EnhancerDB
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  3. vista20296[chr15:64060591-64060833]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20296[chr15:64060591-64060833]
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Tissue distribution of vista20296
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Transcription factor that possibly regulate vista20296[chr15:64060591-64060833]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 64060589 64060604 HNF4G JASPAR yes 23994057
chr15 64060589 64060604 HNF4G JASPAR yes 70539447
chr15 64060590 64060604 NR2F1 JASPAR yes 23994058
chr15 64060590 64060604 NR2F1 JASPAR yes 70539448
chr15 64060590 64060605 HNF4A JASPAR yes 23994059
chr15 64060590 64060605 HNF4A JASPAR yes 70539449
chr15 64060608 64060617 ZEB1 JASPAR yes 23994060
chr15 64060608 64060617 ZEB1 JASPAR yes 70539450
chr15 64060631 64060640 NKX3-2 JASPAR yes 23994061
chr15 64060631 64060640 NKX3-2 JASPAR yes 70539451
chr15 64060644 64060654 HMBOX1 JASPAR yes 23994062
chr15 64060644 64060654 HMBOX1 JASPAR yes 70539452
chr15 64060646 64060649 MYB TRANSFAC yes 23994063
chr15 64060646 64060649 MYB TRANSFAC yes 70539453
chr15 64060657 64060665 FOXL1 JASPAR yes 23994064
chr15 64060657 64060665 FOXL1 JASPAR yes 70539454
chr15 64060670 64060686 RFX2 JASPAR yes 23994065
chr15 64060670 64060686 RFX3 JASPAR yes 23994066
chr15 64060670 64060686 RFX4 JASPAR yes 23994067
chr15 64060670 64060686 RFX5 JASPAR yes 23994068
chr15 64060670 64060686 RFX2 JASPAR yes 70539455
chr15 64060670 64060686 RFX3 JASPAR yes 70539456
chr15 64060670 64060686 RFX4 JASPAR yes 70539457
chr15 64060670 64060686 RFX5 JASPAR yes 70539458
chr15 64060671 64060690 RFX2 JASPAR yes 23994069
chr15 64060671 64060690 RFX2 JASPAR yes 70539459
chr15 64060714 64060724 HMBOX1 JASPAR yes 23994070
chr15 64060714 64060724 HMBOX1 JASPAR yes 70539460
chr15 64060731 64060735 YY1 TRANSFAC yes 23994071
chr15 64060731 64060735 YY1 TRANSFAC yes 70539461
chr15 64060731 64060746 STAT1 JASPAR yes 23994072
chr15 64060731 64060746 STAT1 JASPAR yes 70539462
chr15 64060733 64060744 STAT1 JASPAR yes 23994073
chr15 64060733 64060744 STAT3 JASPAR yes 23994074
chr15 64060733 64060744 STAT1 JASPAR yes 70539463
chr15 64060733 64060744 STAT3 JASPAR yes 70539464
chr15 64060754 64060769 RUNX2 JASPAR yes 23994075
chr15 64060754 64060769 RUNX2 JASPAR yes 70539465
chr15 64060768 64060776 GATA5 JASPAR yes 23994076
chr15 64060768 64060776 GATA5 JASPAR yes 70539466
chr15 64060796 64060810 IRF7 JASPAR yes 23994077
chr15 64060796 64060810 IRF7 JASPAR yes 70539467
chr15 64060796 64060811 IRF9 JASPAR yes 23994078
chr15 64060796 64060811 IRF9 JASPAR yes 70539468
chr15 64060798 64060810 IRF1 JASPAR yes 23994079
chr15 64060798 64060810 IRF1 JASPAR yes 70539469
chr15 64060805 64060817 GRHL1 JASPAR yes 23994080
chr15 64060805 64060817 GRHL1 JASPAR yes 70539470
chr15 64060809 64060818 ZEB1 JASPAR yes 23994081
chr15 64060809 64060818 ZEB1 JASPAR yes 70539471
SNP sites on vista20296[chr15:64060591-64060833]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 64060626 rs552401075 C A no 4021431
chr15 64060695 rs143258169 G A no 4021432
chr15 64060710 rs80204188 A C no 4021433
Genes possibly regulated by vista20296[chr15:64060591-64060833]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 63900817 64126141 - HERC1 ENSG00000103657.9 64126141 0.74 0.98 14006 34692
Expression level of Genes
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miRNAs possibly regulated by vista20296[chr15:64060591-64060833]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results