EnhancerDB
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  3. vista20348[chr15:65187630-65188212]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20348[chr15:65187630-65188212]
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Tissue distribution of vista20348
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Transcription factor that possibly regulate vista20348[chr15:65187630-65188212]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 65184414 65188302 POLR2A UCSC Txn Factor no Conserved 108146379
chr15 65184414 65188302 POLR2A UCSC Txn Factor no Conserved 108146380
chr15 65184414 65188302 POLR2A UCSC Txn Factor no Conserved 108146381
chr15 65184414 65188302 POLR2A UCSC Txn Factor no Conserved 108146382
chr15 65187553 65187940 CTCF UCSC Txn Factor no Conserved 108146668
chr15 65187645 65187905 POU2F2 UCSC Txn Factor no Conserved 108146675
chr15 65187714 65188216 RELA UCSC Txn Factor no Conserved 108146679
chr15 65187905 65188261 IRF1 UCSC Txn Factor no Conserved 108146683
chr15 65187619 65187633 RORA JASPAR yes 24074805
chr15 65187619 65187633 RORA JASPAR yes 70542067
chr15 65187640 65187660 RREB1 JASPAR yes 24074807
chr15 65187640 65187660 RREB1 JASPAR yes 70542068
chr15 65187650 65187662 TFAP2A JASPAR yes 24074808
chr15 65187650 65187662 TFAP2B JASPAR yes 24074809
chr15 65187650 65187662 TFAP2C JASPAR yes 24074810
chr15 65187650 65187662 TFAP2A JASPAR yes 70542069
chr15 65187650 65187662 TFAP2B JASPAR yes 70542070
chr15 65187650 65187662 TFAP2C JASPAR yes 70542071
chr15 65187650 65187665 TFAP2A JASPAR yes 24074811
chr15 65187650 65187665 TFAP2A JASPAR yes 70542072
chr15 65187658 65187673 STAT1 JASPAR yes 24074812
chr15 65187658 65187673 STAT1 JASPAR yes 70542073
chr15 65187690 65187704 RXRB JASPAR yes 24074813
chr15 65187690 65187704 RXRG JASPAR yes 24074814
chr15 65187690 65187704 RXRB JASPAR yes 70542074
chr15 65187690 65187704 RXRG JASPAR yes 70542075
chr15 65187690 65187705 NR2C2 JASPAR yes 24074815
chr15 65187690 65187705 NR2C2 JASPAR yes 70542076
chr15 65187697 65187700 MYB TRANSFAC yes 24074816
chr15 65187697 65187700 MYB TRANSFAC yes 70542077
chr15 65187713 65187728 AR JASPAR yes 24074817
chr15 65187713 65187728 AR JASPAR yes 70542078
chr15 65187723 65187728 ETS2 TRANSFAC yes 24074818
chr15 65187723 65187728 ETS2 TRANSFAC yes 70542079
chr15 65187744 65187756 PKNOX1 JASPAR yes 24074819
chr15 65187744 65187756 PKNOX2 JASPAR yes 24074820
chr15 65187744 65187756 TGIF1 JASPAR yes 24074821
chr15 65187744 65187756 TGIF2 JASPAR yes 24074822
chr15 65187744 65187756 PKNOX1 JASPAR yes 70542080
chr15 65187744 65187756 PKNOX2 JASPAR yes 70542081
chr15 65187744 65187756 TGIF1 JASPAR yes 70542082
chr15 65187744 65187756 TGIF2 JASPAR yes 70542083
chr15 65187745 65187751 YY1 JASPAR yes 24074823
chr15 65187745 65187751 YY1 JASPAR yes 70542084
chr15 65187745 65187755 NEUROG2 JASPAR yes 24074824
