329 RUNX3 UCSC Txn Factor no Conserved 108144060
chr15 63767041 63767334 SPI1 UCSC Txn Factor no Conserved 108144064
chr15 63767070 63767370 PAX5 UCSC Txn Factor no Conserved 108144071
chr15 63767133 63767149 SOX8 JASPAR yes 23980790
chr15 63767133 63767149 SOX8 JASPAR yes 70538126
chr15 63767139 63767143 ESR1 TRANSFAC yes 23980791
chr15 63767139 63767143 ESR1 TRANSFAC yes 70538127
chr15 63767148 63767153 TFAP2A TRANSFAC yes 23980792
chr15 63767148 63767153 TFAP2A TRANSFAC yes 70538128
chr15 63767148 63767154 MZF1 JASPAR yes 23980793
chr15 63767148 63767154 MZF1 JASPAR yes 70538129
chr15 63767150 63767155 ETS2 TRANSFAC yes 23980794
chr15 63767150 63767155 ETS2 TRANSFAC yes 70538130
chr15 63767177 63767189 ELF4 JASPAR yes 23980795
chr15 63767177 63767189 ELF4 JASPAR yes 70538131
chr15 63767181 63767201 RREB1 JASPAR yes 23980796
chr15 63767181 63767201 RREB1 JASPAR yes 70538132
chr15 63767182 63767196 GLIS3 JASPAR yes 23980797
chr15 63767182 63767196 GLIS3 JASPAR yes 70538133
chr15 63767196 63767202 PEA3 TRANSFAC yes 23980798
chr15 63767196 63767202 PEA3 TRANSFAC yes 70538134
chr15 63767212 63767226 RXRB JASPAR yes 23980799
chr15 63767212 63767226 RXRG JASPAR yes 23980800
chr15 63767212 63767226 RXRB JASPAR yes 70538135
chr15 63767212 63767226 RXRG JASPAR yes 70538136
chr15 63767214 63767218 ESR1 TRANSFAC yes 23980801
chr15 63767214 63767218 ESR1 TRANSFAC yes 70538137
chr15 63767214 63767231 PAX1 JASPAR yes 23980802
chr15 63767214 63767231 PAX9 JASPAR yes 23980803
chr15 63767214 63767231 PAX1 JASPAR yes 70538138
chr15 63767214 63767231 PAX9 JASPAR yes 70538139
chr15 63767215 63767229 PAX6 JASPAR yes 23980804
chr15 63767215 63767229 PAX6 JASPAR yes 70538140
chr15 63767215 63767234 PAX5 JASPAR yes 23980805
chr15 63767215 63767234 PAX5 JASPAR yes 70538141
chr15 63767236 63767245 SNAI2 JASPAR yes 23980806
chr15 63767236 63767245 SNAI2 JASPAR yes 70538142
chr15 63767236 63767246 TCF3 JASPAR yes 23980807
chr15 63767236 63767246 TCF4 JASPAR yes 23980808
chr15 63767236 63767246 TCF3 JASPAR yes 70538143
chr15 63767236 63767246 TCF4 JASPAR yes 70538144
chr15 63767238 63767247 ZEB1 JASPAR yes 23980809
chr15 63767238 63767247 ZEB1 JASPAR yes 70538145
chr15 63767239 63767247 TBX15 JASPAR yes 23980810
chr15 63767239 63767247 TBX15 JASPAR yes 70538146
chr15 63767240 63767245 SP1 TRANSFAC yes 23980811
chr15 63767240 63767245 SP1 TRANSFAC yes 70538147
chr15 63767271 63767274 MYB TRANSFAC yes 23980812
chr15 63767271 63767274 MYB TRANSFAC yes 70538148
chr15 63767275 63767285 MSC JASPAR yes 23980813
chr15 63767275 63767285 MSC JASPAR yes 70538149
chr15 63767287 63767307 TP63 JASPAR yes 23980814
chr15 63767287 63767307 TP63 JASPAR yes 70538150
chr15 63767288 63767306 TP73 JASPAR yes 23980815
chr15 63767288 63767306 TP73 JASPAR yes 70538151
chr15 63767289 63767304 TP53 JASPAR yes 23980816
