EnhancerDB
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  3. vista20383[chr15:66446289-66446658]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20383[chr15:66446289-66446658]
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Tissue distribution of vista20383
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Transcription factor that possibly regulate vista20383[chr15:66446289-66446658]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 66446325 66446683 TCF12 UCSC Txn Factor no Conserved 108147734
chr15 66446342 66446712 EP300 UCSC Txn Factor no Conserved 108147738
chr15 66446397 66446633 RUNX3 UCSC Txn Factor no Conserved 108147748
chr15 66446295 66446299 H1TF2 TRANSFAC yes 24133803
chr15 66446295 66446299 NFE TRANSFAC yes 24133804
chr15 66446295 66446299 SRF TRANSFAC yes 24133805
chr15 66446295 66446299 H1TF2 TRANSFAC yes 70544214
chr15 66446295 66446299 NFE TRANSFAC yes 70544215
chr15 66446295 66446299 SRF TRANSFAC yes 70544216
chr15 66446311 66446323 PKNOX1 JASPAR yes 24133806
chr15 66446311 66446323 PKNOX2 JASPAR yes 24133807
chr15 66446311 66446323 TGIF1 JASPAR yes 24133808
chr15 66446311 66446323 TGIF2 JASPAR yes 24133809
chr15 66446311 66446323 PKNOX1 JASPAR yes 70544217
chr15 66446311 66446323 PKNOX2 JASPAR yes 70544218
chr15 66446311 66446323 TGIF1 JASPAR yes 70544219
chr15 66446311 66446323 TGIF2 JASPAR yes 70544220
chr15 66446318 66446331 SCRT2 JASPAR yes 24133810
chr15 66446318 66446331 SCRT2 JASPAR yes 70544221
chr15 66446321 66446334 ZBTB18 JASPAR yes 24133811
chr15 66446321 66446334 ZBTB18 JASPAR yes 70544222
chr15 66446322 66446332 MSC JASPAR yes 24133812
chr15 66446322 66446332 NHLH1 JASPAR yes 24133813
chr15 66446322 66446332 MSC JASPAR yes 70544223
chr15 66446322 66446332 NHLH1 JASPAR yes 70544224
chr15 66446324 66446339 ZIC3 JASPAR yes 24133814
chr15 66446324 66446339 ZIC4 JASPAR yes 24133815
chr15 66446324 66446339 ZIC3 JASPAR yes 70544225
chr15 66446324 66446339 ZIC4 JASPAR yes 70544226
chr15 66446325 66446339 GLIS2 JASPAR yes 24133816
chr15 66446325 66446339 ZIC1 JASPAR yes 24133817
chr15 66446325 66446339 GLIS2 JASPAR yes 70544227
chr15 66446325 66446339 ZIC1 JASPAR yes 70544228
chr15 66446335 66446339 LFA1 TRANSFAC yes 24133818
chr15 66446335 66446339 LFA1 TRANSFAC yes 70544229
chr15 66446346 66446366 TP53 JASPAR yes 24133819
chr15 66446346 66446366 TP53 JASPAR yes 70544230
chr15 66446369 66446379 NHLH1 JASPAR yes 24133820
chr15 66446369 66446379 NHLH1 JASPAR yes 70544231
chr15 66446420 66446435 FOXP1 JASPAR yes 24133821
chr15 66446420 66446435 FOXP1 JASPAR yes 70544232
chr15 66446421 66446432 FOXA1 JASPAR yes 24133822
chr15 66446421 66446432 FOXA1 JASPAR yes 70544233
chr15 66446421 66446436 FOXA1 JASPAR yes 24133823
chr15 66446421 66446436 FOXA1 JASPAR yes 70544234
chr15 66446422 66446434 FOXC2 JASPAR yes 24133824
chr15 66446422 66446434 FOXC2 JASPAR yes 70544235
chr15 66446422 66446442 RREB1 JASPAR yes 24133825
chr15 66446422 66446442 RREB1 JASPAR yes 70544236
chr15 66446423 66446435 FOXI1 JASPAR yes 24133826
chr15 66446423 66446435 FOXI1 JASPAR yes 70544237
chr15 66446423 66446443 RREB1 JASPAR yes 24133827
chr15 66446423 66446443 RREB1 JASPAR yes 70544238
chr15 66446449 66446461 ZBTB7B JASPAR yes 24133828
chr15 66446449 66446461 ZBTB7B JASPAR yes 70544239
chr15 66446449 66446464 NFYB JASPAR yes 24133829
chr15 66446449 66446464 NFYB JASPAR yes 70544240
chr15 66446451 66446467 NFYA JASPAR yes 24133830
chr15 66446451 66446467 NFYA JASPAR yes 70544241
chr15 66446452 66446470 NFYA JASPAR yes 24133831
chr15 66446452 66446470 NFYA JASPAR yes 70544242
chr15 66446456 66446460 H1TF2 TRANSFAC yes 24133832
chr15 66446456 66446460 NFE TRANSFAC yes 24133833
chr15 66446456 66446460 SRF TRANSFAC yes 24133834
chr15 66446456 66446460 H1TF2 TRANSFAC yes 70544243
chr15 66446456 66446460 NFE TRANSFAC yes 70544244
chr15 66446456 66446460 SRF TRANSFAC yes 70544245
chr15 66446493 66446512 CTCF JASPAR yes 24133835
chr15 66446493 66446512 CTCF JASPAR yes 70544246
chr15 66446498 66446507 SNAI2 JASPAR yes 24133836
chr15 66446498 66446507 SNAI2 JASPAR yes 70544247
chr15 66446498 66446508 ID4 JASPAR yes 24133837