chr15 65187745 65187755 NEUROG2 JASPAR yes 70542085
chr15 65187750 65187754 NFE TRANSFAC yes 24074825
chr15 65187750 65187754 NFE TRANSFAC yes 70542086
chr15 65187766 65187776 HOXA13 JASPAR yes 24074826
chr15 65187766 65187776 HOXB13 JASPAR yes 24074827
chr15 65187766 65187776 HOXD13 JASPAR yes 24074828
chr15 65187766 65187776 HOXA13 JASPAR yes 70542087
chr15 65187766 65187776 HOXB13 JASPAR yes 70542088
chr15 65187766 65187776 HOXD13 JASPAR yes 70542089
chr15 65187767 65187779 FOXI1 JASPAR yes 24074829
chr15 65187767 65187779 FOXI1 JASPAR yes 70542090
chr15 65187771 65187784 POU3F3 JASPAR yes 24074830
chr15 65187771 65187784 POU3F3 JASPAR yes 70542091
chr15 65187772 65187784 POU2F1 JASPAR yes 24074831
chr15 65187772 65187784 POU2F1 JASPAR yes 70542092
chr15 65187772 65187785 POU3F3 JASPAR yes 24074832
chr15 65187772 65187785 POU3F3 JASPAR yes 70542093
chr15 65187772 65187786 POU1F1 JASPAR yes 24074833
chr15 65187772 65187786 POU1F1 JASPAR yes 70542094
chr15 65187773 65187785 POU3F1 JASPAR yes 24074834
chr15 65187773 65187785 POU3F2 JASPAR yes 24074835
chr15 65187773 65187785 POU3F1 JASPAR yes 70542095
chr15 65187773 65187785 POU3F2 JASPAR yes 70542096
chr15 65187773 65187786 POU2F2 JASPAR yes 24074836
chr15 65187773 65187786 POU2F2 JASPAR yes 70542097
chr15 65187774 65187782 POU2F1 TRANSFAC yes 24074837
chr15 65187774 65187782 POU2F1 TRANSFAC yes 70542098
chr15 65187774 65187783 POU3F4 JASPAR yes 24074838
chr15 65187774 65187783 POU5F1B JASPAR yes 24074839
chr15 65187774 65187783 POU3F4 JASPAR yes 70542099
chr15 65187774 65187783 POU5F1B JASPAR yes 70542100
chr15 65187775 65187782 POU2F1 TRANSFAC yes 24074840
chr15 65187775 65187782 POU2F2 TRANSFAC yes 24074841
chr15 65187775 65187782 POU2F1 TRANSFAC yes 70542101
chr15 65187775 65187782 POU2F2 TRANSFAC yes 70542102
chr15 65187824 65187828 LFA1 TRANSFAC yes 24074842
chr15 65187824 65187828 LFA1 TRANSFAC yes 70542103
chr15 65187829 65187841 POU3F2 JASPAR yes 24074843
chr15 65187829 65187841 POU3F2 JASPAR yes 70542104
chr15 65187829 65187842 POU3F3 JASPAR yes 24074844
chr15 65187829 65187842 POU3F3 JASPAR yes 70542105
chr15 65187830 65187843 POU3F3 JASPAR yes 24074845
chr15 65187830 65187843 POU3F3 JASPAR yes 70542106
chr15 65187853 65187863 SP1 JASPAR yes 24074846
chr15 65187853 65187863 SP1 JASPAR yes 70542107
chr15 65187890 65187911 ZNF263 JASPAR yes 24074847
chr15 65187890 65187911 ZNF263 JASPAR yes 70542108
chr15 65187901 65187922 ZNF263 JASPAR yes 24074848
chr15 65187901 65187922 ZNF263 JASPAR yes 70542109
chr15 65187903 65187924 ZNF263 JASPAR yes 24074849
chr15 65187903 65187924 ZNF263 JASPAR yes 70542110
chr15 65187905 65187926 ZNF263 JASPAR yes 24074850
chr15 65187905 65187926 ZNF263 JASPAR yes 70542111
chr15 65187906 65187927 ZNF263 JASPAR yes 24074851
chr15 65187906 65187927 ZNF263 JASPAR yes 70542112
chr15 65187912 65187919 SPIB JASPAR yes 24074852
