EnhancerDB
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  3. vista20338[chr15:65135268-65135743]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20338[chr15:65135268-65135743]
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Tissue distribution of vista20338
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Transcription factor that possibly regulate vista20338[chr15:65135268-65135743]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 65133139 65135623 POLR2A UCSC Txn Factor no Conserved 108145999
chr15 65135309 65135515 SPI1 UCSC Txn Factor no Conserved 108146008
chr15 65135248 65135269 REST JASPAR yes 24069105
chr15 65135248 65135269 REST JASPAR yes 70541499
chr15 65135249 65135268 REST JASPAR yes 24069106
chr15 65135249 65135268 REST JASPAR yes 70541500
chr15 65135266 65135277 NFKB1 JASPAR yes 24069108
chr15 65135266 65135277 NFKB1 JASPAR yes 70541501
chr15 65135267 65135272 ETS2 TRANSFAC yes 24069109
chr15 65135267 65135272 ETS2 TRANSFAC yes 70541502
chr15 65135306 65135315 HIC2 JASPAR yes 24069110
chr15 65135306 65135315 HIC2 JASPAR yes 70541503
chr15 65135321 65135328 NFATC2 JASPAR yes 24069111
chr15 65135321 65135328 NFATC2 JASPAR yes 70541504
chr15 65135324 65135345 REST JASPAR yes 24069112
chr15 65135324 65135345 REST JASPAR yes 70541505
chr15 65135325 65135344 REST JASPAR yes 24069113
chr15 65135325 65135344 REST JASPAR yes 70541506
chr15 65135335 65135340 GATA2 JASPAR yes 24069114
chr15 65135335 65135340 GATA2 JASPAR yes 70541507
chr15 65135352 65135356 H4TF2 TRANSFAC yes 24069115
chr15 65135352 65135356 H4TF2 TRANSFAC yes 70541508
chr15 65135409 65135430 ZNF263 JASPAR yes 24069116
chr15 65135409 65135430 ZNF263 JASPAR yes 70541509
chr15 65135410 65135420 ETV6 JASPAR yes 24069117
chr15 65135410 65135420 ETV6 JASPAR yes 70541510
chr15 65135413 65135434 ZNF263 JASPAR yes 24069118
chr15 65135413 65135434 ZNF263 JASPAR yes 70541511
chr15 65135428 65135439 FLI1 JASPAR yes 24069119
chr15 65135428 65135439 FLI1 JASPAR yes 70541512
chr15 65135429 65135433 YY1 TRANSFAC yes 24069120
chr15 65135429 65135433 YY1 TRANSFAC yes 70541513
chr15 65135429 65135439 ETV6 JASPAR yes 24069121
chr15 65135429 65135439 ETV6 JASPAR yes 70541514
chr15 65135429 65135440 ETV2 JASPAR yes 24069122
chr15 65135429 65135440 ETV2 JASPAR yes 70541515
chr15 65135429 65135442 ELF1 JASPAR yes 24069123
chr15 65135429 65135442 ELF1 JASPAR yes 70541516
chr15 65135430 65135438 FEV JASPAR yes 24069124
chr15 65135430 65135438 FEV JASPAR yes 70541517
chr15 65135432 65135439 SPIB JASPAR yes 24069125
chr15 65135432 65135439 SPIB JASPAR yes 70541518
chr15 65135456 65135460 NFE TRANSFAC yes 24069126
chr15 65135456 65135460 NFE TRANSFAC yes 70541519
chr15 65135473 65135483 SREBF2 JASPAR yes 24069127
chr15 65135473 65135483 SREBF2 JASPAR yes 70541520
chr15 65135508 65135520 INSM1 JASPAR yes 24069128
chr15 65135508 65135520 INSM1 JASPAR yes 70541521
chr15 65135515 65135519 LFA1 TRANSFAC yes 24069129
chr15 65135515 65135519 LFA1 TRANSFAC yes 70541522
chr15 65135540 65135550 RUNX3 JASPAR yes 24069130
chr15 65135540 65135550 RUNX3 JASPAR yes 70541523
chr15 65135541 65135550 RUNX2 JASPAR yes 24069131
chr15 65135541 65135550 RUNX2 JASPAR yes 70541524
chr15 65135564 65135569 SP1 TRANSFAC yes 24069132
chr15 65135564 65135569 SP1 TRANSFAC yes 70541525
chr15 65135569 65135588 CTCF JASPAR yes 24069133
