EnhancerDB
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  3. vista20400[chr15:66993287-66993569]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20400[chr15:66993287-66993569]
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Tissue distribution of vista20400
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Transcription factor that possibly regulate vista20400[chr15:66993287-66993569]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 66992895 66993782 E2F1 UCSC Txn Factor no Conserved 108148370
chr15 66992919 66995000 POLR2A UCSC Txn Factor no Conserved 108148374
chr15 66993291 66993854 TCF7L2 UCSC Txn Factor no Conserved 108148416
chr15 66993288 66993292 ESR1 TRANSFAC yes 70545038
chr15 66993292 66993306 EBF1 JASPAR yes 70545039
chr15 66993293 66993304 EBF1 JASPAR yes 70545040
chr15 66993307 66993312 SP1 TRANSFAC yes 70545041
chr15 66993308 66993320 TFAP2A JASPAR yes 70545042
chr15 66993311 66993322 NRF1 JASPAR yes 70545043
chr15 66993316 66993330 ZIC1 JASPAR yes 70545044
chr15 66993316 66993331 ZIC4 JASPAR yes 70545045
chr15 66993326 66993330 ESR1 TRANSFAC yes 70545046
chr15 66993340 66993352 E2F1 JASPAR yes 70545047
chr15 66993347 66993355 SP1 TRANSFAC yes 70545048
chr15 66993347 66993362 TFAP2A JASPAR yes 70545049
chr15 66993347 66993362 TFAP2C JASPAR yes 70545050
chr15 66993350 66993361 TFAP2A JASPAR yes 70545051
chr15 66993350 66993362 TFAP2A JASPAR yes 70545052
chr15 66993350 66993362 TFAP2B JASPAR yes 70545053
chr15 66993350 66993362 TFAP2C JASPAR yes 70545054
chr15 66993351 66993360 TFAP2A JASPAR yes 70545055
chr15 66993352 66993367 NFYB JASPAR yes 70545056
chr15 66993354 66993370 NFYA JASPAR yes 70545057
chr15 66993355 66993373 NFYA JASPAR yes 70545058
chr15 66993359 66993363 H1TF2 TRANSFAC yes 70545059
chr15 66993359 66993363 NFE TRANSFAC yes 70545060
chr15 66993359 66993363 SRF TRANSFAC yes 70545061
chr15 66993387 66993396 TFAP4 TRANSFAC yes 70545062
chr15 66993394 66993399 SP1 TRANSFAC yes 70545063
chr15 66993406 66993415 THAP1 JASPAR yes 70545064
chr15 66993411 66993417 ETS1 JASPAR yes 70545065
chr15 66993416 66993426 SP1 JASPAR yes 70545066
chr15 66993417 66993425 SP1 TRANSFAC yes 70545067
chr15 66993417 66993426 SP1 TRANSFAC yes 70545068
chr15 66993418 66993423 SP1 TRANSFAC yes 70545069
chr15 66993419 66993424 SP1 TRANSFAC yes 70545070
chr15 66993419 66993425 SP1 TRANSFAC yes 70545071
chr15 66993430 66993445 ZIC3 JASPAR yes 70545072
chr15 66993435 66993445 SP1 JASPAR yes 70545073
chr15 66993438 66993443 SP1 TRANSFAC yes 70545074
chr15 66993441 66993446 SP1 TRANSFAC yes 70545075
chr15 66993455 66993470 NR2C2 JASPAR yes 70545076
chr15 66993463 66993472 HiNF-C TRANSFAC yes 70545077
chr15 66993463 66993473 SP1 JASPAR yes 70545078
chr15 66993464 66993470 SP1 TRANSFAC yes 70545079
chr15 66993465 66993470 SP1 TRANSFAC yes 70545080
chr15 66993466 66993471 SP1 TRANSFAC yes 70545081
chr15 66993466 66993472 SP1 TRANSFAC yes 70545082
chr15 66993469 66993474 SP1 TRANSFAC yes 70545083
chr15 66993469 66993476 SP1 TRANSFAC yes 70545084
chr15 66993483 66993498 NFYB JASPAR yes 70545085
chr15 66993485 66993501 NFYA JASPAR yes 70545086
chr15 66993486 66993504 NFYA JASPAR yes 70545087
chr15 66993490 66993494 H1TF2 TRANSFAC yes 70545088
chr15 66993490 66993494 NFE TRANSFAC yes 70545089
chr15 66993490 66993494 SRF TRANSFAC yes 70545090
chr15 66993502 66993517 ZIC3 JASPAR yes 70545091
chr15 66993503 66993515 TFAP2A JASPAR yes 70545092
chr15 66993503 66993515 TFAP2B JASPAR yes 70545093
chr15 66993503 66993515 TFAP2C JASPAR yes 70545094
chr15 66993503 66993516 TFAP2A JASPAR yes 70545095
chr15 66993503 66993516 TFAP2B JASPAR yes 70545096
chr15 66993503 66993516 TFAP2C JASPAR yes 70545097
chr15 66993504 66993513 TFAP2A JASPAR yes 70545098
chr15 66993507 66993522 NR2C2 JASPAR yes 70545099
chr15 66993508 66993518 SP1 JASPAR yes 70545100
chr15 66993508 66993518 ZNF740 JASPAR yes 70545101
chr15 66993508 66993522 PLAG1 JASPAR yes 70545102
chr15 66993509 66993523 PLAG1 JASPAR yes 70545103
chr15 66993510 66993520 SP1 JASPAR yes 70545104
chr15 66993511 66993520 SP1 TRANSFAC yes 70545105
chr15 66993511 66993521 SP1 JASPAR yes 70545106
chr15 66993512 66993522 SP1 JASPAR yes 70545107
chr15 66993513 66993519 MAZ TRANSFAC yes 70545108
chr15 66993513 66993523 SP1 JASPAR yes 70545109
chr15 66993519 66993524 SP1 TRANSFAC yes 70545110
chr15 66993534 66993544 MZF1 JASPAR yes 70545111
chr15 66993537 66993543 SP1 TRANSFAC yes 70545112
chr15 66993548 66993566 NFYA JASPAR yes 70545113
chr15 66993552 66993556 H1TF2 TRANSFAC yes 70545114
chr15 66993552 66993556 NFE TRANSFAC yes 70545115
chr15 66993552 66993556 SRF TRANSFAC yes 70545116
SNP sites on vista20400[chr15:66993287-66993569]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 66993324 rs373949045 C G
E2F1 POLR2A TCF7L2 ZIC1 ZIC4
4039155
chr15 66993408 rs371998583 T C
E2F1 POLR2A TCF7L2 THAP1
4039156
chr15 66993517 rs1022234221 A AG
E2F1 MAZ NR2C2 PLAG1 POLR2A SP1 TCF7L2 ZIC3 ZNF740
4039157
chr15 66993517 rs375258036 AG A
E2F1 MAZ NR2C2 PLAG1 POLR2A SP1 TCF7L2 ZIC3 ZNF740
4039158
chr15 66993517 rs572295197 A AG
E2F1 MAZ NR2C2 PLAG1 POLR2A SP1 TCF7L2 ZIC3 ZNF740
4039159
Genes possibly regulated by vista20400[chr15:66993287-66993569]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 66994566 67074338 + SMAD6 ENSG00000137834.10 66994566 0.89 0.99 14050 99003
Expression level of Genes
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miRNAs possibly regulated by vista20400[chr15:66993287-66993569]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results