chr15 65187912 65187919 SPIB JASPAR yes 70542113
chr15 65187915 65187936 ZNF263 JASPAR yes 24074853
chr15 65187915 65187936 ZNF263 JASPAR yes 70542114
chr15 65187925 65187931 SOX10 JASPAR yes 24074854
chr15 65187925 65187931 SOX10 JASPAR yes 70542115
chr15 65187949 65187959 SP1 JASPAR yes 24074855
chr15 65187949 65187959 SP1 JASPAR yes 70542116
chr15 65187949 65187970 ZNF263 JASPAR yes 24074856
chr15 65187949 65187970 ZNF263 JASPAR yes 70542117
chr15 65187950 65187970 RREB1 JASPAR yes 24074857
chr15 65187950 65187970 RREB1 JASPAR yes 70542118
chr15 65187952 65187957 SP1 TRANSFAC yes 24074858
chr15 65187952 65187957 SP1 TRANSFAC yes 70542119
chr15 65187954 65187968 PLAG1 JASPAR yes 24074859
chr15 65187954 65187968 PLAG1 JASPAR yes 70542120
chr15 65187954 65187969 NR2C2 JASPAR yes 24074860
chr15 65187954 65187969 NR2C2 JASPAR yes 70542121
chr15 65187955 65187965 SP1 JASPAR yes 24074861
chr15 65187955 65187965 SP1 JASPAR yes 70542122
chr15 65187955 65187969 PLAG1 JASPAR yes 24074862
chr15 65187955 65187969 PLAG1 JASPAR yes 70542123
chr15 65187956 65187966 SP1 JASPAR yes 24074863
chr15 65187956 65187966 SP1 JASPAR yes 70542124
chr15 65187957 65187961 LFA1 TRANSFAC yes 24074864
chr15 65187957 65187961 LFA1 TRANSFAC yes 70542125
chr15 65187960 65187970 ZNF740 JASPAR yes 24074865
chr15 65187960 65187970 ZNF740 JASPAR yes 70542126
chr15 65187961 65187971 ZNF740 JASPAR yes 24074866
chr15 65187961 65187971 ZNF740 JASPAR yes 70542127
chr15 65187962 65187972 ZNF740 JASPAR yes 24074867
chr15 65187962 65187972 ZNF740 JASPAR yes 70542128
chr15 65187965 65187976 NFKB1 JASPAR yes 24074868
chr15 65187965 65187976 NFKB1 JASPAR yes 70542129
chr15 65187965 65187978 NFKB2 JASPAR yes 24074869
chr15 65187965 65187978 NFKB2 JASPAR yes 70542130
chr15 65187966 65187976 NFKB1 JASPAR yes 24074870
chr15 65187966 65187976 RELA JASPAR yes 24074871
chr15 65187966 65187976 REL JASPAR yes 24074872
chr15 65187966 65187976 NFKB1 JASPAR yes 70542131
chr15 65187966 65187976 RELA JASPAR yes 70542132
chr15 65187966 65187976 REL JASPAR yes 70542133
chr15 65187966 65187977 NFKB1 JASPAR yes 24074873
chr15 65187966 65187977 NFKB1 JASPAR yes 70542134
chr15 65187969 65187974 H4TF1 TRANSFAC yes 24074874
chr15 65187969 65187974 H4TF1 TRANSFAC yes 70542135
chr15 65187970 65187978 FEV JASPAR yes 24074875
chr15 65187970 65187978 FEV JASPAR yes 70542136
chr15 65187981 65187992 E2F6 JASPAR yes 24074876
chr15 65187981 65187992 E2F6 JASPAR yes 70542137
chr15 65187982 65187987 SP1 TRANSFAC yes 24074877
chr15 65187982 65187987 SP1 TRANSFAC yes 70542138
chr15 65187986 65187992 PEA3 TRANSFAC yes 24074878
chr15 65187986 65187992 PEA3 TRANSFAC yes 70542139
chr15 65187986 65188007 ZNF263 JASPAR yes 24074879
chr15 65187986 65188007 ZNF263 JASPAR yes 70542140
chr15 65187987 65188008 ZNF263 JASPAR yes 24074880
chr15 65187987 65188008 ZNF263 JASPAR yes 70542141