chr15 66446498 66446508 NHLH1 JASPAR yes 24133838
chr15 66446498 66446508 TCF3 JASPAR yes 24133839
chr15 66446498 66446508 TCF4 JASPAR yes 24133840
chr15 66446498 66446508 ID4 JASPAR yes 70544248
chr15 66446498 66446508 NHLH1 JASPAR yes 70544249
chr15 66446498 66446508 TCF3 JASPAR yes 70544250
chr15 66446498 66446508 TCF4 JASPAR yes 70544251
chr15 66446500 66446509 ZEB1 JASPAR yes 24133841
chr15 66446500 66446509 ZEB1 JASPAR yes 70544252
chr15 66446501 66446509 TBX5 JASPAR yes 24133842
chr15 66446501 66446509 TBX5 JASPAR yes 70544253
chr15 66446519 66446537 IRF2 JASPAR yes 24133843
chr15 66446519 66446537 IRF2 JASPAR yes 70544254
chr15 66446527 66446530 MYB TRANSFAC yes 24133844
chr15 66446527 66446530 MYB TRANSFAC yes 70544255
chr15 66446538 66446558 RREB1 JASPAR yes 24133845
chr15 66446538 66446558 RREB1 JASPAR yes 70544256
chr15 66446557 66446560 MYB TRANSFAC yes 24133846
chr15 66446557 66446560 MYB TRANSFAC yes 70544257
chr15 66446560 66446564 NFE TRANSFAC yes 24133847
chr15 66446560 66446564 NFE TRANSFAC yes 70544258
chr15 66446571 66446581 NFATC3 JASPAR yes 24133848
chr15 66446571 66446581 NFATC3 JASPAR yes 70544259
chr15 66446572 66446579 NFATC2 JASPAR yes 24133849
chr15 66446572 66446579 NFATC2 JASPAR yes 70544260
chr15 66446586 66446599 EOMES JASPAR yes 24133850
chr15 66446586 66446599 EOMES JASPAR yes 70544261
chr15 66446588 66446598 TBR1 JASPAR yes 24133851
chr15 66446588 66446598 TBR1 JASPAR yes 70544262
chr15 66446588 66446599 TBX2 JASPAR yes 24133852
chr15 66446588 66446599 TBX2 JASPAR yes 70544263
chr15 66446589 66446599 TBX21 JASPAR yes 24133853
chr15 66446589 66446599 TBX21 JASPAR yes 70544264
chr15 66446590 66446593 MYB TRANSFAC yes 24133854
chr15 66446590 66446593 MYB TRANSFAC yes 70544265
chr15 66446590 66446598 MGA JASPAR yes 24133855
chr15 66446590 66446598 TBX15 JASPAR yes 24133856
chr15 66446590 66446598 TBX1 JASPAR yes 24133857
chr15 66446590 66446598 TBX4 JASPAR yes 24133858
chr15 66446590 66446598 TBX5 JASPAR yes 24133859
chr15 66446590 66446598 MGA JASPAR yes 70544266
chr15 66446590 66446598 TBX15 JASPAR yes 70544267
chr15 66446590 66446598 TBX1 JASPAR yes 70544268
chr15 66446590 66446598 TBX4 JASPAR yes 70544269
chr15 66446590 66446598 TBX5 JASPAR yes 70544270
chr15 66446591 66446601 FIGLA JASPAR yes 24133860
chr15 66446591 66446601 FIGLA JASPAR yes 70544271
chr15 66446591 66446606 SOX21 JASPAR yes 24133861
chr15 66446591 66446606 SOX21 JASPAR yes 70544272
chr15 66446591 66446607 SOX4 JASPAR yes 24133862
chr15 66446591 66446607 SOX4 JASPAR yes 70544273
chr15 66446593 66446598 USF2 TRANSFAC yes 24133863
chr15 66446593 66446598 USF2 TRANSFAC yes 70544274
chr15 66446605 66446626 ZNF263 JASPAR yes 24133864
chr15 66446605 66446626 ZNF263 JASPAR yes 70544275
chr15 66446609 66446630 ZNF263 JASPAR yes 24133865
chr15 66446609 66446630 ZNF263 JASPAR yes 70544276
chr15 66446617 66446628 E2F6 JASPAR yes 24133866
chr15 66446617 66446628 E2F6 JASPAR yes 70544277
chr15 66446624 66446630 MZF1 JASPAR yes 24133867
chr15 66446624 66446630 MZF1 JASPAR yes 70544278
chr15 66446631 66446642 E2F1 JASPAR yes 24133868
chr15 66446631 66446642 E2F1 JASPAR yes 70544279
chr15 66446639 66446651 GLI2 JASPAR yes 24133869
chr15 66446639 66446651 GLI2 JASPAR yes 70544280
SNP sites on vista20383[chr15:66446289-66446658]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 66446316 rs74697753 G A
PKNOX1 PKNOX2 TGIF1 TGIF2
4035325
chr15 66446341 rs189766843 C T
TCF12
4035326
chr15 66446370 rs375093513 T G
EP300 NHLH1 TCF12
4035327
chr15 66446529 rs78470492 A G
EP300 IRF2 MYB RUNX3 TCF12
4035328
chr15 66446543 rs79394454 G A
EP300 RREB1 RUNX3 TCF12
4035329
chr15 66446636 rs35477321 G GCGCT
E2F1 EP300 TCF12
4035330
chr15 66446636 rs76006870 G GCGCT
E2F1 EP300 TCF12
4035331
Genes possibly regulated by vista20383[chr15:66446289-66446658]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 66187417 66546085 - MEGF11 ENSG00000157890.13 66546085 0.96 1.0 14041 573
Expression level of Genes
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miRNAs possibly regulated by vista20383[chr15:66446289-66446658]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results