chr15 63767289 63767304 TP53 JASPAR yes 70538152
chr15 63767290 63767305 TP53 JASPAR yes 23980817
chr15 63767290 63767305 TP53 JASPAR yes 70538153
chr15 63767292 63767296 ESR1 TRANSFAC yes 23980818
chr15 63767292 63767296 ESR1 TRANSFAC yes 70538154
chr15 63767323 63767328 ETS2 TRANSFAC yes 23980819
chr15 63767323 63767328 ETS2 TRANSFAC yes 70538155
chr15 63767331 63767350 PAX5 JASPAR yes 23980820
chr15 63767331 63767350 PAX5 JASPAR yes 70538156
chr15 63767334 63767347 SMAD2 JASPAR yes 23980821
chr15 63767334 63767347 SMAD2 JASPAR yes 70538157
chr15 63767346 63767351 SP1 TRANSFAC yes 23980822
chr15 63767346 63767351 SP1 TRANSFAC yes 70538158
chr15 63767388 63767400 PKNOX2 JASPAR yes 23980823
chr15 63767388 63767400 PKNOX2 JASPAR yes 70538159
chr15 63767389 63767399 ID4 JASPAR yes 23980824
chr15 63767389 63767399 TCF4 JASPAR yes 23980825
chr15 63767389 63767399 ID4 JASPAR yes 70538160
chr15 63767389 63767399 TCF4 JASPAR yes 70538161
chr15 63767392 63767405 SMAD2 JASPAR yes 23980826
chr15 63767392 63767405 SMAD2 JASPAR yes 70538162
chr15 63767401 63767412 E2F4 JASPAR yes 23980827
chr15 63767401 63767412 E2F6 JASPAR yes 23980828
chr15 63767401 63767412 E2F4 JASPAR yes 70538163
chr15 63767401 63767412 E2F6 JASPAR yes 70538164
chr15 63767402 63767413 E2F1 JASPAR yes 23980829
chr15 63767402 63767413 E2F1 JASPAR yes 70538165
chr15 63767406 63767411 SP1 TRANSFAC yes 23980830
chr15 63767406 63767411 SP1 TRANSFAC yes 70538166
chr15 63767407 63767420 ZBTB18 JASPAR yes 23980831
chr15 63767407 63767420 ZBTB18 JASPAR yes 70538167
chr15 63767409 63767419 ID4 JASPAR yes 23980832
chr15 63767409 63767419 TCF3 JASPAR yes 23980833
chr15 63767409 63767419 TCF4 JASPAR yes 23980834
chr15 63767409 63767419 ID4 JASPAR yes 70538168
chr15 63767409 63767419 TCF3 JASPAR yes 70538169
chr15 63767409 63767419 TCF4 JASPAR yes 70538170
chr15 63767411 63767420 ZEB1 JASPAR yes 23980835
chr15 63767411 63767420 ZEB1 JASPAR yes 70538171
chr15 63767412 63767420 TBX5 JASPAR yes 23980836
chr15 63767412 63767420 TBX5 JASPAR yes 70538172
SNP sites on vista20272[chr15:63767138-63767451]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 63767223 rs148557563 T C
EP300 PAX1 PAX5 PAX6 PAX9 POLR2A RUNX3 RXRB RXRG SPI1
4020118
chr15 63767263 rs187423348 T C
EP300 PAX5 POLR2A RUNX3 SPI1
4020119
chr15 63767377 rs72748999 G A,T
EP300 POLR2A
4020120
Genes possibly regulated by vista20272[chr15:63767138-63767451]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 63613577 63674360 - CA12 ENSG00000074410.9 63674360 0.96 0.89 14003 7222
chr15 63796793 63886839 + USP3 ENSG00000140455.12 63796793 0.73 1.0 14004 70658
Expression level of Genes
Back to top
miRNAs possibly regulated by vista20272[chr15:63767138-63767451]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results