chr15 65187990 65188011 ZNF263 JASPAR yes 24074881
chr15 65187990 65188011 ZNF263 JASPAR yes 70542142
chr15 65187997 65188010 ELF1 JASPAR yes 24074882
chr15 65187997 65188010 ELF1 JASPAR yes 70542143
chr15 65187997 65188018 ZNF263 JASPAR yes 24074883
chr15 65187997 65188018 ZNF263 JASPAR yes 70542144
chr15 65188000 65188011 FLI1 JASPAR yes 24074884
chr15 65188000 65188011 FLI1 JASPAR yes 70542145
chr15 65188000 65188021 ZNF263 JASPAR yes 24074885
chr15 65188000 65188021 ZNF263 JASPAR yes 70542146
chr15 65188001 65188006 ETS2 TRANSFAC yes 24074886
chr15 65188001 65188006 ETS2 TRANSFAC yes 70542147
chr15 65188001 65188009 FEV JASPAR yes 24074887
chr15 65188001 65188009 FEV JASPAR yes 70542148
chr15 65188002 65188009 SPI1 JASPAR yes 24074888
chr15 65188002 65188009 SPI1 JASPAR yes 70542149
chr15 65188003 65188024 ZNF263 JASPAR yes 24074889
chr15 65188003 65188024 ZNF263 JASPAR yes 70542150
chr15 65188004 65188025 ZNF263 JASPAR yes 24074890
chr15 65188004 65188025 ZNF263 JASPAR yes 70542151
chr15 65188009 65188030 ZNF263 JASPAR yes 24074891
chr15 65188009 65188030 ZNF263 JASPAR yes 70542152
chr15 65188015 65188025 SP1 JASPAR yes 24074892
chr15 65188015 65188025 SP1 JASPAR yes 70542153
chr15 65188015 65188036 ZNF263 JASPAR yes 24074893
chr15 65188015 65188036 ZNF263 JASPAR yes 70542154
chr15 65188016 65188023 CEBPA TRANSFAC yes 24074894
chr15 65188016 65188023 CEBPA TRANSFAC yes 70542155
chr15 65188018 65188028 MZF1 JASPAR yes 24074895
chr15 65188018 65188028 MZF1 JASPAR yes 70542156
chr15 65188020 65188030 ETV6 JASPAR yes 24074896
chr15 65188020 65188030 ETV6 JASPAR yes 70542157
chr15 65188022 65188027 ETS2 TRANSFAC yes 24074897
chr15 65188022 65188027 ETS2 TRANSFAC yes 70542158
chr15 65188028 65188049 ZNF263 JASPAR yes 24074898
chr15 65188028 65188049 ZNF263 JASPAR yes 70542159
chr15 65188031 65188052 ZNF263 JASPAR yes 24074899
chr15 65188031 65188052 ZNF263 JASPAR yes 70542160
chr15 65188039 65188054 PRDM1 JASPAR yes 24074900
chr15 65188039 65188054 PRDM1 JASPAR yes 70542161
chr15 65188060 65188064 YY1 TRANSFAC yes 24074901
chr15 65188060 65188064 YY1 TRANSFAC yes 70542162
chr15 65188068 65188072 NFE TRANSFAC yes 24074902
chr15 65188068 65188072 NFE TRANSFAC yes 70542163
chr15 65188069 65188090 IRF1 JASPAR yes 24074903
chr15 65188069 65188090 IRF1 JASPAR yes 70542164
chr15 65188071 65188086 IRF9 JASPAR yes 24074904
chr15 65188071 65188086 IRF9 JASPAR yes 70542165
chr15 65188072 65188086 IRF7 JASPAR yes 24074905
chr15 65188072 65188086 IRF8 JASPAR yes 24074906
chr15 65188072 65188086 IRF7 JASPAR yes 70542166
chr15 65188072 65188086 IRF8 JASPAR yes 70542167
chr15 65188073 65188087 STAT1 JASPAR yes 24074907
chr15 65188073 65188087 STAT1 JASPAR yes 70542168
chr15 65188073 65188088 STAT2 JASPAR yes 24074908
chr15 65188073 65188088 STAT2 JASPAR yes 70542169
chr15 65188073 65188091 IRF2 JASPAR yes 24074909
