EnhancerDB
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  3. vista20341[chr15:65165332-65165600]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20341[chr15:65165332-65165600]
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Tissue distribution of vista20341
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Transcription factor that possibly regulate vista20341[chr15:65165332-65165600]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 65165253 65165483 SRF UCSC Txn Factor no Conserved 108146015
chr15 65165318 65165336 ESR1 JASPAR yes 24071721
chr15 65165318 65165336 ESR1 JASPAR yes 70541589
chr15 65165351 65165362 NFKB1 JASPAR yes 24071722
chr15 65165351 65165362 NFKB1 JASPAR yes 70541590
chr15 65165352 65165362 NFKB1 JASPAR yes 24071723
chr15 65165352 65165362 NFKB1 JASPAR yes 70541591
chr15 65165352 65165367 PRDM1 JASPAR yes 24071724
chr15 65165352 65165367 PRDM1 JASPAR yes 70541592
chr15 65165355 65165373 SRF JASPAR yes 24071725
chr15 65165355 65165373 SRF JASPAR yes 70541593
chr15 65165357 65165373 SRF JASPAR yes 24071726
chr15 65165357 65165373 SRF JASPAR yes 70541594
chr15 65165357 65165375 SRF JASPAR yes 24071727
chr15 65165357 65165375 SRF JASPAR yes 70541595
chr15 65165358 65165370 SRF JASPAR yes 24071728
chr15 65165358 65165370 SRF JASPAR yes 70541596
chr15 65165360 65165372 SRF JASPAR yes 24071729
chr15 65165360 65165372 SRF JASPAR yes 70541597
chr15 65165363 65165367 TEAD2 TRANSFAC yes 24071730
chr15 65165363 65165367 TEAD2 TRANSFAC yes 70541598
chr15 65165376 65165388 NHLH1 JASPAR yes 24071731
chr15 65165376 65165388 NHLH1 JASPAR yes 70541599
chr15 65165377 65165387 NHLH1 JASPAR yes 24071732
chr15 65165377 65165387 TFAP4 JASPAR yes 24071733
chr15 65165377 65165387 NHLH1 JASPAR yes 70541600
chr15 65165377 65165387 TFAP4 JASPAR yes 70541601
chr15 65165410 65165415 TFAP2A TRANSFAC yes 24071734
chr15 65165410 65165415 TFAP2A TRANSFAC yes 70541602
chr15 65165410 65165416 MZF1 JASPAR yes 24071735
chr15 65165410 65165416 MZF1 JASPAR yes 70541603
chr15 65165410 65165431 ZNF263 JASPAR yes 24071736
chr15 65165410 65165431 ZNF263 JASPAR yes 70541604
chr15 65165413 65165434 ZNF263 JASPAR yes 24071737
chr15 65165413 65165434 ZNF263 JASPAR yes 70541605
chr15 65165414 65165425 E2F1 JASPAR yes 24071738
chr15 65165414 65165425 E2F1 JASPAR yes 70541606
chr15 65165415 65165420 SP1 TRANSFAC yes 24071739
chr15 65165415 65165420 SP1 TRANSFAC yes 70541607
chr15 65165415 65165426 E2F4 JASPAR yes 24071740
chr15 65165415 65165426 E2F6 JASPAR yes 24071741
chr15 65165415 65165426 E2F4 JASPAR yes 70541608
chr15 65165415 65165426 E2F6 JASPAR yes 70541609
chr15 65165416 65165421 SP1 TRANSFAC yes 24071742
chr15 65165416 65165421 SP1 TRANSFAC yes 70541610
chr15 65165419 65165429 SP1 JASPAR yes 24071743
chr15 65165419 65165429 SP1 JASPAR yes 70541611
chr15 65165439 65165453 NR2F1 JASPAR yes 24071744
chr15 65165439 65165453 NR2F1 JASPAR yes 70541612
chr15 65165448 65165466 MAFF JASPAR yes 24071745
chr15 65165448 65165466 MAFF JASPAR yes 70541613
