EnhancerDB
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  3. vista20349[chr15:65189466-65189943]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20349[chr15:65189466-65189943]
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Tissue distribution of vista20349
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Transcription factor that possibly regulate vista20349[chr15:65189466-65189943]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 65189574 65189858 NR3C1 UCSC Txn Factor no Conserved 108146739
chr15 65189648 65189818 BHLHE40 UCSC Txn Factor no Conserved 108146746
chr15 65189475 65189490 PRDM1 JASPAR yes 24075064
chr15 65189475 65189490 PRDM1 JASPAR yes 70542184
chr15 65189495 65189511 ZNF143 JASPAR yes 24075065
chr15 65189495 65189511 ZNF143 JASPAR yes 70542185
chr15 65189550 65189554 H1TF2 TRANSFAC yes 24075066
chr15 65189550 65189554 NFE TRANSFAC yes 24075067
chr15 65189550 65189554 SRF TRANSFAC yes 24075068
chr15 65189550 65189554 H1TF2 TRANSFAC yes 70542186
chr15 65189550 65189554 NFE TRANSFAC yes 70542187
chr15 65189550 65189554 SRF TRANSFAC yes 70542188
chr15 65189550 65189556 NFYC TRANSFAC yes 24075069
chr15 65189550 65189556 NFYC TRANSFAC yes 70542189
chr15 65189560 65189564 LFA1 TRANSFAC yes 24075070
chr15 65189560 65189564 LFA1 TRANSFAC yes 70542190
chr15 65189577 65189592 TFAP2C JASPAR yes 24075071
chr15 65189577 65189592 TFAP2C JASPAR yes 70542191
chr15 65189582 65189592 SP1 JASPAR yes 24075072
chr15 65189582 65189592 SP1 JASPAR yes 70542192
chr15 65189583 65189590 CEBPA TRANSFAC yes 24075073
chr15 65189583 65189590 CEBPA TRANSFAC yes 70542193
chr15 65189628 65189640 NHLH1 JASPAR yes 24075074
chr15 65189628 65189640 NHLH1 JASPAR yes 70542194
chr15 65189629 65189639 NHLH1 JASPAR yes 24075075
chr15 65189629 65189639 NHLH1 JASPAR yes 70542195
chr15 65189634 65189640 NFE2 TRANSFAC yes 24075076
chr15 65189634 65189640 NFE2 TRANSFAC yes 70542196
chr15 65189660 65189667 SPIB JASPAR yes 24075077
chr15 65189660 65189667 SPIB JASPAR yes 70542197
chr15 65189682 65189703 ZNF263 JASPAR yes 24075078
chr15 65189682 65189703 ZNF263 JASPAR yes 70542198
chr15 65189685 65189698 ELF1 JASPAR yes 24075079
chr15 65189685 65189698 ELF1 JASPAR yes 70542199
chr15 65189688 65189694 PEA3 TRANSFAC yes 24075080
chr15 65189688 65189694 PEA3 TRANSFAC yes 70542200
chr15 65189688 65189699 FLI1 JASPAR yes 24075081
chr15 65189688 65189699 FLI1 JASPAR yes 70542201
chr15 65189698 65189702 ESR1 TRANSFAC yes 24075082
chr15 65189698 65189702 ESR1 TRANSFAC yes 70542202
chr15 65189711 65189725 JUN JASPAR yes 24075083
chr15 65189711 65189725 JUN JASPAR yes 70542203
chr15 65189713 65189724 BATF JASPAR yes 24075084
chr15 65189713 65189724 BATF JASPAR yes 70542204
chr15 65189714 65189725 FOSL2 JASPAR yes 24075085
chr15 65189714 65189725 JUNB JASPAR yes 24075086
chr15 65189714 65189725 NFE2L2 JASPAR yes 24075087
chr15 65189714 65189725 FOSL2 JASPAR yes 70542205
chr15 65189714 65189725 JUNB JASPAR yes 70542206
chr15 65189714 65189725 NFE2L2 JASPAR yes 70542207
chr15 65189715 65189726 FOS JASPAR yes 24075088
chr15 65189715 65189726 FOSL1 JASPAR yes 24075089
chr15 65189715 65189726 JUND JASPAR yes 24075090
chr15 65189715 65189726 FOS JASPAR yes 70542208
chr15 65189715 65189726 FOSL1 JASPAR yes 70542209
chr15 65189715 65189726 JUND JASPAR yes 70542210
chr15 65189716 65189727 FOSL2 JASPAR yes 24075091
chr15 65189716 65189727 JUNB JASPAR yes 24075092
chr15 65189716 65189727 FOSL2 JASPAR yes 70542211
chr15 65189716 65189727 JUNB JASPAR yes 70542212
chr15 65189736 65189747 ESRRB JASPAR yes 24075093
chr15 65189736 65189747 ESRRB JASPAR yes 70542213
chr15 65189740 65189752 BHLHE23 JASPAR yes 24075094
chr15 65189740 65189752 PKNOX1 JASPAR yes 24075095
chr15 65189740 65189752 BHLHE23 JASPAR yes 70542214
chr15 65189740 65189752 PKNOX1 JASPAR yes 70542215
chr15 65189741 65189751 BHLHE22 JASPAR yes 24075096
chr15 65189741 65189751 NEUROD2 JASPAR yes 24075097
chr15 65189741 65189751 NEUROG2 JASPAR yes 24075098
chr15 65189741 65189751 OLIG1 JASPAR yes 24075099
chr15 65189741 65189751 OLIG2 JASPAR yes 24075100
