EnhancerDB
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  3. vista20395[chr15:66965990-66966192]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20395[chr15:66965990-66966192]
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Tissue distribution of vista20395
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Transcription factor that possibly regulate vista20395[chr15:66965990-66966192]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 66965987 66965993 SP1 TRANSFAC yes 24161660
chr15 66965987 66965993 SP1 TRANSFAC yes 70544836
chr15 66965988 66965993 SP1 TRANSFAC yes 24161661
chr15 66965988 66965993 SP1 TRANSFAC yes 70544837
chr15 66965995 66966005 ERG JASPAR yes 24161662
chr15 66965995 66966005 FLI1 JASPAR yes 24161663
chr15 66965995 66966005 ERG JASPAR yes 70544838
chr15 66965995 66966005 FLI1 JASPAR yes 70544839
chr15 66965995 66966006 ETV2 JASPAR yes 24161664
chr15 66965995 66966006 ETV2 JASPAR yes 70544840
chr15 66965997 66966003 ETS1 JASPAR yes 24161665
chr15 66965997 66966003 ETS1 JASPAR yes 70544841
chr15 66965997 66966007 ELK1 JASPAR yes 24161666
chr15 66965997 66966007 ELK1 JASPAR yes 70544842
chr15 66966018 66966021 MYB TRANSFAC yes 24161667
chr15 66966018 66966021 MYB TRANSFAC yes 70544843
chr15 66966021 66966025 NFE TRANSFAC yes 24161668
chr15 66966021 66966025 NFE TRANSFAC yes 70544844
chr15 66966039 66966048 SP1 TRANSFAC yes 24161669
chr15 66966039 66966048 SP1 TRANSFAC yes 70544845
chr15 66966039 66966059 RREB1 JASPAR yes 24161670
chr15 66966039 66966059 RREB1 JASPAR yes 70544846
chr15 66966040 66966060 RREB1 JASPAR yes 24161671
chr15 66966040 66966060 RREB1 JASPAR yes 70544847
chr15 66966042 66966062 RREB1 JASPAR yes 24161672
chr15 66966042 66966062 RREB1 JASPAR yes 70544848
chr15 66966043 66966057 PLAG1 JASPAR yes 24161673
chr15 66966043 66966057 PLAG1 JASPAR yes 70544849
chr15 66966043 66966063 RREB1 JASPAR yes 24161674
chr15 66966043 66966063 RREB1 JASPAR yes 70544850
chr15 66966044 66966054 SP1 JASPAR yes 24161675
chr15 66966044 66966054 SP1 JASPAR yes 70544851
chr15 66966044 66966064 RREB1 JASPAR yes 24161676
chr15 66966044 66966064 RREB1 JASPAR yes 70544852
chr15 66966045 66966055 SP1 JASPAR yes 24161677
chr15 66966045 66966055 SP1 TRANSFAC yes 24161678
chr15 66966045 66966055 SP1 JASPAR yes 70544853
chr15 66966045 66966055 SP1 TRANSFAC yes 70544854
chr15 66966045 66966065 RREB1 JASPAR yes 24161679
chr15 66966045 66966065 RREB1 JASPAR yes 70544855
chr15 66966046 66966056 SP1 JASPAR yes 24161680
chr15 66966046 66966056 SP1 JASPAR yes 70544856
chr15 66966047 66966057 ZNF740 JASPAR yes 24161681
chr15 66966047 66966057 ZNF740 JASPAR yes 70544857
chr15 66966047 66966067 RREB1 JASPAR yes 24161682
chr15 66966047 66966067 RREB1 JASPAR yes 70544858
chr15 66966048 66966068 RREB1 JASPAR yes 24161683
chr15 66966048 66966068 RREB1 JASPAR yes 70544859
chr15 66966049 66966059 ZNF740 JASPAR yes 24161684
chr15 66966049 66966059 ZNF740 JASPAR yes 70544860
chr15 66966049 66966069 RREB1 JASPAR yes 24161685
chr15 66966049 66966069 RREB1 JASPAR yes 70544861
chr15 66966050 66966060 ZNF740 JASPAR yes 24161686
chr15 66966050 66966060 ZNF740 JASPAR yes 70544862
chr15 66966052 66966072 RREB1 JASPAR yes 24161687
chr15 66966052 66966072 RREB1 JASPAR yes 70544863