chr15 65135569 65135588 CTCF JASPAR yes 70541526
chr15 65135572 65135589 RXRA JASPAR yes 24069134
chr15 65135572 65135589 RXRA JASPAR yes 70541527
chr15 65135573 65135579 YY1 JASPAR yes 24069135
chr15 65135573 65135579 YY1 JASPAR yes 70541528
chr15 65135580 65135595 TFAP2A JASPAR yes 24069136
chr15 65135580 65135595 TFAP2C JASPAR yes 24069137
chr15 65135580 65135595 TFAP2A JASPAR yes 70541529
chr15 65135580 65135595 TFAP2C JASPAR yes 70541530
chr15 65135582 65135588 NFE2 TRANSFAC yes 24069138
chr15 65135582 65135588 NFE2 TRANSFAC yes 70541531
chr15 65135582 65135594 INSM1 JASPAR yes 24069139
chr15 65135582 65135594 INSM1 JASPAR yes 70541532
chr15 65135583 65135594 TFAP2A JASPAR yes 24069140
chr15 65135583 65135594 TFAP2B JASPAR yes 24069141
chr15 65135583 65135594 TFAP2C JASPAR yes 24069142
chr15 65135583 65135594 TFAP2A JASPAR yes 70541533
chr15 65135583 65135594 TFAP2B JASPAR yes 70541534
chr15 65135583 65135594 TFAP2C JASPAR yes 70541535
chr15 65135583 65135595 TFAP2A JASPAR yes 24069143
chr15 65135583 65135595 TFAP2A JASPAR yes 70541536
chr15 65135584 65135593 TFAP2A JASPAR yes 24069144
chr15 65135584 65135593 TFAP2A JASPAR yes 70541537
chr15 65135608 65135627 REST JASPAR yes 24069145
chr15 65135608 65135627 REST JASPAR yes 70541538
chr15 65135626 65135632 SP1 TRANSFAC yes 24069146
chr15 65135626 65135632 SP1 TRANSFAC yes 70541539
chr15 65135626 65135636 SP1 JASPAR yes 24069147
chr15 65135626 65135636 SP1 JASPAR yes 70541540
chr15 65135643 65135650 PEA3 TRANSFAC yes 24069148
chr15 65135643 65135650 PEA3 TRANSFAC yes 70541541
chr15 65135644 65135658 RORA JASPAR yes 24069149
chr15 65135644 65135658 RORA JASPAR yes 70541542
chr15 65135647 65135657 RORA JASPAR yes 24069150
chr15 65135647 65135657 RORA JASPAR yes 70541543
chr15 65135649 65135669 PPARG JASPAR yes 24069151
chr15 65135649 65135669 PPARG JASPAR yes 70541544
chr15 65135650 65135656 ESR1 TRANSFAC yes 24069152
chr15 65135650 65135656 ESR1 TRANSFAC yes 70541545
chr15 65135652 65135656 ESR1 TRANSFAC yes 24069153
chr15 65135652 65135656 ESR1 TRANSFAC yes 70541546
chr15 65135697 65135702 ETS2 TRANSFAC yes 24069154
chr15 65135697 65135702 ETS2 TRANSFAC yes 70541547
chr15 65135701 65135721 TP53 JASPAR yes 24069155
chr15 65135701 65135721 TP53 JASPAR yes 70541548
SNP sites on vista20338[chr15:65135268-65135743]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 65135325 rs1684036 T C
NFATC2 POLR2A REST SPI1
4028283
chr15 65135354 rs35590693 G T
H4TF2 POLR2A SPI1
4028284
chr15 65135540 rs9672652 T A
POLR2A RUNX3
4028285
chr15 65135582 rs190297815 C T
CTCF INSM1 NFE2 POLR2A RXRA TFAP2A TFAP2C
4028286
chr15 65135710 rs533895384 G A
TP53
4028287
Genes possibly regulated by vista20338[chr15:65135268-65135743]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 65032091 65067786 - RBPMS2 ENSG00000166831.4 65067786 0.88 1.0 14018 32518
chr15 65107831 65117867 - PIF1 ENSG00000140451.8 65117867 0.89 1.0 14019 82599
chr15 65134082 65223118 + AC069368.3 ENSG00000249240.2 65134082 0.94 0.89 14020 98814
chr15 65134088 65160206 + PLEKHO2 ENSG00000241839.5 65134088 0.89 1.0 14021 98820
chr15 65204101 65251042 + ANKDD1A ENSG00000166839.12 65204101 0.84 1.0 14022 31642
Expression level of Genes
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miRNAs possibly regulated by vista20338[chr15:65135268-65135743]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results