chr15 65189741 65189751 OLIG3 JASPAR yes 24075101
chr15 65189741 65189751 BHLHE22 JASPAR yes 70542216
chr15 65189741 65189751 NEUROD2 JASPAR yes 70542217
chr15 65189741 65189751 NEUROG2 JASPAR yes 70542218
chr15 65189741 65189751 OLIG1 JASPAR yes 70542219
chr15 65189741 65189751 OLIG2 JASPAR yes 70542220
chr15 65189741 65189751 OLIG3 JASPAR yes 70542221
chr15 65189744 65189764 TP53 JASPAR yes 24075102
chr15 65189744 65189764 TP53 JASPAR yes 70542222
chr15 65189751 65189764 NFKB2 JASPAR yes 24075103
chr15 65189751 65189764 NFKB2 JASPAR yes 70542223
chr15 65189752 65189763 NFKB1 JASPAR yes 24075104
chr15 65189752 65189763 NFKB1 JASPAR yes 70542224
chr15 65189799 65189811 TFAP2A JASPAR yes 24075105
chr15 65189799 65189811 TFAP2B JASPAR yes 24075106
chr15 65189799 65189811 TFAP2C JASPAR yes 24075107
chr15 65189799 65189811 TFAP2A JASPAR yes 70542225
chr15 65189799 65189811 TFAP2B JASPAR yes 70542226
chr15 65189799 65189811 TFAP2C JASPAR yes 70542227
chr15 65189805 65189810 TFAP2A TRANSFAC yes 24075108
chr15 65189805 65189810 TFAP2A TRANSFAC yes 70542228
chr15 65189805 65189811 MZF1 JASPAR yes 24075109
chr15 65189805 65189811 MZF1 JASPAR yes 70542229
chr15 65189806 65189816 GSC2 JASPAR yes 24075110
chr15 65189806 65189816 GSC JASPAR yes 24075111
chr15 65189806 65189816 GSC2 JASPAR yes 70542230
chr15 65189806 65189816 GSC JASPAR yes 70542231
chr15 65189807 65189815 OTX1 JASPAR yes 24075112
chr15 65189807 65189815 OTX1 JASPAR yes 70542232
chr15 65189807 65189816 PITX3 JASPAR yes 24075113
chr15 65189807 65189816 PITX3 JASPAR yes 70542233
chr15 65189820 65189841 ZNF263 JASPAR yes 24075114
chr15 65189820 65189841 ZNF263 JASPAR yes 70542234
chr15 65189833 65189847 EBF1 JASPAR yes 24075115
chr15 65189833 65189847 EBF1 JASPAR yes 70542235
chr15 65189833 65189848 ZIC3 JASPAR yes 24075116
chr15 65189833 65189848 ZIC3 JASPAR yes 70542236
chr15 65189845 65189856 FOXH1 JASPAR yes 24075117
chr15 65189845 65189856 FOXH1 JASPAR yes 70542237
chr15 65189849 65189855 ZNF354C JASPAR yes 24075118
chr15 65189849 65189855 ZNF354C JASPAR yes 70542238
chr15 65189856 65189862 MZF1 JASPAR yes 24075119
chr15 65189856 65189862 MZF1 JASPAR yes 70542239
chr15 65189868 65189881 NR2F1 JASPAR yes 24075120
chr15 65189868 65189881 NR2F1 JASPAR yes 70542240
chr15 65189871 65189879 NR4A2 JASPAR yes 24075121
chr15 65189871 65189879 NR4A2 JASPAR yes 70542241
chr15 65189872 65189880 CREB1 JASPAR yes 24075122
chr15 65189872 65189880 CREB1 JASPAR yes 70542242
chr15 65189872 65189887 TFAP2A JASPAR yes 24075123
chr15 65189872 65189887 TFAP2A JASPAR yes 70542243
chr15 65189884 65189890 YY1 JASPAR yes 24075124
chr15 65189884 65189890 YY1 JASPAR yes 70542244
chr15 65189914 65189918 ESR1 TRANSFAC yes 24075125
chr15 65189914 65189918 ESR1 TRANSFAC yes 70542245
chr15 65189929 65189935 NFIC JASPAR yes 24075126
chr15 65189929 65189935 NFIC JASPAR yes 70542246
SNP sites on vista20349[chr15:65189466-65189943]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 65189507 rs552347723 C G
ZNF143
4028873
chr15 65189559 rs114799971 A T no 4028874
chr15 65189683 rs187679897 G A
BHLHE40 NR3C1 ZNF263
4028875
chr15 65189745 rs73471122 A G
BHLHE22 BHLHE23 BHLHE40 ESRRB NEUROD2 NEUROG2 NR3C1 OLIG1 OLIG2 OLIG3 PKNOX1 TP53
4028876
chr15 65189746 rs77466959 T G
BHLHE22 BHLHE23 BHLHE40 ESRRB NEUROD2 NEUROG2 NR3C1 OLIG1 OLIG2 OLIG3 PKNOX1 TP53
4028877
chr15 65189869 rs572359006 C A
NR2F1
4028878
Genes possibly regulated by vista20349[chr15:65189466-65189943]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 65107831 65117867 - PIF1 ENSG00000140451.8 65117867 0.89 1.0 14019 28401
chr15 65134082 65223118 + AC069368.3 ENSG00000249240.2 65134082 0.94 0.89 14020 44616
chr15 65134088 65160206 + PLEKHO2 ENSG00000241839.5 65134088 0.89 1.0 14021 44622
chr15 65204101 65251042 + ANKDD1A ENSG00000166839.12 65204101 0.84 1.0 14022 85842
chr15 65255362 65282648 - SPG21 ENSG00000090487.6 65282648 0.65 0.99 14023 7295
Expression level of Genes
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miRNAs possibly regulated by vista20349[chr15:65189466-65189943]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results