chr15 66966053 66966073 RREB1 JASPAR yes 24161688
chr15 66966053 66966073 RREB1 JASPAR yes 70544864
chr15 66966058 66966068 SP1 JASPAR yes 24161689
chr15 66966058 66966068 SP1 JASPAR yes 70544865
chr15 66966059 66966067 SP1 TRANSFAC yes 24161690
chr15 66966059 66966067 SP1 TRANSFAC yes 70544866
chr15 66966064 66966084 RREB1 JASPAR yes 24161691
chr15 66966064 66966084 RREB1 JASPAR yes 70544867
chr15 66966073 66966090 RARA JASPAR yes 24161692
chr15 66966073 66966090 RARA JASPAR yes 70544868
chr15 66966080 66966090 SP1 JASPAR yes 24161693
chr15 66966080 66966090 SP1 JASPAR yes 70544869
chr15 66966081 66966096 TFAP2A JASPAR yes 24161694
chr15 66966081 66966096 TFAP2A JASPAR yes 70544870
chr15 66966083 66966089 NFE2 TRANSFAC yes 24161695
chr15 66966083 66966089 NFE2 TRANSFAC yes 70544871
chr15 66966084 66966095 TFAP2A JASPAR yes 24161696
chr15 66966084 66966095 TFAP2A JASPAR yes 70544872
chr15 66966084 66966096 TFAP2A JASPAR yes 24161697
chr15 66966084 66966096 TFAP2A JASPAR yes 70544873
chr15 66966091 66966101 SP1 JASPAR yes 24161698
chr15 66966091 66966101 SP1 JASPAR yes 70544874
chr15 66966092 66966099 SP1 TRANSFAC yes 24161699
chr15 66966092 66966099 SP1 TRANSFAC yes 70544875
chr15 66966093 66966100 SP1 TRANSFAC yes 24161700
chr15 66966093 66966100 SP1 TRANSFAC yes 70544876
chr15 66966094 66966099 SP1 TRANSFAC yes 24161701
chr15 66966094 66966099 SP1 TRANSFAC yes 70544877
chr15 66966094 66966100 SP1 TRANSFAC yes 24161702
chr15 66966094 66966100 SP1 TRANSFAC yes 70544878
chr15 66966112 66966127 MEF2A JASPAR yes 24161703
chr15 66966112 66966127 MEF2A JASPAR yes 70544879
chr15 66966115 66966119 H1TF2 TRANSFAC yes 24161704
chr15 66966115 66966119 NFE TRANSFAC yes 24161705
chr15 66966115 66966119 SRF TRANSFAC yes 24161706
chr15 66966115 66966119 H1TF2 TRANSFAC yes 70544880
chr15 66966115 66966119 NFE TRANSFAC yes 70544881
chr15 66966115 66966119 SRF TRANSFAC yes 70544882
chr15 66966126 66966131 SP1 TRANSFAC yes 24161707
chr15 66966126 66966131 SP1 TRANSFAC yes 70544883
chr15 66966142 66966148 SP1 TRANSFAC yes 24161708
chr15 66966142 66966148 SP1 TRANSFAC yes 70544884
chr15 66966142 66966152 SP1 JASPAR yes 24161709
chr15 66966142 66966152 SP1 JASPAR yes 70544885
chr15 66966178 66966199 REST JASPAR yes 24161710
chr15 66966178 66966199 REST JASPAR yes 70544886
SNP sites on vista20395[chr15:66965990-66966192]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 66966065 rs200372487 CCCCAACCCTGA C
RREB1 SP1
4038854
chr15 66966065 rs59720054 CCCCAACCCTGA C
RREB1 SP1
4038855
chr15 66966129 rs73486327 G C
SP1
4038856
chr15 66966131 rs577918070 C A,T
SP1
4038857
chr15 66966171 rs12708486 C A,T no 4038858
chr15 66966187 rs114947480 C T
REST
4038859
chr15 66966189 rs12708487 A T
REST
4038860
Genes possibly regulated by vista20395[chr15:66965990-66966192]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 66874528 66978132 + RP11-321F6.1 ENSG00000259471.1 66874528 0.98 0.99 14049 8538
chr15 66994566 67074338 + SMAD6 ENSG00000137834.10 66994566 0.89 0.99 14050 71626
Expression level of Genes
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miRNAs possibly regulated by vista20395[chr15:66965990-66966192]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results