chr15 65165450 65165465 MAFK JASPAR yes 24071746
chr15 65165450 65165465 MAFK JASPAR yes 70541614
chr15 65165451 65165461 TFAP4 JASPAR yes 24071747
chr15 65165451 65165461 TFAP4 JASPAR yes 70541615
chr15 65165480 65165489 THAP1 JASPAR yes 24071748
chr15 65165480 65165489 THAP1 JASPAR yes 70541616
chr15 65165510 65165527 ZNF410 JASPAR yes 24071749
chr15 65165510 65165527 ZNF410 JASPAR yes 70541617
chr15 65165512 65165522 HOXA13 JASPAR yes 24071750
chr15 65165512 65165522 HOXB13 JASPAR yes 24071751
chr15 65165512 65165522 HOXD13 JASPAR yes 24071752
chr15 65165512 65165522 HOXA13 JASPAR yes 70541618
chr15 65165512 65165522 HOXB13 JASPAR yes 70541619
chr15 65165512 65165522 HOXD13 JASPAR yes 70541620
chr15 65165513 65165522 CDX1 JASPAR yes 24071753
chr15 65165513 65165522 CDX1 JASPAR yes 70541621
chr15 65165513 65165524 CDX2 JASPAR yes 24071754
chr15 65165513 65165524 CDX2 JASPAR yes 70541622
chr15 65165520 65165530 SP1 JASPAR yes 24071755
chr15 65165520 65165530 SP1 JASPAR yes 70541623
chr15 65165521 65165528 CEBPA TRANSFAC yes 24071756
chr15 65165521 65165528 CEBPA TRANSFAC yes 70541624
chr15 65165525 65165538 SMAD2 JASPAR yes 24071757
chr15 65165525 65165538 SMAD2 JASPAR yes 70541625
chr15 65165526 65165531 SP1 TRANSFAC yes 24071758
chr15 65165526 65165531 SP1 TRANSFAC yes 70541626
chr15 65165550 65165560 ZNF740 JASPAR yes 24071759
chr15 65165550 65165560 ZNF740 JASPAR yes 70541627
chr15 65165569 65165574 ETS2 TRANSFAC yes 24071760
chr15 65165569 65165574 ETS2 TRANSFAC yes 70541628
chr15 65165586 65165600 PLAG1 JASPAR yes 24071761
chr15 65165586 65165600 PLAG1 JASPAR yes 70541629
SNP sites on vista20341[chr15:65165332-65165600]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 65165339 rs115414776 G A
SRF
4028555
chr15 65165355 rs527955092 ACTTTCC A
NFKB1 PRDM1 SRF
4028556
chr15 65165359 rs184284902 T C
NFKB1 PRDM1 SRF
4028557
chr15 65165366 rs28538700 T A
PRDM1 SRF TEAD2
4028558
chr15 65165378 rs144088622 C G
NHLH1 SRF TFAP4
4028559
chr15 65165408 rs145015338 A G
SRF
4028560
chr15 65165436 rs2037517 C T
SRF
4028561
chr15 65165444 rs554746521 C G
NR2F1 SRF
4028562
chr15 65165459 rs4776639 G A
MAFF MAFK SRF TFAP4
4028563
chr15 65165554 rs531191504 G A,C
ZNF740
4028564
chr15 65165570 rs114041222 G C
ETS2
4028565
Genes possibly regulated by vista20341[chr15:65165332-65165600]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 65032091 65067786 - RBPMS2 ENSG00000166831.4 65067786 0.88 1.0 14018 2454
chr15 65107831 65117867 - PIF1 ENSG00000140451.8 65117867 0.89 1.0 14019 52535
chr15 65134082 65223118 + AC069368.3 ENSG00000249240.2 65134082 0.94 0.89 14020 68750
chr15 65134088 65160206 + PLEKHO2 ENSG00000241839.5 65134088 0.89 1.0 14021 68756
chr15 65204101 65251042 + ANKDD1A ENSG00000166839.12 65204101 0.84 1.0 14022 61499
Expression level of Genes
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miRNAs possibly regulated by vista20341[chr15:65165332-65165600]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results