EnhancerDB
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  3. vista20298[chr15:64151144-64151340]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20298[chr15:64151144-64151340]
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Tissue distribution of vista20298
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Transcription factor that possibly regulate vista20298[chr15:64151144-64151340]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 64151140 64151150 CLOCK JASPAR yes 24001248
chr15 64151140 64151150 HEY1 JASPAR yes 24001249
chr15 64151140 64151150 CLOCK JASPAR yes 70539568
chr15 64151140 64151150 HEY1 JASPAR yes 70539569
chr15 64151142 64151147 MYC TRANSFAC yes 24001250
chr15 64151142 64151147 USF1 TRANSFAC yes 24001251
chr15 64151142 64151147 USF2 TRANSFAC yes 24001252
chr15 64151142 64151147 MYC TRANSFAC yes 70539570
chr15 64151142 64151147 USF1 TRANSFAC yes 70539571
chr15 64151142 64151147 USF2 TRANSFAC yes 70539572
chr15 64151143 64151151 MGA JASPAR yes 24001253
chr15 64151143 64151151 TBX1 JASPAR yes 24001254
chr15 64151143 64151151 MGA JASPAR yes 70539573
chr15 64151143 64151151 TBX1 JASPAR yes 70539574
chr15 64151143 64151156 SMAD2 JASPAR yes 24001255
chr15 64151143 64151156 SMAD2 JASPAR yes 70539575
chr15 64151147 64151158 FOSL2 JASPAR yes 24001256
chr15 64151147 64151158 FOSL2 JASPAR yes 70539576
chr15 64151167 64151177 HOXB13 JASPAR yes 24001257
chr15 64151167 64151177 HOXB13 JASPAR yes 70539577
chr15 64151171 64151175 YY1 TRANSFAC yes 24001258
chr15 64151171 64151175 YY1 TRANSFAC yes 70539578
chr15 64151176 64151180 ESR1 TRANSFAC yes 24001259
chr15 64151176 64151180 ESR1 TRANSFAC yes 70539579
chr15 64151184 64151204 RREB1 JASPAR yes 24001260
chr15 64151184 64151204 RREB1 JASPAR yes 70539580
chr15 64151196 64151215 RFX2 JASPAR yes 24001261
chr15 64151196 64151215 RFX2 JASPAR yes 70539581
chr15 64151198 64151213 RFX5 JASPAR yes 24001262
chr15 64151198 64151213 RFX5 JASPAR yes 70539582
chr15 64151200 64151216 RFX2 JASPAR yes 24001263
chr15 64151200 64151216 RFX3 JASPAR yes 24001264
chr15 64151200 64151216 RFX4 JASPAR yes 24001265
chr15 64151200 64151216 RFX5 JASPAR yes 24001266
chr15 64151200 64151216 RFX2 JASPAR yes 70539583
chr15 64151200 64151216 RFX3 JASPAR yes 70539584
chr15 64151200 64151216 RFX4 JASPAR yes 70539585
chr15 64151200 64151216 RFX5 JASPAR yes 70539586
chr15 64151234 64151249 STAT2 JASPAR yes 24001267
chr15 64151234 64151249 STAT2 JASPAR yes 70539587
chr15 64151235 64151249 STAT1 JASPAR yes 24001268
chr15 64151235 64151249 STAT1 JASPAR yes 70539588
chr15 64151236 64151247 ETV2 JASPAR yes 24001269
chr15 64151236 64151247 ETV2 JASPAR yes 70539589
chr15 64151250 64151261 PROP1 JASPAR yes 24001270
chr15 64151250 64151261 PROP1 JASPAR yes 70539590
chr15 64151251 64151261 PAX7 JASPAR yes 24001271
chr15 64151251 64151261 PAX7 JASPAR yes 70539591
chr15 64151278 64151287 SRY JASPAR yes 24001272
chr15 64151278 64151287 SRY JASPAR yes 70539592
chr15 64151291 64151302 CDX2 JASPAR yes 24001273
chr15 64151291 64151302 CDX2 JASPAR yes 70539593
chr15 64151310 64151323 NR2F1 JASPAR yes 24001274
chr15 64151310 64151323 NR2F1 JASPAR yes 70539594
chr15 64151311 64151326 NR2C2 JASPAR yes 24001275
chr15 64151311 64151326 NR2C2 JASPAR yes 70539595
chr15 64151314 64151318 ESR1 TRANSFAC yes 24001276
chr15 64151314 64151318 ESR1 TRANSFAC yes 70539596
SNP sites on vista20298[chr15:64151144-64151340]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 64151145 rs117134081 C T
CLOCK HEY1 MGA MYC SMAD2 TBX1 USF1 USF2
4022184
chr15 64151163 rs7181366 T C no 4022185
chr15 64151196 rs189565607 G A
RFX2 RREB1
4022186
chr15 64151245 rs117263549 G C
ETV2 STAT1 STAT2
4022187
chr15 64151288 rs557223305 A G no 4022188
Genes possibly regulated by vista20298[chr15:64151144-64151340]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 63900817 64126141 - HERC1 ENSG00000103657.9 64126141 0.74 0.98 14006 74997
Expression level of Genes
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miRNAs possibly regulated by vista20298[chr15:64151144-64151340]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results