EnhancerDB
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  3. vista20420[chr15:67409139-67409556]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20420[chr15:67409139-67409556]
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Tissue distribution of vista20420
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Transcription factor that possibly regulate vista20420[chr15:67409139-67409556]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 67409089 67409415 EP300 UCSC Txn Factor no Conserved 108149606
chr15 67409093 67409539 RELA UCSC Txn Factor no Conserved 108149607
chr15 67409131 67409143 PROX1 JASPAR yes 24209660
chr15 67409131 67409143 PROX1 JASPAR yes 70546265
chr15 67409160 67409163 MYB TRANSFAC yes 24209661
chr15 67409160 67409163 MYB TRANSFAC yes 70546266
chr15 67409170 67409182 PBX1 JASPAR yes 24209662
chr15 67409170 67409182 PBX1 JASPAR yes 70546267
chr15 67409183 67409194 HOXC12 JASPAR yes 24209663
chr15 67409183 67409194 HOXC12 JASPAR yes 70546268
chr15 67409184 67409194 HOXC10 JASPAR yes 24209664
chr15 67409184 67409194 HOXD11 JASPAR yes 24209665
chr15 67409184 67409194 HOXC10 JASPAR yes 70546269
chr15 67409184 67409194 HOXD11 JASPAR yes 70546270
chr15 67409187 67409197 NFKB1 JASPAR yes 24209666
chr15 67409187 67409197 NFKB1 JASPAR yes 70546271
chr15 67409226 67409241 HNF4G JASPAR yes 24209667
chr15 67409226 67409241 NR2C2 JASPAR yes 24209668
chr15 67409226 67409241 HNF4G JASPAR yes 70546272
chr15 67409226 67409241 NR2C2 JASPAR yes 70546273
chr15 67409227 67409241 NR2F1 JASPAR yes 24209669
chr15 67409227 67409241 RXRB JASPAR yes 24209670
chr15 67409227 67409241 RXRG JASPAR yes 24209671
chr15 67409227 67409241 NR2F1 JASPAR yes 70546274
chr15 67409227 67409241 RXRB JASPAR yes 70546275
chr15 67409227 67409241 RXRG JASPAR yes 70546276
chr15 67409227 67409242 HNF4A JASPAR yes 24209672
chr15 67409227 67409242 HNF4A JASPAR yes 70546277
chr15 67409232 67409243 ESRRA JASPAR yes 24209673
chr15 67409232 67409243 ESRRA JASPAR yes 70546278
chr15 67409232 67409245 NR2F1 JASPAR yes 24209674
chr15 67409232 67409245 NR2F1 JASPAR yes 70546279
chr15 67409234 67409242 NR4A2 JASPAR yes 24209675
chr15 67409234 67409242 NR4A2 JASPAR yes 70546280
chr15 67409236 67409240 ESR1 TRANSFAC yes 24209676
chr15 67409236 67409240 ESR1 TRANSFAC yes 70546281
chr15 67409241 67409262 ZNF263 JASPAR yes 24209677
chr15 67409241 67409262 ZNF263 JASPAR yes 70546282
chr15 67409242 67409252 TBX21 JASPAR yes 24209678
chr15 67409242 67409252 TBX21 JASPAR yes 70546283
chr15 67409242 67409253 TBX20 JASPAR yes 24209679
chr15 67409242 67409253 TBX2 JASPAR yes 24209680
chr15 67409242 67409253 TBX20 JASPAR yes 70546284
chr15 67409242 67409253 TBX2 JASPAR yes 70546285
chr15 67409242 67409255 EOMES JASPAR yes 24209681
chr15 67409242 67409255 EOMES JASPAR yes 70546286
chr15 67409243 67409253 TBR1 JASPAR yes 24209682
chr15 67409243 67409253 TBR1 JASPAR yes 70546287
chr15 67409245 67409256 NFE2L2 JASPAR yes 24209683
chr15 67409245 67409256 NFE2L2 JASPAR yes 70546288
chr15 67409263 67409278 FOXA1 JASPAR yes 24209684
chr15 67409263 67409278 FOXA1 JASPAR yes 70546289
chr15 67409265 67409277 FOXC2 JASPAR yes 24209685
chr15 67409265 67409277 FOXC2 JASPAR yes 70546290
chr15 67409265 67409279 FOXF2 JASPAR yes 24209686
chr15 67409265 67409279 FOXF2 JASPAR yes 70546291
chr15 67409266 67409274 FOXG1 JASPAR yes 24209687
chr15 67409266 67409274 FOXG1 JASPAR yes 70546292
chr15 67409266 67409277 FOXC1 JASPAR yes 24209688
chr15 67409266 67409277 FOXC1 JASPAR yes 70546293
chr15 67409267 67409278 FOXA1 JASPAR yes 24209689
chr15 67409267 67409278 FOXA1 JASPAR yes 70546294
chr15 67409268 67409276 GATA3 JASPAR yes 24209690
chr15 67409268 67409276 GATA3 JASPAR yes 70546295
