EnhancerDB
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  3. vista20408[chr15:67341124-67341334]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20408[chr15:67341124-67341334]
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Tissue distribution of vista20408
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Transcription factor that possibly regulate vista20408[chr15:67341124-67341334]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 67341046 67341486 TCF12 UCSC Txn Factor no Conserved 108148873
chr15 67341056 67341502 EP300 UCSC Txn Factor no Conserved 108148881
chr15 67341137 67341444 FOSL2 UCSC Txn Factor no Conserved 108148901
chr15 67341156 67341384 FOXA1 UCSC Txn Factor no Conserved 108148908
chr15 67341160 67341388 FOXA2 UCSC Txn Factor no Conserved 108148910
chr15 67341168 67341453 CEBPB UCSC Txn Factor no Conserved 108148914
chr15 67341107 67341127 TP53 JASPAR yes 24201890
chr15 67341107 67341127 TP53 JASPAR yes 70545432
chr15 67341110 67341128 TP53 JASPAR yes 24201891
chr15 67341110 67341128 TP73 JASPAR yes 24201892
chr15 67341110 67341128 TP53 JASPAR yes 70545433
chr15 67341110 67341128 TP73 JASPAR yes 70545434
chr15 67341111 67341131 TP53 JASPAR yes 24201893
chr15 67341111 67341131 TP53 JASPAR yes 70545435
chr15 67341112 67341127 TP53 JASPAR yes 24201894
chr15 67341112 67341127 TP53 JASPAR yes 70545436
chr15 67341147 67341162 TFAP2A JASPAR yes 24201895
chr15 67341147 67341162 TFAP2A JASPAR yes 70545437
chr15 67341157 67341177 ESR1 JASPAR yes 24201896
chr15 67341157 67341177 ESR1 JASPAR yes 70545438
chr15 67341165 67341176 EBF1 JASPAR yes 24201897
chr15 67341165 67341176 EBF1 JASPAR yes 70545439
chr15 67341170 67341190 TP53 JASPAR yes 24201898
chr15 67341170 67341190 TP53 JASPAR yes 70545440
chr15 67341172 67341176 LFA1 TRANSFAC yes 24201899
chr15 67341172 67341176 LFA1 TRANSFAC yes 70545441
chr15 67341213 67341219 SP1 TRANSFAC yes 24201900
chr15 67341213 67341219 SP1 TRANSFAC yes 70545442
chr15 67341213 67341223 SP1 JASPAR yes 24201901
chr15 67341213 67341223 SP1 JASPAR yes 70545443
chr15 67341216 67341227 EBF1 JASPAR yes 24201902
chr15 67341216 67341227 EBF1 JASPAR yes 70545444
chr15 67341216 67341232 ZNF143 JASPAR yes 24201903
chr15 67341216 67341232 ZNF143 JASPAR yes 70545445
chr15 67341217 67341228 EBF1 JASPAR yes 24201904
chr15 67341217 67341228 EBF1 JASPAR yes 70545446
chr15 67341232 67341247 FOXP1 JASPAR yes 24201905
chr15 67341232 67341247 FOXP1 JASPAR yes 70545447
chr15 67341237 67341251 GATA2 JASPAR yes 24201906
chr15 67341237 67341251 GATA2 JASPAR yes 70545448
chr15 67341241 67341249 GATA3 JASPAR yes 24201907
chr15 67341241 67341249 GATA5 JASPAR yes 24201908
chr15 67341241 67341249 GATA3 JASPAR yes 70545449
chr15 67341241 67341249 GATA5 JASPAR yes 70545450
chr15 67341245 67341257 FOXI1 JASPAR yes 24201909
chr15 67341245 67341257 FOXI1 JASPAR yes 70545451
chr15 67341270 67341274 LFA1 TRANSFAC yes 24201910
chr15 67341270 67341274 LFA1 TRANSFAC yes 70545452
chr15 67341275 67341279 YY1 TRANSFAC yes 24201911
chr15 67341275 67341279 YY1 TRANSFAC yes 70545453
chr15 67341275 67341286 NFE2 JASPAR yes 24201912
chr15 67341275 67341286 NFE2 JASPAR yes 70545454
chr15 67341276 67341285 JDP2 JASPAR yes 24201913
chr15 67341276 67341285 JDP2 JASPAR yes 70545455
chr15 67341293 67341297 YY1 TRANSFAC yes 24201914
chr15 67341293 67341297 YY1 TRANSFAC yes 70545456
chr15 67341308 67341324 SRF JASPAR yes 24201915
chr15 67341308 67341324 SRF JASPAR yes 70545457
chr15 67341317 67341328 CEBPB JASPAR yes 24201916
chr15 67341317 67341328 CEBPB JASPAR yes 70545458
chr15 67341318 67341323 TFAP2A TRANSFAC yes 24201917
chr15 67341318 67341323 TFAP2A TRANSFAC yes 70545459
chr15 67341318 67341324 MZF1 JASPAR yes 24201918
chr15 67341318 67341324 MZF1 JASPAR yes 70545460
SNP sites on vista20408[chr15:67341124-67341334]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 67341234 rs552665833 G T
CEBPB EP300 FOSL2 FOXA1 FOXA2 FOXP1 TCF12
4043216
chr15 67341262 rs143220800 C T
CEBPB EP300 FOSL2 FOXA1 FOXA2 TCF12
4043217
chr15 67341275 rs565017987 A G
CEBPB EP300 FOSL2 FOXA1 FOXA2 NFE2 TCF12 YY1
4043218
chr15 67341301 rs180872266 G A,C
CEBPB EP300 FOSL2 FOXA1 FOXA2 TCF12
4043219
Genes possibly regulated by vista20408[chr15:67341124-67341334]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 67356101 67487533 + SMAD3 ENSG00000166949.11 67356101 0.69 1.0 14051 85233
chr15 67435072 67439277 - RP11-342M21.2 ENSG00000259202.1 67439277 1.0 1.0 14052 2057
Expression level of Genes
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miRNAs possibly regulated by vista20408[chr15:67341124-67341334]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results