chr15 65188073 65188091 IRF2 JASPAR yes 70542170
chr15 65188074 65188086 IRF1 JASPAR yes 24074910
chr15 65188074 65188086 IRF1 JASPAR yes 70542171
chr15 65188075 65188096 IRF1 JASPAR yes 24074911
chr15 65188075 65188096 IRF1 JASPAR yes 70542172
chr15 65188077 65188092 IRF9 JASPAR yes 24074912
chr15 65188077 65188092 IRF9 JASPAR yes 70542173
chr15 65188078 65188092 IRF7 JASPAR yes 24074913
chr15 65188078 65188092 IRF8 JASPAR yes 24074914
chr15 65188078 65188092 IRF7 JASPAR yes 70542174
chr15 65188078 65188092 IRF8 JASPAR yes 70542175
chr15 65188079 65188094 STAT2 JASPAR yes 24074915
chr15 65188079 65188094 STAT2 JASPAR yes 70542176
chr15 65188080 65188092 IRF1 JASPAR yes 24074916
chr15 65188080 65188092 IRF1 JASPAR yes 70542177
chr15 65188110 65188121 E2F6 JASPAR yes 24074917
chr15 65188110 65188121 E2F6 JASPAR yes 70542178
chr15 65188149 65188170 REST JASPAR yes 24074918
chr15 65188149 65188170 REST JASPAR yes 70542179
chr15 65188171 65188175 NFE TRANSFAC yes 24074919
chr15 65188171 65188175 NFE TRANSFAC yes 70542180
chr15 65188198 65188216 ESR2 JASPAR yes 24074920
chr15 65188198 65188216 ESR2 JASPAR yes 70542181
chr15 65188200 65188215 ESR2 JASPAR yes 24074921
chr15 65188200 65188215 ESR2 JASPAR yes 70542182
chr15 65188200 65188220 ESR1 JASPAR yes 24074922
chr15 65188200 65188220 ESR1 JASPAR yes 70542183
SNP sites on vista20348[chr15:65187630-65188212]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 65187707 rs560035214 T A
CTCF POLR2A POU2F2
4028853
chr15 65187857 rs1522745 A C
CTCF POLR2A POU2F2 RELA SP1
4028854
chr15 65187874 rs1522744 C T
CTCF POLR2A POU2F2 RELA
4028855
chr15 65187878 rs28606470 G C
CTCF POLR2A POU2F2 RELA
4028856
chr15 65187916 rs151114069 C T
CTCF IRF1 POLR2A RELA SPIB ZNF263
4028857
chr15 65187969 rs72737218 G A
H4TF1 IRF1 NFKB1 NFKB2 NR2C2 PLAG1 POLR2A REL RELA RREB1 ZNF263 ZNF740
4028858
chr15 65187970 rs114954312 G T
FEV H4TF1 IRF1 NFKB1 NFKB2 POLR2A REL RELA RREB1 ZNF263 ZNF740
4028859
chr15 65188063 rs558599895 T G
IRF1 POLR2A RELA YY1
4028860
chr15 65188196 rs74019359 C T
IRF1 POLR2A RELA
4028861
chr15 65188200 rs186239536 G C
ESR1 ESR2 IRF1 POLR2A RELA
4028862
Genes possibly regulated by vista20348[chr15:65187630-65188212]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 65107831 65117867 - PIF1 ENSG00000140451.8 65117867 0.89 1.0 14019 30237
chr15 65134082 65223118 + AC069368.3 ENSG00000249240.2 65134082 0.94 0.89 14020 46452
chr15 65134088 65160206 + PLEKHO2 ENSG00000241839.5 65134088 0.89 1.0 14021 46458
chr15 65204101 65251042 + ANKDD1A ENSG00000166839.12 65204101 0.84 1.0 14022 84111
chr15 65255362 65282648 - SPG21 ENSG00000090487.6 65282648 0.65 0.99 14023 5564
Expression level of Genes
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miRNAs possibly regulated by vista20348[chr15:65187630-65188212]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results