EnhancerDB
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  3. vista20407[chr15:67325888-67326210]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20407[chr15:67325888-67326210]
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Tissue distribution of vista20407
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Transcription factor that possibly regulate vista20407[chr15:67325888-67326210]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 67325889 67325903 EBF1 JASPAR yes 24199363
chr15 67325889 67325903 EBF1 JASPAR yes 70545402
chr15 67325903 67325909 ZNF354C JASPAR yes 24199364
chr15 67325903 67325909 ZNF354C JASPAR yes 70545403
chr15 67325909 67325921 HINFP JASPAR yes 24199365
chr15 67325909 67325921 HINFP JASPAR yes 70545404
chr15 67325909 67325930 REST JASPAR yes 24199366
chr15 67325909 67325930 REST JASPAR yes 70545405
chr15 67325911 67325922 ESRRA JASPAR yes 24199367
chr15 67325911 67325922 ESRRA JASPAR yes 70545406
chr15 67325920 67325924 LFA1 TRANSFAC yes 24199368
chr15 67325920 67325924 LFA1 TRANSFAC yes 70545407
chr15 67325981 67325994 SMAD2 JASPAR yes 24199369
chr15 67325981 67325994 SMAD2 JASPAR yes 70545408
chr15 67325997 67326002 SP1 TRANSFAC yes 24199370
chr15 67325997 67326002 SP1 TRANSFAC yes 70545409
chr15 67326000 67326005 SP1 TRANSFAC yes 24199371
chr15 67326000 67326005 SP1 TRANSFAC yes 70545410
chr15 67326002 67326016 GLIS3 JASPAR yes 24199372
chr15 67326002 67326016 GLIS3 JASPAR yes 70545411
chr15 67326005 67326020 HSF1 JASPAR yes 24199373
chr15 67326005 67326020 HSF1 JASPAR yes 70545412
chr15 67326044 67326055 NRF1 JASPAR yes 24199374
chr15 67326044 67326055 NRF1 JASPAR yes 70545413
chr15 67326060 67326075 HSF1 JASPAR yes 24199375
chr15 67326060 67326075 HSF1 JASPAR yes 70545414
chr15 67326066 67326077 TFAP2A JASPAR yes 24199376
chr15 67326066 67326077 TFAP2A JASPAR yes 70545415
chr15 67326125 67326136 ELK4 JASPAR yes 24199377
chr15 67326125 67326136 FLI1 JASPAR yes 24199378
chr15 67326125 67326136 ELK4 JASPAR yes 70545416
chr15 67326125 67326136 FLI1 JASPAR yes 70545417
chr15 67326126 67326136 ETV6 JASPAR yes 24199379
chr15 67326126 67326136 GABPA JASPAR yes 24199380
chr15 67326126 67326136 ETV6 JASPAR yes 70545418
chr15 67326126 67326136 GABPA JASPAR yes 70545419
chr15 67326126 67326139 ELF1 JASPAR yes 24199381
chr15 67326126 67326139 ELF1 JASPAR yes 70545420
chr15 67326127 67326134 SPI1 JASPAR yes 24199382
chr15 67326127 67326134 SPI1 JASPAR yes 70545421
chr15 67326127 67326135 EHF JASPAR yes 24199383
chr15 67326127 67326135 EHF JASPAR yes 70545422
chr15 67326129 67326136 SPIB JASPAR yes 24199384
chr15 67326129 67326136 SPIB JASPAR yes 70545423
chr15 67326182 67326194 ZBTB7A JASPAR yes 24199385
chr15 67326182 67326194 ZBTB7A JASPAR yes 70545424
chr15 67326183 67326195 ZBTB7B JASPAR yes 24199386
chr15 67326183 67326195 ZBTB7C JASPAR yes 24199387
chr15 67326183 67326195 ZBTB7B JASPAR yes 70545425
chr15 67326183 67326195 ZBTB7C JASPAR yes 70545426
chr15 67326184 67326200 ZNF143 JASPAR yes 24199388
chr15 67326184 67326200 ZNF143 JASPAR yes 70545427
chr15 67326188 67326193 MYC TRANSFAC yes 24199389
chr15 67326188 67326193 MYC TRANSFAC yes 70545428
chr15 67326191 67326205 ZIC1 JASPAR yes 24199390
chr15 67326191 67326205 ZIC1 JASPAR yes 70545429
chr15 67326191 67326206 ZIC3 JASPAR yes 24199391
chr15 67326191 67326206 ZIC3 JASPAR yes 70545430
chr15 67326195 67326201 SP1 TRANSFAC yes 24199392
chr15 67326195 67326201 SP1 TRANSFAC yes 70545431
SNP sites on vista20407[chr15:67325888-67326210]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 67325903 rs73479563 A C
EBF1 ZNF354C
4043026
chr15 67326053 rs114585233 C G
NRF1
4043027
chr15 67326074 rs542878977 G A
HSF1 TFAP2A
4043028
chr15 67326114 rs559402872 C T no 4043029
chr15 67326140 rs266339 T C no 4043030
chr15 67326194 rs266340 T C
ZBTB7A ZBTB7B ZBTB7C ZIC1 ZIC3 ZNF143
4043031
Genes possibly regulated by vista20407[chr15:67325888-67326210]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 67356101 67487533 + SMAD3 ENSG00000166949.11 67356101 0.69 1.0 14051 70109
Expression level of Genes
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miRNAs possibly regulated by vista20407[chr15:67325888-67326210]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results