chr15 67409297 67409307 RELA JASPAR yes 24209691
chr15 67409297 67409307 RELA JASPAR yes 70546296
chr15 67409297 67409308 NFKB1 JASPAR yes 24209692
chr15 67409297 67409308 NFKB1 JASPAR yes 70546297
chr15 67409298 67409308 NFKB1 JASPAR yes 24209693
chr15 67409298 67409308 RELA JASPAR yes 24209694
chr15 67409298 67409308 REL JASPAR yes 24209695
chr15 67409298 67409308 NFKB1 JASPAR yes 70546298
chr15 67409298 67409308 RELA JASPAR yes 70546299
chr15 67409298 67409308 REL JASPAR yes 70546300
chr15 67409303 67409309 MZF1 JASPAR yes 24209696
chr15 67409303 67409309 MZF1 JASPAR yes 70546301
chr15 67409312 67409323 FLI1 JASPAR yes 24209697
chr15 67409312 67409323 FLI1 JASPAR yes 70546302
chr15 67409312 67409325 ELF3 JASPAR yes 24209698
chr15 67409312 67409325 ELF3 JASPAR yes 70546303
chr15 67409313 67409323 ETV6 JASPAR yes 24209699
chr15 67409313 67409323 ETV6 JASPAR yes 70546304
chr15 67409313 67409324 ELF5 JASPAR yes 24209700
chr15 67409313 67409324 ELF5 JASPAR yes 70546305
chr15 67409314 67409321 SPI1 JASPAR yes 24209701
chr15 67409314 67409321 SPI1 JASPAR yes 70546306
chr15 67409314 67409322 EHF JASPAR yes 24209702
chr15 67409314 67409322 EHF JASPAR yes 70546307
chr15 67409321 67409328 ETS1 TRANSFAC yes 24209703
chr15 67409321 67409328 ETS1 TRANSFAC yes 70546308
chr15 67409325 67409337 YY1 JASPAR yes 24209704
chr15 67409325 67409337 YY1 JASPAR yes 70546309
chr15 67409369 67409381 YY1 JASPAR yes 24209705
chr15 67409369 67409381 YY1 JASPAR yes 70546310
chr15 67409377 67409388 STAT1 JASPAR yes 24209706
chr15 67409377 67409388 STAT3 JASPAR yes 24209707
chr15 67409377 67409388 STAT1 JASPAR yes 70546311
chr15 67409377 67409388 STAT3 JASPAR yes 70546312
chr15 67409390 67409396 HiNF-A TRANSFAC yes 24209708
chr15 67409390 67409396 HiNF-A TRANSFAC yes 70546313
chr15 67409406 67409410 LFA1 TRANSFAC yes 24209709
chr15 67409406 67409410 LFA1 TRANSFAC yes 70546314
chr15 67409409 67409413 YY1 TRANSFAC yes 24209710
chr15 67409409 67409413 YY1 TRANSFAC yes 70546315
chr15 67409410 67409430 TP53 JASPAR yes 24209711
chr15 67409410 67409430 TP53 JASPAR yes 70546316
chr15 67409460 67409474 NR2F1 JASPAR yes 24209712
chr15 67409460 67409474 NR2F1 JASPAR yes 70546317
chr15 67409469 67409473 ESR1 TRANSFAC yes 24209713
chr15 67409469 67409473 ESR1 TRANSFAC yes 70546318
chr15 67409491 67409508 BCL6B JASPAR yes 24209714
chr15 67409491 67409508 BCL6B JASPAR yes 70546319
chr15 67409510 67409518 OTX2 JASPAR yes 24209715
chr15 67409510 67409518 OTX2 JASPAR yes 70546320
chr15 67409532 67409536 YY1 TRANSFAC yes 24209716
chr15 67409532 67409536 YY1 TRANSFAC yes 70546321
chr15 67409556 67409569 POU3F3 JASPAR yes 24209717
chr15 67409556 67409569 POU3F3 JASPAR yes 70546322
chr15 67409556 67409570 POU1F1 JASPAR yes 24209718
chr15 67409556 67409570 POU1F1 JASPAR yes 70546323
SNP sites on vista20420[chr15:67409139-67409556]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 67409222 rs143847528 G C
EP300 RELA
4044058
chr15 67409342 rs146832947 A G
EP300 RELA
4044059
chr15 67409381 rs115425490 C G
EP300 RELA STAT1 STAT3 YY1
4044060
chr15 67409422 rs115791232 T C
RELA TP53
4044061
chr15 67409441 rs76791518 G T
RELA
4044062
chr15 67409444 rs140726493 G A
RELA
4044063
Genes possibly regulated by vista20420[chr15:67409139-67409556]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 67356101 67487533 + SMAD3 ENSG00000166949.11 67356101 0.69 1.0 14051 46962
chr15 67435072 67439277 - RP11-342M21.2 ENSG00000259202.1 67439277 1.0 1.0 14052 70279
Expression level of Genes
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miRNAs possibly regulated by vista20420[chr15:67409139-67409556]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results