EnhancerDB
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  3. vista20377[chr15:66163349-66163534]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20377[chr15:66163349-66163534]
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Tissue distribution of vista20377
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Transcription factor that possibly regulate vista20377[chr15:66163349-66163534]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 66162582 66163636 POLR2A UCSC Txn Factor no Conserved 108147619
chr15 66162582 66163636 POLR2A UCSC Txn Factor no Conserved 108147620
chr15 66162799 66163524 ZNF263 UCSC Txn Factor no Conserved 108147634
chr15 66162799 66163524 ZNF263 UCSC Txn Factor no Conserved 108147635
chr15 66163353 66163359 SOX10 JASPAR yes 24115093
chr15 66163353 66163359 SOX10 JASPAR yes 70543948
chr15 66163358 66163368 EVX1 JASPAR yes 24115094
chr15 66163358 66163368 EVX1 JASPAR yes 70543949
chr15 66163361 66163365 YY1 TRANSFAC yes 24115095
chr15 66163361 66163365 YY1 TRANSFAC yes 70543950
chr15 66163390 66163404 PAX6 JASPAR yes 24115096
chr15 66163390 66163404 PAX6 JASPAR yes 70543951
chr15 66163446 66163450 NFE TRANSFAC yes 24115097
chr15 66163446 66163450 NFE TRANSFAC yes 70543952
chr15 66163470 66163482 PBX1 JASPAR yes 24115098
chr15 66163470 66163482 PBX1 JASPAR yes 70543953
chr15 66163481 66163495 PAX6 JASPAR yes 24115099
chr15 66163481 66163495 PAX6 JASPAR yes 70543954
chr15 66163496 66163501 H4TF1 TRANSFAC yes 24115100
chr15 66163496 66163501 H4TF1 TRANSFAC yes 70543955
chr15 66163501 66163507 TCF4 TRANSFAC yes 24115101
chr15 66163501 66163507 TCF4 TRANSFAC yes 70543956
chr15 66163511 66163515 H1TF2 TRANSFAC yes 24115102
chr15 66163511 66163515 NFE TRANSFAC yes 24115103
chr15 66163511 66163515 SRF TRANSFAC yes 24115104
chr15 66163511 66163515 H1TF2 TRANSFAC yes 70543957
chr15 66163511 66163515 NFE TRANSFAC yes 70543958
chr15 66163511 66163515 SRF TRANSFAC yes 70543959
SNP sites on vista20377[chr15:66163349-66163534]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 66163498 rs141229002 ATTTCT A
H4TF1 POLR2A ZNF263
4033436
chr15 66163498 rs370599725 ATTTCT A
H4TF1 POLR2A ZNF263
4033437
chr15 66163501 rs183101664 T G
H4TF1 POLR2A TCF4 ZNF263
4033438
chr15 66163502 rs78582271 C G
POLR2A TCF4 ZNF263
4033439
chr15 66163507 rs553486146 C G
POLR2A TCF4 ZNF263
4033440
Genes possibly regulated by vista20377[chr15:66163349-66163534]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 65950384 66084631 - DENND4A ENSG00000174485.10 66084631 0.74 0.98 14039 21282
Expression level of Genes
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miRNAs possibly regulated by vista20377[chr15:66163349-66163534]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results